Gene detail

Detail information of Am01G044010.1 Annotation

Gene ID	Annotation
Am01G044010.1	Homeodomain-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G044010.1	mRNA	Chr01	223474107	223476805	-

Sequences

CDS:

>Am01G044010.1
ATGACTCGGCGATGCTCTCACTGTAGCAACAACGGCCACAACTCCCGGACATGTCCGTCGAGAGGTGGCGGAGGGGTGAAGTTATTTGGGGTGAGGTTGACGGATGGATCAATAATAAAGAAGAGTGCGAGCATGGGGAATCTAACCCTTTCCTCCGTTCATAATCATTCTTCCTCATTACTCGCCCCGTCGTCGGCTAATCCCAGCTCACCGTGTTGCGAAACACCTCATGAACCAGAAGGTTATTTATCCGATGACTTGGCTCATGCCTCCACCTTCGCCAACCGCCGTGGTGGAGAAAGGAAAAAAGGTGTTCCATGGACTGAAGAAGAACATCGGCGGTTCTTGATCGGTCTCCAGAATCTGGGAAAAGGAGATTGGCGTGGGATAGCACGTAATTATGTTGTGACGAGGACCCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTCATCCGGCAGAGTAATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGCTCCGGATATGTCTTCTGATCCGCCGTCAATGCCAGAAGAACAAGAACTACTTCCACCTTCTGAAAACTCACAACAACCTTTCAATGGAAAATCACAGCCTTCATTAAATCTGTCTCTCAAGTCAGAATTTGATCCCATGGAAACCACCTCTCAAGATAATGTAGAAGAGCCCAATGAAACTACAATGGGATCAAAGGGATCGACACAAATGGCTACTGGATTCTTCCCAACTTATTTACCTGTCCCATTTTCCATATGGCCGTCAATGGGAGGTCCCTTTGAGGAAGTCAATGGAGGAGAAACATCTCCTGATCATCGTCATCAGGTCCTGAAGCCAATCCCGGTCATTCCCAGGGAACCTGTCAATGTTGATGAACTTGTGGGAATGTCTCATCTGAGCATTATGGAAGCACAGGTACTTGACAGAGAGCCTTCCCCTCTTTCCTTAAAATTGTTAGGAGAGCCCTCAAGACAGTCAGCATTCCATGCAAATGCTCCAGTTAATGGTTCCGATTTAAAAAGTGGCGAAAACAGCGCCATTCAAGCAATTTGA

Protein:

Promoter(3k):

>AM01G044010.1
CCGATTTTGGGAAAAAACCAAAATCGGATTTATCTTTTAGTAGGTAAATCTGAGCGAATTTTTTAAGTGAGGGGTATTTTTGGTTTATCAAATTATATGGGGGTATATGGTGATATGATAGGGGTACAAAAAAATATCCCCTGAGTGAATATGGCAACTGCCAAGTGGTTTTACTAATAGACCGAGATAATCGACAAACATTAGGCTAAGTAATCGCCCACTGAGCAGTTACCACAAAAAGACTTAATATAAGCTAATAAGCCGAGAGAAGGGAAGGAAACCAATGACCCATACTTAGACAAAAATTGCTCGGGCTAACTCACTCATAGAGCTTCAAGAGTATTGGCGCCTATAAATCTTCTTCTCACGAGCGACCACACTACTTTCTGCTCTAACTCGGAGGGTCAGTTAACTCCGTGTTGACTCAGATCAGTCATCTCTACATTCATCCTCCAAAGACTGCACTTTAACTATGTCCAACGATACTTTTAACTCCGCTTGCATCAGGGTAGGTGTCCAATGTGAACCTTTCAGTTCTTTGATCCATTCACTCTATTTGTCCGTCATTAGTCTCGATGACCGAGTTCCTCCCAAAATAATTATGGCATTTTGGTCTCTTTTGGACCGTTTGAACAATATTGTGTTACCGTGACACATTCCCGTCGAACGTAATCTTAGACTCTATTTGGCAATGTCAATCTGCTAGCTTATAACATATAGTTTATAACGGATAAATGTAAGTGTTTGGCATGACTAGCTTATAACATTTTTAGTAGCTTATAGTATTTTTTTTAAATGCTACTTAAAGTAACACTTGAGCTTATAGTTTTTAACATTTCTTTTTTCTTCTCATTTTTAGCCTTGTTACTTTAATTAAATTTCATATTTATCCTTCATTTAAATGAATACTCTCTCTCATATTTAAATTTTAATTACAGATTGTTTTTTTTTTTGAGATTATTTATGCACGAATACTCTCTCTCTCGAGTTCTCGACCATTCCAACTTTTTGTAAACCAAAAAAAATACTCGCCATAATTATTTTTTTACATTATGTTTTTCGCTAATTTATAGGACATTACTTTTCCCATTATAAATGTGCAATTTAACAAAGGCTAAATTGCACATTTGGTCATTTATCTTTGACTTAAGTTTCATTTTGGTCATTTATCTTTTTCTTCTCTCGTTTTGGTCTTTTATCTTTCATTTCTGTGTCAGTTTGGTCCATTTTTTTCTCACTTTGGTCCTTTATCTTTCATTTTTGTTTCGGTTTGGTCCTTATAAACAGAAATACAGAAAAATGACGAACACTATGAATGTGCTCAAGAACACCAAGAACACTTCGATTTCTTGTTTCTTGAATAACTCTTGCAATACGCGACCAAATTGAATTAAATTAGACTCTAACTTGAATAACATTTCACAAGGAATTCAATGGAACCAAAATTAAGCTCAGAAAAGTGCTTATGCGCAAAATTACTTATGGAACCGAAATCTTGAATTTGAAGTTCAAAAAATCTTCAATCTCAACAATGGTGATTTTGCTATAGAGCACCAAACTGAACGATTCTTGGGCCTAAAAAAATGCTCAAAATTCAACAAGGAATCAGAATATGACAAGTATTTTGTTCAGTAAAGTGCGTAAAACGCAAACACGGTCAAAAAGCAATTCACATCTATAAAACGTGTTTTGGCTCTTATTTGCTCATTTCTCAACCAATTTGCGTCAAACCAATTGTGTTCAACTTGTATTGAGTGCAGAAATCGAACTTTAGCAAAAGGTTTCAACAAAAACGATGAAAATTCGAGAACGATGTGAAAAACATAAACCTTCATTCGCGTTTCTATTCTTCACATCGTTATCGAATTTGCATCGTTTTCGTTAAAACCTTTTGCTTTATTTCAATTTCTGCAGTCAGTACAAGTTGAACGCAATTTGTTTGTCGAAAATTGGTTGAGAAATGAGCAAATAAGAGGCAAAACACGTTTTAGAGATGCAAATTGATTTTTCACAGTATTTTGCGTTTTAGCGCTTTACTAAATAAAATGTTTGCCATATTATGATTTCTTGTTGAATTTCGAGCATTTTAGGCTCAAGATTCGTTCAATTTGGTGCTCTATAACAAAATCGCCATTAATAAGATTGAAGGTTTTTTGAACTTCAAATTCAAGAATTCGGTTACAAAAGTGATTTTACGCATAAGCATTTTTTCGAGCTTAATTTTGGTTTCATTGAATTCCTTGTGAAATTTTATTCAAGTTAGAGTCCAGTTTTATTCAATTTGGTCGTGTATTGCATGAGTTATTTAAGAAACAAGAAATCAAAGTGTTTTTGTTGTTATTGAACACATTCATGGTGTTTTTCATTTTACTGTATTTTTGTTTAAAAGGACCAAACCGAAATAAAAATGAAAGATAAAAGACCAAAGTGAGAAAAAAGATAAATGACCAAACTGACACAGAAATGAAAGATAAAAGACCAAAACGAGAAAATAAAGATAAAAGATCAAAATGAAACCTAAGTCAAAAATAAAGGACCAAAATGCAGTTTAACCTTTTTTTTTTTTGACAAACTGCAATTTAGCCTTTAACAAACTAACTTATAGAGAAAAAGATAATTATTAGTGGCGTCGTAAAGTAGTACAGGAAGCTGTGATAATGTAATGTAGGAAGGGTAAAAGAGTGATTACACCAGAAAAGCAACGAGCGATGGGAAGGTCTTAAATTAGGAAGGGTAAAAGGTCTTAAATTAGAATTCCAGAATTAGCCTTGATGTTGATACAAAAATCCAGAATTATCTAAGAGACACGCTTTTCTTAATTAAGCAAAACACATGCACACACGCACACACTATTTTTTTTAATCTCTAATTTTTATTTCCTATCTATAATCCTACTTTTTCTATAGATATCAAATATCACGTTGTTGTTGTTGTTGTTGTTGTTGTCTTCCTTGAAGGCTGTGATTGCAATTCGACCGAGTCAGGTGGCGGAGAATCAGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	106	151	6.40E-11

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB-related

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0080033	response to nitrite	Biological Process
GO:0009744	response to sucrose	Biological Process
GO:1902679	negative regulation of RNA biosynthetic process	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017884	SANT domain
IPR006447	Myb domain, plants
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A2K3PLB1	_

SwissProt

SwissProt term	Description
MYBS3_ORYSJ	Transcription factor MYBS3

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G16350	Homeodomain-like superfamily protein
Medicago sativa L.	MsG0880046135.01.T01	_
Oryza sativa L.	LOC_Os10g41200.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa009958	_
Glycyrrhiza uralensis Fisch.	Glyur000219s00011597.1	_
Codonopsis lanceolata	Cl_C00004_unscaffolded_00550T	_
Arachis hypogaea L.	AH07G18400.1	MYB-like transcription factor family protein like

Expression pattern