| Gene ID | Annotation |
|---|---|
| Am01G041200.1 | NOT2 / NOT3 / NOT5 family |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G041200.1 | mRNA | Chr01 | 215258888 | 215267629 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF04153.21 | NOT2_3_5 | 532 | 656 | 5.50E-33 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000932 | P-body | Cellular Component |
| GO:0003677 | DNA binding | Molecular Function |
| GO:0006355 | regulation of DNA-templated transcription | Biological Process |
| GO:0000786 | nucleosome | Cellular Component |
| GO:0005634 | nucleus | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR007282 | NOT2/NOT3/NOT5, C-terminal |
| IPR040168 | Not2/Not3/Not5 |
| IPR038635 | CCR4-NOT complex subunit 2/3/5, C-terminal domain superfamily |
| trEMBL term | Description |
|---|---|
| A0A1S3E604 | _ |
| SwissProt term | Description |
|---|---|
| VIP2_NICBE | Probable NOT transcription complex subunit VIP2 (Fragment) |
| KO | Description | Enzyme |
|---|---|---|
| K12605 | CCR4-NOT transcription complex subunit 2 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G07705 | NOT2 / NOT3 / NOT5 family |
| Medicago sativa L. | MsG0280010983.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g54120.4 | CCR4-NOT transcription factor, putative, expressed |
| Cucumis sativus L. | Csa020294 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000268s00013383.1 | _ |
| Codonopsis lanceolata | Cl_chr06_25490T | _ |
| Arachis hypogaea L. | AH03G02100.3 | Probable NOT transcription complex subunit VIP2 (Fragment) like |