Gene detail

Detail information of Am01G040210.1 Annotation

Gene ID	Annotation
Am01G040210.1	xyloglucan endotransglucosylase/hydrolase 32

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G040210.1	mRNA	Chr01	212328255	212330533	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G040210.1
AGACCATTCATTTGTGTTGATGGGTGTCACCTCAAGACCAAATATGGTGGACAGCTAGGTCTCAACAAGACTAGATTTAGTACAAGGATAAAGAGGAGTGTTCTACCTTATACTGGTCCTGGTTCTGACACAAACAAACCACTGGTAGTTGAAGATGATGAAGGAAGCAACAACCATGGGGAATTAACACAAGAGAACGTGGAGTGAAGAATGAAGGAAACAACTTTATGTATTTTGCTAATTAGGAGTTTATGTATTTAGGAAGTGATGTATTTTGCTAATTAACTCAAGTTTATGTACTTAGGAAGTGGTGTATTTAAAACTGAATGTATGGTCTGTACTTGTTTTGGAACATGTTGAACTTGTTTTTAATGAATCAAAGTTTGTTATTATATGTTCAATTCTTGCTCTGTCTCGTTTATGAATCAAAACATGAAATACTGATATGCTACATACAGACCAATTCTTGCTCTGTCTCTGTATATGAATCAAAACATGAAACAGAATTGAGTTAACTTTAAAAACTTCATTGATAATTCAAGTAGAGTTTACATAGATCAGTCACACTAAACCCTTACAATACTGAAATACTGATATGCTACAAACAGACCCAATCCTTACATCCAATACTGATATACTGATATACCCTAAACACTAGTTTTTAACCAAATCAAATTTCTGAAATGCTATAAACATAATGAGTAAAACTAGTATTCCTTGCATCCAACTCTTCTTCTTCCTCTCATCTAACAACTTGAGCTTCAGCCTTGCAATTTTCTTTGACTCCCAATCCTTGAAAATTTCGCCATATTTGCATTGACAGATTGTTTGTTTTGCAGCTTCAGCTTCAAAAGGTTTATGAACTGACACAGCTTGAGCTTCATTTCTTTCTGAAACTGAAACCATGTTCATTGTCTCAACATCTAGTTCATCGTCCCAGATAAACAAGTTGCAGCTTACTCTCTTCTGCACATAAACCAAAATAAAAGAAACAGAAGAATTATTGTAACAAATCCTAAACCAAAATAGCAAAGAGAATATAAGAATTAATATCAAACATCTAACATACCCCCCAGTTAATACACCTCCAAAATCTTCTTCCAGGGTTTTCAGAAGTGTTGGCTATCCATAAATGCATAGCTACCCCACATCCACATACAGGGAGTAAGCCTTGCCTTGATGCAGCATTCGAAGAGACATTGCTTCTTGCCATTGGAGAGATCGAAAGAGGAACAGAGATGAAGAATAAGAAGAGGAACAGAGAAGATGAGCGATGAAGAGGGAAGAATAGGCGTGTTACAGAGATGAAGAAGGTGAGCGTGTGTGAGATGATGATATAAGCCCTATTGCCACGTAATAAGCACAGGTGTCATCCACGTCAGATTAGAGTTAACTCTGTTAACAAAAACTAACAGTAGGGGTTTAACTACAAACGGTGTGTATTTACAAGGGTTATTTTAAAAAAAAAAAAAAATTGCAGGGACTTAAATGGATTTTGGCCAAATTTGCAGGGGCTTAACATATATTTAAGCCTTGATAGTTATAATTTTTGAAAACTACTATCTAAAAAAATAAGAAGGCTTAATGACTATTTAAACTGATTAATATTTAAAACACACGCGACAAATATTTGTCACTAATACCTAAAAAATGACAAATAATTGTTACTCATTTATAAAAAATCACGGGATAAATATTTGTTATTCATAATCTACTATCTATCTTTTACTATCTACAATAATCTACTACTAATGAACTCAAATAATCAATTGAAACTATGAGATAACTGCACTGATACATAAAAAAAACACTGGACAACTGCACTGATATATAAAAAAATATAGGGATAACTGCAATAATAAATATAAAAACACAGGATAGTTGCATGATATATAGAAAAAACATGGGATAACAACACTGATATATAAAAAAATATTGCATTGATATATAAAAACATATGGAATAAATGCACATATTGTTTTTAAATGGTACTTTTACATTTTTAGTTTTAATATTTATCAATTTTTTCTTTGAAACTCTTTTTTTATCTACTTTAAATTTTTCTTTATTTTCACGAGGTAATGTTCAGATTATTTAGATACTGTCTAAATTCATTCATAAAAAGAACACGACAGCACCTGTCCGTATGCAAGTCATCCTCTATATTTTACAATTGATTTTAGATTAATGAGATTTCAAATTAACGTTTTTTATTTGAGGTAGTCGTATCACGTAACGCGATCGGCCCGTGCGGAAGCACGGGCATAGTACTAGTTCAATAGAATAGAATATGGTGAGTGTTGTTATTTCTTTCAACACACTGCCAATTAGGAGATAAAAGATTGTGAAAAAATAAATTAGTAACTAGAGGAACTAAATTCATTCATTTCTTTTTTGGTCGGGCCGACAAGCGCCACGACCTAACACATATACAAACTGGAAAACCAAGGCTCGACACTCAGGGGGGTCGAACTCAGCATCCGGTGTCCATAAACGACATTTCTACCGCTGCGACAAATCAGCCTCAGACTGAATCTATAAAAATATGTATAATATTTAGAGATTTATTAAGGAAATTTGAACATATCTAAAGTTATATCAGCAATCTTTGTCAATGTCACATGGCTGAAGGTAATCAAATAAATTTCACCAAGAAAACCACTAGGGTGGGTGTCTCTCATCATTCATATTTTCCTTTCCAACTGATACAGGGTAATAAACATCTATTCACTTGAAAGGCAAGTTCCTACCCAATAAGTAATAAAATTGAAAAGAAAAAAGCCACACCAAAAGCTAAAATGTTTCCCCATCTTTGTTTATTAAATCAAAAACTTTTGTCGCCATGTATAATTCCCCAATCAATCAAATTAACTCAACTTTGGTACAAATGGGCCATCCAAATCTCTCTATATATCAATCACATACTCATATTCTTCCATGATCATTGATCACCAACTCTGCCTCTTACTTTCTCTGTTAACTCTGGTTTCTAGCACTACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00722.24	Glyco_hydro_16	45	226	2.70E-54
PF06955.15	XET_C	261	297	1.80E-13

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GH16

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0071555	cell wall organization	Biological Process
GO:0042546	cell wall biogenesis	Biological Process
GO:0009835	fruit ripening	Biological Process
GO:0016998	cell wall macromolecule catabolic process	Biological Process

InterPro

InterPro term	Description
IPR010713	Xyloglucan endo-transglycosylase, C-terminal
IPR016455	Xyloglucan endotransglucosylase/hydrolase
IPR000757	Glycoside hydrolase family 16
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
IPR044791	Beta-glucanase/XTH

trEMBL

trEMBL term	Description
A0AAN9I236	_

SwissProt

SwissProt term	Description
XTH32_ARATH	Probable xyloglucan endotransglucosylase/hydrolase protein 32

KEGG

KO	Description	Enzyme
K08235	xyloglucan:xyloglucosyl transferase	[EC: 2.4.1.207]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G36870	xyloglucan endotransglucosylase/hydrolase 32
Medicago sativa L.	MsG0780040987.01.T01	_
Oryza sativa L.	LOC_Os07g29750.1	glycosyl hydrolases family 16, putative, expressed
Cucumis sativus L.	Csa017160	_
Glycyrrhiza uralensis Fisch.	Glyur000093s00009403.1	_
Codonopsis lanceolata	Cl_chr06_13620T	_
Arachis hypogaea L.	AH13G02580.1	Probable xyloglucan endotransglucosylase/hydrolase protein 32 like

Expression pattern