| Gene ID | Annotation |
|---|---|
| Am01G040130.1 | _ |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G040130.1 | mRNA | Chr01 | 212148917 | 212154309 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF10220.12 | Smg8_Smg9 | 38 | 181 | 6.30E-69 |
| PF10220.12 | Smg8_Smg9 | 534 | 670 | 6.30E-69 |
| PF10220.12 | Smg8_Smg9 | 1044 | 1173 | 6.30E-69 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Biological Process |
| GO:0016020 | membrane | Cellular Component |
| InterPro term | Description |
|---|---|
| IPR019354 | Nonsense-mediated mRNA decay factor SMG8/SMG9 |
| IPR028802 | Nonsense-mediated mRNA decay factor SMG8 |
| trEMBL term | Description |
|---|---|
| A0A1S2XDA5 | _ |
| SwissProt term | Description |
|---|---|
| SMG8_BOVIN | Nonsense-mediated mRNA decay factor SMG8 |
| KO | Description | Enzyme |
|---|---|---|
| K18734 | protein SMG8 |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | _ | _ |
| Medicago sativa L. | MsG0280010439.01.T02 | _ |
| Oryza sativa L. | LOC_Os02g57780.1 | expressed protein |
| Cucumis sativus L. | Csa015150 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000664s00026060.1 | _ |
| Codonopsis lanceolata | Cl_chr06_13350T | _ |
| Arachis hypogaea L. | AH18G04990.2 | Protein smg8 like |