Gene detail

Detail information of Am01G039690.1 Annotation

Gene ID	Annotation
Am01G039690.1	C-repeat-binding factor 4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G039690.1	mRNA	Chr01	210507764	210508453	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G039690.1
CTTGAGTCAGTATTTTGCTGGTTTTCTGTATCATTTATGGACTGATTAACACAAGGTTTAAAATCTGATAATTATGAGTTTAAAGTTAGATTTCTGTGCCTTTGATATGAGTCTGTTGTGCACTCAATTCCCAAGTTGCTATGCCTGTAAGAGATGGACAAGTATTTCTTTGTTGGTTAATACGGATAAATATGTCAAGTGTCAGTTTCATGTTAGTTTTCTATTAACATGAGATTTCATGTTACTCTTAGCTTTCACAAATTGCTGCCACTGATATCAACATTTTTCTGATAATTGTTGTTCAATATTGGTACTTTATTGGTTGGTTGCAATTGAATTGACTAACAAAGCAAGAATGTGTTGTATTTCAGACGGACAGTAAAGAACATTCCAAAATATGCGCTTGCACAATTTTACATCGACAATGTTCTGCCCCGCGTCAAGGAGAAGAAGATTATGGCTCTGAAACCCTTTGTTGATAGGCTAGGGGTAGGCCAAGGATAATATAATTTGGTTAAAGTTACATAATTTAGTATAAGACTTTGATTTATTCTAATTTTGTTAATAGGTGTACTTTGACTTTAGTGGTTTAATGTTTGTGCTTGATCAAGTTATTATTTGAACATTGGCAACTGTTATGTGCTCCGATTATTTTAATGCAAGTCTTCTTTTTTGAATATATTAAATAGTATTTTGGAGGTATAATTTAATTTTTTTAAAAAATTTCCGACGGATTTGCGACGGTTTTGTGAAGAAAAGTTGTCAGAGTTTGCGACGACTTTGCCACGGATATTTGCGACGGACTTGCGACGAGTTTGCGACGGATTATTTGCGACGGGGAGTTTCGTCGCAAATGCTTTGCGACGAGCTGTTTTGCCACGACTCTTCGTCCGTCGCAACTTCCGTCGCAAATTCACATTTGCCACGGAAAAAGGTCCATTTGCGCCGGAAATTGCCGTCGCAAATGAGCGATTTTCTTGTAGTGAAAGGTGGGTGGATGCTGCAGGAAAAGTTCTGAATTGCTCTGCAGTGATTTGACACGTACCAGGAGCTGCTTTTTCGTTTTCTCTCTCATCAGATGCAGAATGCAACACTATAGCGTCTGACGCTGCAGCACTAAACAAACACATTAAAACACAAGATGGGGCACCAAAGTGCTAAATGATCACTTAATCAGTTTCTAACCCTCTTTTACATTAAACAACATATCTTTATTTAATTAAACAATAATATTACTTAAGAAGTCACGTTGATTTAAGCCTAAATAACATAAATAACTCTTATAAATAAGAGTTATCAGTCATCTATATTTTTGATTGGTTAATGGTGTACATTTTTTACCGTGATGATGTATACAAATTATACTCATTAACTATAAGTAAAATAAACTACTTACATATCGGTACACACCATTCACGTCGGTTCTAATTATAAGAAAAATTTTGTATAGTTTTTTTTGTCACATTTATTGGAAAAATTACAATTTTTAAAGTATATTTATTGTTTAAATTACCTTTTTACACTCATAATGCAGACAAAATAGGGAGTCGCCAATTCCACATTAGGATTTTTTGTAATGAAAAACTGACGAAGATATGAATCAAAACAAAAAAGCATATTGCGCATATGAATAAAAAAATACAGGAGTAAAAAATAAAACACCTTACATTTTAAAAGACAAAAACATACTCTTTTTTTTACAATAAGACAAAAACATACTTATAAATAGTTTTTAATTATTTTTTTATCTACTAGTGGTGAACACAACACGTAAACCTACACACATAGTAGAGATTCTGAATTCGAACTTCGGTAATTACGAAAAATATCTAGTCGAAAGAACGTCAATTTTCCCTGTTTTAATTTGCTAGGCTTTACGGACATAAGTTTCAATTATTTGATATAAAGCCATTATTGTTTTTTTCTAAACCAATGTATCATCTACAGCAATAATTAAGAGACCTATGTATCTACCACTTTTGCCACATTATATTGGTAGCCATTATTGTATTTTCATGTCATTATGGGCAACTTCAAATCTTATTTTTCTTTTGGGTAAACCAAGGTATCCTATGCGAGCACAACTGCAGAGACTAATCCCACTAGGTATTTTTCCATACGCACCCGCCTGCAGGGATCGAAACATTGACCAAAAATGGTTAATGAGCCCAAGTATCTACCACTTGTGCTATTCCATGTTGGCAACTTCAAATCTTATTTAGCCGTGGCCAAATCCGGATCAAATATTTTCCATTGAAATCGGCATAATTCTAGGCCTACATTCACCAATTTGCAAGACTGGATAAATATTTGTTAGGTGAGAAGCCGTTCACCATGGTTCATTGCTCCTTAATTCCCTCAACATGAACTCTCACGTAGATTAATTTCATGTGTTTTTCGGGTCAACATATATGTCATGCATTTAATGTGTCTATTTTCCGCTTATCTTGTTGTAAAGTCAGAATCAAACATATCATATGGTCCATTAGCATGTTAAGTTAAAGTTAAAGCTAGCTTTTTAAAAATGCTTTAGTACTCTTCCTCTGTCATTTGTATCACGTTCACGTACCAAGTACCAACGTGTGTCATGCTCATGCCGCCAAATTTATTCGAACGTTGTATGAGACATTCTTTTGTGGATAAAGACAATTTTTAGAGTAGACTTTTTATTAAAAGTCAAACTTTAACAAATGTTGTGCCTAGCCTAGCTAGCCACCCATTTCCAAGTCAGCGCCATGTCCCCATCACAAAGTTAATATTCCATGCATTACACACGTGTTGTTGCTCCGACTTCAATTGTTTCCCGCTCCAAATCTCTTCACGAATCAAATTTCCATTCCACTATCAATACAACTGATCTCAACCTTGAAAAATAGAACATGAACTCTCTAATTCCATATAAATACCATTCCAAACATTCAACACAATCGTCCTTCTCAACACATTCAAATGTTCTACTAGCTAACTCTTTCTCTTATATTTTTCAACTATTCATTAACA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00847.23	AP2	49	99	6.60E-13

Gene family

Gene family	Subfamily
Transcription Factors Family	AP2

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0010371	regulation of gibberellin biosynthetic process	Biological Process
GO:0048506	regulation of timing of meristematic phase transition	Biological Process

InterPro

InterPro term	Description
IPR016177	DNA-binding domain superfamily
IPR045277	Dehydration-responsive element-binding protein 1A-I
IPR036955	AP2/ERF domain superfamily
IPR001471	AP2/ERF domain

trEMBL

trEMBL term	Description
A0A151QPD3	_

SwissProt

SwissProt term	Description
DRE1D_ARATH	Dehydration-responsive element-binding protein 1D

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G51990	C-repeat-binding factor 4
Medicago sativa L.	MsG0280010490.01.T01	_
Oryza sativa L.	LOC_Os01g73770.1	dehydration-responsive element-binding protein, putative, expressed
Cucumis sativus L.	Csa012414	_
Glycyrrhiza uralensis Fisch.	Glyur000193s00013968.1	_
Codonopsis lanceolata	Cl_chr03_42770T	_
Arachis hypogaea L.	AH08G15240.1	Dehydration-responsive element-binding protein 1D like

Expression pattern