| Gene ID | Annotation |
|---|---|
| Am01G045190.1 | Signal recognition particle, SRP54 subunit protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G045190.1 | mRNA | Chr01 | 226742115 | 226746210 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00448.25 | SRP54 | 102 | 296 | 6.10E-79 |
| PF02978.22 | SRP_SPB | 330 | 429 | 4.70E-28 |
| PF02881.22 | SRP54_N | 6 | 83 | 1.30E-15 |
| PF02492.22 | cobW | 103 | 254 | 2.30E-06 |
| Gene family | Subfamily |
|---|---|
| Transporter family | IISP |
| GO term | Description | Category |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | Cellular Component |
| GO:0003924 | GTPase activity | Molecular Function |
| GO:0005525 | GTP binding | Molecular Function |
| GO:0005829 | cytosol | Cellular Component |
| GO:0016887 | ATP hydrolysis activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036225 | SRP/SRP receptor, N-terminal |
| IPR036891 | Signal recognition particle, SRP54 subunit, M-domain superfamily |
| IPR004125 | Signal recognition particle, SRP54 subunit, M-domain |
| IPR000897 | Signal recognition particle, SRP54 subunit, GTPase domain |
| IPR006325 | Signal recognition particle, SRP54 subunit, eukaryotic |
| IPR022941 | Signal recognition particle, SRP54 subunit |
| IPR042101 | Signal recognition particle SRP54, N-terminal domain superfamily |
| IPR013822 | Signal recognition particle SRP54, helical bundle |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003593 | AAA+ ATPase domain |
| trEMBL term | Description |
|---|---|
| A0AAN9Q7V1 | _ |
| SwissProt term | Description |
|---|---|
| SR542_SOLLC | Signal recognition particle subunit SRP54 2 |
| KO | Description | Enzyme |
|---|---|---|
| K03106 | signal recognition particle subunit SRP54 | [EC: 3.6.5.4] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G48900 | Signal recognition particle, SRP54 subunit protein |
| Medicago sativa L. | MsG0780040157.01.T01 | _ |
| Oryza sativa L. | LOC_Os01g56600.1 | signal recognition particle 54 kDa protein, putative, expressed |
| Cucumis sativus L. | Csa003026 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000481s00027086.1 | _ |
| Codonopsis lanceolata | Cl_chr04_20990T | _ |
| Arachis hypogaea L. | AH18G00540.1 | Signal recognition particle 54 kDa protein 2 like |