Detail information of Am01G040880.1 Annotation
Gene IDAnnotation
Am01G040880.1 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G040880.1mRNAChr01214272133214283899-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF02891.23zf-MIZ3614092.60E-19
PF02037.30SAP11427.70E-09
Gene family
Gene familySubfamily
----

Gene Ontology
GO termDescriptionCategory
GO:0000785chromatinCellular Component
GO:0016874ligase activityMolecular Function
GO:0016020membraneCellular Component
GO:0061659ubiquitin-like protein ligase activityMolecular Function
GO:0003677DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR004181Zinc finger, MIZ-type
IPR011011Zinc finger, FYVE/PHD-type
IPR036361SAP domain superfamily
IPR003034SAP domain
IPR031141E3 SUMO-protein ligase SIZ1/2, SP-RING finger

trEMBL
trEMBL termDescription
A0A1S3E8L4 _

SwissProt
SwissProt termDescription
SIZ1_ARATHE3 SUMO-protein ligase SIZ1

KEGG
KODescriptionEnzyme
K22403zinc finger MIZ domain-containing protein

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G60410 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
Medicago sativa L.MsG0480020828.01.T02 _
Oryza sativa L.LOC_Os05g03430.2ATSIZ1/SIZ1, putative, expressed
Cucumis sativus L.Csa017195 _
Glycyrrhiza uralensis Fisch.Glyur000066s00006253.1 _
Codonopsis lanceolataCl_chr06_23710T _
Arachis hypogaea L.AH03G01680.4E3 SUMO-protein ligase SIZ1 like

Expression pattern