Detail information of Am01G043690.1 Annotation
Gene IDAnnotation
Am01G043690.1 DEA(D/H)-box RNA helicase family protein
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G043690.1mRNAChr01222779145222785714+

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00270.32DEAD1242952.10E-50
PF00271.34Helicase_C3314409.80E-31
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0005634nucleusCellular Component
GO:0005524ATP bindingMolecular Function
GO:0005737cytoplasmCellular Component
GO:0016787hydrolase activityMolecular Function
GO:0003676nucleic acid bindingMolecular Function

InterPro
InterPro termDescription
IPR014014RNA helicase, DEAD-box type, Q motif
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR001650Helicase, C-terminal
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR011545DEAD/DEAH box helicase domain
IPR000629ATP-dependent RNA helicase DEAD-box, conserved site

trEMBL
trEMBL termDescription
A0A8B8KAF8 _

SwissProt
SwissProt termDescription
RH20_ORYSJDEAD-box ATP-dependent RNA helicase 20

KEGG
KODescriptionEnzyme
K12823ATP-dependent RNA helicase DDX5/DBP2[EC: 5.6.2.7]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT1G55150 DEA(D/H)-box RNA helicase family protein
Medicago sativa L.MsG0280011219.01.T01 _
Oryza sativa L. _ _
Cucumis sativus L.Csa016582 _
Glycyrrhiza uralensis Fisch.Glyur000718s00020284.1 _
Codonopsis lanceolataCl_chr02_11820T _
Arachis hypogaea L.AH18G02320.1DEAD-box ATP-dependent RNA helicase 20 like

Expression pattern