Gene detail

Detail information of Am01G042960.1 Annotation

Gene ID	Annotation
Am01G042960.1	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G042960.1	mRNA	Chr01	220612910	220615993	+

Sequences

CDS:

>Am01G042960.1
ATGGCTTCAAATCCAGAAGAAGGATCCAATACCACCCTCATTGCCATTGATAGAGATCATAATAGCCAACGTGCTGTAAAGTGGGCCGTCGATAACCTTTTGCAGAAGAACTCTTTTTGTACCCTCATTCACGTTAGAACCAAAACCTTGAATCCTCATGATTCTGATGCTATTCCTAAACAGGGTCGTTCACCAACCCAAGAAGAATTGCACCAACTTTTTCTTCCTTTTAGAGGATTTTGTGCTCGAAAAGGGATCGTAGCAAAGGAGTTGGTTCTGCATGACCTTGATGTTTCAAGTGCACTTATTGATTACATCATTGACAACTCTATCACCGACGTTGTTGTTGGTGCACCCCGATGGAATCTTCTTATATGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAATTAGGTCTTTGCCAGAGTCTTGCATGGTACATATTGTATCAAAAGGAAGAGTTCAAAGTACTCAACCAACAACTCATCGTTCTCTAAATATTAGTATCCCACAAACAAAATCATTAAAATCAAACAGTTGTAGAAGCAGATCTTCTAAAATATCCCAAAATAACATGGATATAGAAATAAGGAGATTAAAATCAGAACAGAAGAGAACAATAAAGAAGTGTAGATCAGTCAGCAGTGACTCTATTGGTATAAAACATATGGCAATGGAAATTGAAAAGTTCAGGAAGGAAGAACCAAACATAGTAAAAGATAGAACCAGTGTAGATATGGAATCAGCTGAAATGTCAAAAAGCCTTATAGAAATGGAAACTCAAAAGACAAAGCAAGAAGAAGAAGAAGAAGAGAAGAGAGCATTAAATTCAAGTGAAAACAACAAGGTTAAATTTAAAAGATACAATATTACAGAAATTGAAGTTGCAACAGATTACTTTGACATTAATCTCAAAGTTGGTGAAGGTGGATATGGACCTGTTTACAAAGGGGTTCTTGATGACAATGTTGTTGCTGTTAAAGCCTTAAGACCTGACTTAACCCAAGGGGAGAAGCAATTTCATCAAGAGGTCCTTGTTTTGAGCACCATAAGACATCCACACATTGTTGTACTTTTAGGTGCATGTCCAGAGTACGGATGTCTTGTGTACGAGTACTTAGAAAATGGAAGCTTAGAAGACCGACTTTTCGTGAAAGACAACACTCCACCAATTCCGTGGAAAACTCGATTCAAAATCGCGTCAGAGATAGCAACGGGCCTTCTTTTCCTTCACCAGACAAAACCAGAACCAGTTGTACATCGCGATCTTAAACCAGCAAACATTTTGTTAGACAAAAACTATGTGAGTAAAATCACTGATGTTGGTTTGGCAAGGCTAGTTCCTCCTTCCGTGGCGAATAAAACTACGCAGTATCACAAGACGACTGCAGCGGGCACGTTTTGTTATATCGATCCGGAGTATCAACAAACAGGACTATTGGGTGTAAAATCGGATATATATTCATTAGGTGTGATGTTTTTACAGATTATTACTGGAAAACCTCCTATTGGTTTGGCACTTTTGGTTGAAGAGGCTATTGAGAAAGGTGAAGTTGAAGAGGTTCTTGATCCAAATGTGACAGATTGGCCTGTTGAAGAGGCTTTGTCATTTGCTAAATTGGCTTTGAAGTGTTGTGAGATGAGGAAAAGGGATAGACCAGATCTTGCTTCTGTTATTTTGCCTGAGCTTAATCGACTGCGAGATTTATAG

Protein:

Promoter(3k):

>AM01G042960.1
AAGAGATGGTAATTGTGGGTTCCAAGCAGTAGCGGTTGGTCTCGATCTTGGTGAGGATAGTTGGCCTATAGTTAGGCAAGATTTAATCAAAGAAACAAAGGAGAGGGAGCAACTATATAATTACATGTTTGGAAAGGACAGACTTGCAGTGCTTAGAAAAGTGTTATCCATTGAATACCCCGGTTTTCAGAAGGAGGATAAGTGGTTGAGTTTTCCTGAGATGTGGTACTTTATAGCTACTAAGTATAATGTGACCCTAGTTCAATTGTCTTTGGATATGAATTTTACTTATCTTCCTTTGAGATCTAAGTATAAAATCATATCTATTCTGAACGTCGGGGATATCCATTGAATGCATATTTTGATCTCGCCTGTCTGTTCGTTGCCTCCAGTTGCTTTGATGTGGTCTCATAATCGATCAGAGGAATCTACTTCATGGTTGGATCCTCATACCGGCCGTTTTGCCCTTTGGCAGTCTACCGCTCCGGTCATGCCCCGTCTCCCTCCCACTAATGCGCCCACCGTTGTAGACTTAGCTCATGATTCTGACGATTTAGATTGACATTTCTTGTATTTATTATTGTACCCATATTTTTGTAATTATTTATCCATATATATGTATATATATCCAACAAATTAAATGTGTCAAAAAAAAACAAATTAAATGTTTAAATTTTTTTTACAAGTCGGATTTACCCTGGTAAAGGGTAAATTCGTTCTTGAATTTAACAAAGCGGATGTACCCCCACAACAGGTAGATCCGACTTGATAAAGAGACAAAGCGGATCTACCTGTTATGGGGGTACATCCGCTTTGTTAAATTCAAAAGCGGGTTTACCCTTCTATCGGTATATCCGATGCAATTTTTTATGTTTAATCGGATCTAGGTAAATCCGCCTTTGATTAATCTCAAAGCGGATTTACCTATTTATAAGGTAAATCCGATTGAGTCAAAATTATGAGGGGTATTTTGAGATTTTCATATTTTGTGGGGGTATATTGTGATATTATGGGGGTACAAAAAAAACTCTTGGAAAAATCAGTCAAGCCAACTAGGTTGAGCCAAAAAGCCCAAAAAAGTGCAAGGCTTGTACAGTCAATTTTTAGCCCATTTTAACAACTGATTTTTTCAGCTTGATCCAACAAAGTTCGATCCCATATATGTTATAAAATTAATAAAAATTATTCTGATATTTAAGTTATGGGGACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTTATAAAAATATTTATTTTTTTATTTTATTTATTTTCTTATTTTAAAAAGATGTCAACTTTTTTATGCACACACATGCAAATTGTATAAAAAATAAATTATTCTTTCTATTATTTCTTATATAAAATTTTGTAAACAAAAAATAAATAAAAATTAAGGTGCAATAGAAAACTAAAAATAAGATGATACTTTTTTATTATTGTGGATAGTAAAAAAGTCTTTAAAGGCAAATGTTTCAGACTAAACTTCAGCCCATTCCGGTTTTTGGCCGGCCAAAAAGACTCATTTTCTCTATTAGTGCAAGAACCACGCACCCCAGTTGCAATCAATGGTCGAGATCGCCCTAGATCTCATCGTAAGATGATCTTGACCGTGATTATTATCTTGCCAAGTCAGATTCCTCACGTACTTGCATGCGCCTAAAAGGTGAATCTACATCAGCTGACATAGTACCCGACAAATACGCAAGCCAATCATTTGATCGGGTACGCATTTATTACTCACCACCTCATTCTCATTCCTCATGGCTGACTTCCCAAGCGTTGACTGTAGCGTCGGCCTTGTCATTAGTGTCGGCTTTAGCGTGGGCTTAGCCGACGCTAATTAGCGTCGGTCTAAATATACGGGACGCTACAGATTAGCTTCAACCCTTTTAGCGTCCACACGAGGCCGACGCTAATCCGACTCTAACTCACTGTTAGCGTCCATTTCAAGTGTTTTAGCGTGGGCTTCTGGCCTACACTAAAACCTGTTTTTCTAGTAGTGTGTGTGTAGGTACCACCCCCATCAGATCAATGCGGCAGAACAAAACTGAAGGCGGATTTCGGCATCTCTACTCCGTTCGGCCTCACAGACCAAACAACAAATAGTTTTGTTAGATAAATCACAAATAAGTAATACTAAGAAAATAATATTTTTTGAAAAAGTATATGCAGCCTAGACCAAAGAGTCTGCAGTATACATTGGGCTGAGCTTAGGCAACAAATGTTGAGCCATATTTTTGGGCCTATCTTTTCCCACATCCCTTGCTACTCACGCCACACCCCCAAACCCTGCGAAATGACCAATATGTCATTAATGAGGCACCGCTCCGTGTTTTTTCTTTGGAATTTTTACCGATTCGGTTAGTGTCAGCCGAAAACTTACGGTTAGGCACACCCGAACATGTATTTTTTTGAGACACCCCTCTTTTACACTATTCGGTTGACCTCAACCGAAATTTTTCGGTAGGCGTCAACCGAATCCACTAGTTTTCCTTTGTGGGGGTGTTTTTGATTTAATGGTATTTTGGAGATTTAGGAGTTTTGGGGGTGTGGGCTGAGTAGCAAGGGGTGTGGGATAAGTCCGGACCTCATCACACAAGTTTCATAACTCCATTTGCTAAATGTTAATGTTGTTATTCTCATTCCATATATACATATCCAACTATGAATATCTATATGTGAGTGCAATTACAATTGGTTTTACAGTTAGATCCAAGTCATGTATATATGTAGTCAATAAGTGGTCCATTGATAATAATATTTGAAACAAATAATTGTTAACAAAATAACGACCTTCTGATATAACCCAAATTCAACATCCAAAAATAGTAAAAACCTCATACACAAATGTGACATATATTTGGTTATATGTTCTTGTAAAACCATGCATCATTAGTTCTCAATATCGATCTGTCTTCTTCGTCTATGC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	305	558	3.40E-42
PF07714.20	PK_Tyr_Ser-Thr	304	559	2.60E-39
PF00582.29	Usp	13	124	1.90E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.14.2:RLK-Pelle_RLCK-IXb

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016567	protein ubiquitination	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0004842	ubiquitin-protein transferase activity	Molecular Function
GO:0016787	hydrolase activity	Molecular Function

InterPro

InterPro term	Description
IPR006016	UspA
IPR008271	Serine/threonine-protein kinase, active site
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
G7IS26	_

SwissProt

SwissProt term	Description
PUB52_ARATH	U-box domain-containing protein 52

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G12000	Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
Medicago sativa L.	MsG0280011143.01.T01	_
Oryza sativa L.	LOC_Os02g05820.1	protein kinase domain containing protein, expressed
Cucumis sativus L.	Csa012349	_
Glycyrrhiza uralensis Fisch.	Glyur000115s00008256.2	_
Codonopsis lanceolata	Cl_chr08_25140T	_
Arachis hypogaea L.	AH09G09700.1	U-box domain-containing protein 51 like

Expression pattern