Gene detail

Detail information of Am01G039470.1 Annotation

Gene ID	Annotation
Am01G039470.1	Homeodomain-like superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G039470.1	mRNA	Chr01	209655592	209657633	-

Sequences

CDS:

>Am01G039470.1
ATGTATCATCATCATAATCATAATCATAACCATCATCACCAACACCAAGGAAAAAATATTCATTCTTCTTCAAGAATGCCAATTTCTTCTGAGAGGCATATGTTTCTTCAAACAGGAAATGGTTCTGGTGATTCTGGACTTGTGCTATCAACTGATGCTAAGCCTAGATTAAAATGGACACCTGATCTTCATGCCAGGTTTATTGAAGCAGTCAATCAGTTAGGTGGAGCTGACAAGGCAACTCCAAAAACTGTGATGAAACTTATGGGGATTCCAGGACTTACCTTGTATCATCTAAAGAGCCATCTTCAGAAGTATAGATTAAGCAAGAATCTGCATGGACAAAGCAACAACGTGACACAAAAAATAAATACACATGCAGCCACAGGAAGTGGAGAGAGATCACTTTCGGAAAACAATGGAACTCACATGAATAAATTAAGCCTTGCACCTCAGCCTAACAAAGATATACACATAAGTGAGGCACTTCAGATGCAGATTGAGGTTCAGAGAAGACTCAATGAACAACTTGAGTGTGAACCTGTGCAGGTACAAAGACACTTACAACTTCGAATAGAGGCACAAGGAAAATACCTTCAATCAGTACTAGAGACAGCACAAGAAACACTTGGAAGACAGAATTTAGGAATAGTAGGACTTGAAGATACCAAAGTTCAACTTTCAGAACTTGTATCAAAAGTATCATCTCAGTGTCTAAATTCAGCATTTCAAGAAGTGAAAGAGTTACAAGCTGGAAATGGAATTTGCACTAACCAACCAAATGACTGTTCAATGGACAACAGTAGTTGCCTAACATCATGTGACAGATCACAAAAGGATCATCAACAAGACATTCAAAATGGTTTAAGACACTTCAATGGTCATATGTTCATGGAAAGAAAGGAACAAGTCACAGAAACTACTATTCCATTGGGAAAGAACAACTTTCTCACCTCTTTGGGAAAGAATAATAATGAAGAAAGAAGTAACTATGGTAACTTATCTATGAGTATTGGACTTGAAAGAGAAACACAACAAACAGTGGATGATCATCATGATAGGTTGCCTTCTAATTACTTTGCAGCATCGAGGTTGGATTTAAACACTCGTGGAGATAATAATGAAGCTGCAACAAGTTGTAAACAACTGGACTTAAATAGATTCAGTTGGAACTAA

Protein:

Promoter(3k):

>AM01G039470.1
TACTAATAAGTAGAATGAAGAATAAAAATTTATGTCCCTTATCAAACAAAGGTGGGACATCCATCCACTATATTGGAAGGTAAAGCCAATAGGATACTCCTAGAAAAAGAGATAAGCAACCCTCTCTTTTGTACAAACACATACTCTTTTAAAGATGCCAAAGACTTGAAAGTTCAAAGTAGTAAGGACAGTTTGGCAGCATCAAGTAAAGATGATTACTACCAATATGGAAAAAACAGGTTCTTTAGAAGCATGAACAGGAACATGATATTAAAGCTTCACAAAAAGAATTATTCTATTTTTGGCTTTGGTTTTCAAGACTTTACACCTTTCTGTGCATGTTATTGCCTATAATAAAAATCAGATGGTAGTTGTAAAAATAAATTTTTCTATGTATGGTTAATTTTAATTATATATAATTAAAACACTTAGTAGTTATCATTGACCCCACCAAAAAGAACCTCTAATTGCATGGTCAAAACAATGATGTCAACTTAAACATGCAATGTTAAAACTAGGACTTTACTAATAGGTAGTGAGAATTAATACAGAAAGGTAAACACTAAACACAAAGGTAAGTATTCTTTATTCTCTTCCAATAATAACCTAGTCAGTAGTTTATGAGTTTTTAATCCTTTTATATTGTTTTCGAGTAAATAGTCATTTTGGTCTCTGAATGTATGTATATATCATTATAGTCTCTGAATGTATCGAAATTGCAAACACGTCATTAATTATCTCTTTTGTTAGTAATTTTAGGGACTAAATTGACTAATAAAAACACATTTGAGGATCACAATGATTAACAAAAGACCCATTTGAAGACCAAAATAACTCACTAAAGAGACACTTGAGGATGTGTTTGCAATTTCAATATATTCAGAGACACAACGCCTCAGAAAAAATATTAAAGACCACCTGAATTTTAGTGAAGGAATACATATTCTAAGTGTGGTTTTATTTATTTATTTATTTATTTATGTGTAATGATATTTTGAGATATGGAAGGAGTTCTAATAGTGCCAAAGATAAAAACAACAAATTAATGCTCTTGCCAGGTGGTTGTACCAAGTCCATTTAAGGAGCAAATTCGATATCAAAACACAAATCAATACTCTTGCCCATATTATTCCAATCCACATGCAAGAAAACTACTTAGGAACTCACCTTTAACTTTTCCTAAAGTCTCTCATGATTCTCCTATGGCCACATTAAATATTCTCAAAAATCAGAATCAAGAACAAGAACAATAACAAGTGATATCAAGATACTGTTCAAGGAATCTTTAGTCTTAATTAATCATTTCTATAGTTTCTATAAGTCTATAAGTTGTATATAAAATATTTATCTTATCATGTTGTTCTCTCTTACACCTGATGAATGGTTTTCAGCAAATCAGATACGGTTTTATTAGTAGCCATCTACTTCTAGATCTAGTTTAGTTTTTGTGACTTATTTATACTCTATTATATTATGAATTAGCTGTTAATCATTTAAACATTATATTCGAGGAATTTTAATCTCATAATAGTACAGTGTAACATCTTTCAAATTGAATAATGCTTGATTTGCATGCAGTGGACACATGCATTGCCTAAGGAATGCATGGTTTTAATTAAAACTGAATCAGATTCTAATACATTTTTTTTAGTTGTTTTCATAGTGGTTTATCAATGGTATATGCCATTTAGTGGAAGTTCTATCCATGGATAAGAACTAATGTAAAGAAAATAAAAATTATAAGGAATGACAACAAAAATGTAATGATTCTTAAATTGAGAATCAACTACATTAACCATGGTACAAGTCAAGGGCAAAGGAAGTGGTCCTATGCATGCTGCATGTAATTAACCAAATGAAAGTATAAAAGCAAGTACAATTCTAGCTTTCTACTTTTTATTAAGTCCTTGTTTGCTTAGGATTCCAAAGGATGGGGACTGTGTTATTATGCCAAAGAAAGAATGAAAAGGTCAGTGTCCATCTTTCTTATATTTTATATGGTGCAAGCTGAATAAGTACCAAACTTATTGAAGGAGACAAAAGAGAAAGTATTCTTATTCTATTCTTTGCCTCCAAACACTCCAATAGGAAGCATCTTGTCACAATTTCTTTTTTTATTAACCTCCTCTTGCATATATGGTGCTTTAGTCAATGGAATCCTTTTATATCTATGTTCTCCATATTTATACAACCAATTAATATGTTCCTTCATGTCTTTGTCTGCACACTTTACTATAGATAACATCCTTCATGCTAGTAAATAACAATATATGAAGCACTGACACAGACATGGACACCATACACAACAATGACACGGACACCAGTTTAATTTGAAAAATGCAAGTAATTGAATTGTCTGTCTTACACGTCTTCAACTTGAGGTGTCAGTGCTTCAGAGAATGTAGATGTAGGATTTGTAATATGACACCAAGATCAAGGTGTGGAACAAAATAATTAGGCTTATAACTTCTTAGAATCATCTTCTAGAAAAATAAAAAAAAGGATGGGCTTTGGTTGTTCCAAGTAGAGAGGGATATCAGATTCTTCAGAAACCAAGTCACAAAAGAAGAAAAAAATTATATATATGTACTCTTTCAAATTGAAGCATATGATTCCCACTTTTACCTCGCAAAAGAATAAGAATGCATATTGGGTTAATATTTGAAGGATCAATTCTAGAACCTAATGCACATAACTTTTTTTCTTTAATATTTATTTATGTGCAATTCCTTCATAAAGGAACTCAAATGGACAGCAATATCTGAGAATGGAAAGTAGAAATAGAAAAGATGGCCCACAAGTGAACAGAAGTGGGAAGGAATAATATCTATTCACAAGGATTAAGCTTAGTTTTCTATTGGTTCTATATGTATGTAAGATTCTCCAACTCTCAGATATAAATACAAGTCTCAGCATGCTTTGTGCTGAAGAGAAAGTGTGTAGAGAAGAAGCAAAACAAACACAACAAGCATTCAGAAGTTGTCTTATTTTATAGGTGGG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF14379.9	Myb_CC_LHEQLE	157	209	7.50E-21
PF00249.34	Myb_DNA-binding	56	107	1.50E-08

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0008398	sterol 14-demethylase activity	Molecular Function
GO:0008168	methyltransferase activity	Molecular Function
GO:0032259	methylation	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR044848	PHR1-like
IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain
IPR006447	Myb domain, plants
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0AA86SM19	_

SwissProt

SwissProt term	Description
PHL9_ARATH	Myb-related protein 2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G04030	Homeodomain-like superfamily protein
Medicago sativa L.	MsG0280010517.01.T01	_
Oryza sativa L.	LOC_Os03g20900.1	Myb transcription factor, putative, expressed
Cucumis sativus L.	Csa009279	_
Glycyrrhiza uralensis Fisch.	Glyur000694s00023248.1	_
Codonopsis lanceolata	Cl_chr04_50490T	_
Arachis hypogaea L.	AH18G05880.1	Uncharacterized protein like

Expression pattern