Gene detail

Detail information of Am01G038560.1 Annotation

Gene ID	Annotation
Am01G038560.1	glutamate receptor 3.4

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G038560.1	mRNA	Chr01	206861739	206867171	-

Sequences

CDS:

>Am01G038560.1
ATGGAGGTGCTTGGGGTCAAGGGGTTGTTCTTCTTGGTTTTCTGCTTATGGATTCCCAAAGAAGTGGTGGGAAGGAACGGAACTACCATTGGAAATTCTACTGTTTCTACCAGACCAAGTGTTTTGAAAATTGGAGCCCTTTTTACTGTTAATTCTGTGATTGGAAGATCAGCTAAACCAGCAATCTTGGCTGCAATTGAAGATGTTAATGCTAATAAGACCATTCTCCCAGGCATTACACTTGATGTTATTTTACATGATACAAATTGCAGTGGCTTTGTTGGAACAGTTGAAGCTTTGCAGTTAATGGAGAATGAAGTGGTTGCAGTCATTGGTCCACAATCATCAGGAATAGCACATATAATCTCACATGTGGTTAATGAACTTCATGTACCACTTCTTTCATTTGGGGCAACAGACCCTACTCTATCTTCTCTCCAGTACCCTTATTTCCTCCGCACAACCCACAATGACTATTTTCAGATGTATGCAATTGCAGACCTTGTTGATTACTACAGATGGAGAGAAGTTATTGCCATTTTTGTAGATGATGATAATGGAAGAAATGGTGTTTCAGTTTTAGGTGACGCTCTCGCGAAAAAACGCGGCAAAATCTCTTACAAGGCTGCATTTCCTGCTGGAGCTTCTAAGAATGATATCAGTGACTTGTTGAATGGAGTTAACTTAATGGAATCAAGAGTTTATGTTCTTCATGTTAATCCTGATTCTGGTTTGAAAATTTTCTCTATTGCTAAGAAGCTTGGTATGATGACTAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTTTTGGATTCAATGGAGCAAGTTGATACTAACACATTAAATCTCCTTCAAGGAGTTGTAGCTTTTCGCCATCATACTCCTGAGACTAATCTCAAGAAGAGTTTTTTCTCTAGGTTGAAGAACCAAAAAGGCATGGAGAGTAAAAATTTTCATTCTTATGCATTATATGCATATGATTCTGTTTGGTTAGCAGCTTATGCTCTTGATACTTTTCTTAAAGAAGGTGGAAACATATCTTTCTCTTCTGATCCTAAATTACGCGACACGAATGGAAGCATGTTGCATTTGTCATCTCTTCGTGTTTTTGAAAGTGGTCCATTGTTTCTCCCTACGATTTTGAGAATGAACTTTACTGGTTTGAGTGGTCAGATTCAGTTTGATGCAGAGAAGAATCTTATTCATCCAGCATATGATATCCTTAACATTGGCGAATCGGGATTGCGAAGAATCGGTTACTGGTCTAATTATACTGGTTTATCAATTTTGTCTCCAGAAATTTTGTATAAGAAACCACCTAACACTTCAACAAGCAATCAAAAACTTTTCAGTGTTGTGTGGCCTGGAGAAACTCTAGTAACTCCAAAAGGGTGGGTGTTCCCGAACAATGGAAAGGCGTTACGAATAGCGGTTCCTCATCGAATAAGCTACTTAGAGTTTGTATCTAAAGACAAGAATCCTCCTGGAGTTAAAGGCTATTGCATTGATGTCTTTGAAGCAGCCATAAACTTATTGCCTTATCCCGTTCCAAGACAATATATATTATATGGAGATGGTAAAGGAAATCCTAACTACAATGAGCTTGTCAATCAGGTTGCACTAAATAACTTTGATGCAGCTGTTGGAGATGTTACAATTGTGCCAAACAGAACAAGGATTTTGGATTTCACTCAACCTTTCATGGAATCAGGACTTGTAGTTGTTGTTCCTGTCAAGGAGACAAAATCAAGCCCTTGGGCTTTCCTCAAGCCATTCACTGCTCAAATGTGGTGTGTTACTGGTGCTTTTTTTCTTTTTGTGGGAGCTGTTGTGTGGATTCTTGAGCATAGGCATAATCCAGAATTCCGCGGTCCACCTAAGAAACAAATAATGACAATCTTTTGGTTTACTTTCTCAACAATGTTTTTCTCACATAGAGAGAATACTGTGAGTGGTCTTGGGAGATTTGTTCTAATCATATGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACAGCAAGCTTAACATCAATTCTCACAGTGCAGCAACTTTCCTCACAAATTGAAGGAATTGACAGCTTGATATCAGGTACTCAACTGATTGGAATTCAAGAAGGGTCATTTGCGCGGAGATATCTGATAGATGGACTCAACATACATGAATCTAGACTAGTAACATTGAAAGATCAAAAGGCGTATGTTGACGCCCTTACTCGTGGACCAAAAGGAGGAGGTGTTGTGGCCATTGTTGATGAGCTTCCATATATTGAGCTCTTTATGTCTAATACCAACTGTAAGTTCAGAACTGTTGGCCAGGAGTTCACTAAAAGTGGCATGGGATTTGCATTTCAGAGGGACTCTCCCCTTGCAGTTGATATGTCAACTGCAATTCTTCAACTTTCTGAGAATGGTGACCTGCAAAAGATCCATGATAAATGGCTTTTGAGACGTGATTGCGCTGCAAAAGTCGACGACGTCGATTCGAATGAACTATCACTAAGTAGCTTCTGGGGTCTTTTTCTTATATGTGGCATTGCATGTTTACTTGCTATGATTGCATTCTTTGTTAGAGTGTTTTGTCAATACATGAAATTCATCCCAGAGGATGAGGAAGTTGATCAGGAAAATCCATCAATCAGGCCTAGTAGAACAATCCGAACTACAAGCTTCAAGAACTTGATTGATTTTGTTGATAAGAGAGAAAGAGAAATCAAAGAGATACTTAGAGAAAAGAGTAAGAAAAGGAGACGCAGTCAAAGCTTAGATGAAAATTCTAGTTCACCCACCTAA

Protein:

Promoter(3k):

>AM01G038560.1
ATTTACAACTTTTAACAATGTATAAGTCGTACAATCGAAAATACAAATGTTTGACAATAGAAAATAACATAAACATATAGAATTGAAACTTCAGCATCTCCTTTAGGTTGCACCGTAGCCATGCCTCATCACCTTTAACCTTTCCTGTTTCTCTGAAAAACCACAAAACATGAAGGGTGAGATAACATTATCTCAGTGAGTCCTATCGAGACCCCTTACTAACTCTCTCGGTTCATTTATGAAACCTTTTTATTCGTAGTTCAATATATATAACTACGTGCATAAAACTTATCTTTACCTAATACATCACCTATATCATATTACCCGCATTGGGCTGTCACTTATACTATATATACTATACCCGCATTGGGCCGTCACATATACTAATCCCACATTGGACCGTCACGTATACTATGTACACTATACCCGCATTGGGCTGTCACGTATACTTGTCATGAACATAACCTCAACCTCATTATTATAACCTCAACCTCAATTAGACATTAATTCATTAAACAACTTTCATGACCTCACTCGTGGTTACTAACGTTCATTAACATGACTTAGGGAACATCACAATCCAGTCCAAACATCATTATTTCAATCACAATCAATATTACCCGCATTGGGCCGCCACCTATACTATCCGCATTGGGCCGTCACGCATACTTGACATAACATAACCTCAACTTCTAATCATTAACATTCAACAACATGACTTGAAATCGTTCACCTCATATCATTCATCAATACATAGGGTTGGGAGAAGGGATTAGAATGAACTTGGAACCGTTCGGAATAGCCTAGGACGTGTTTTGAAATGGGGTAACAGAGGTGGACGCACGGTCCGTGCGCTATGGCGCACGACCCGTGCGCATTTTAAAAAGTTTGCGCATGAGTAGCAGAACCACACGCACGATCCGTGCCACAGGGGCAGACAGTCCGTGCGTGACCATCAGTTTCCAGAAATTGCATTTTCGTGTAATGTTGGCTATCCCGTTCGTTCCAACTTTCATTCCATTCGATCCCCAAACATAACAATACATCATTCAGCAACAACAATCATCATAAACATCATCAAACCTTCCATTCTCAATCATTCAAGTAATCATAACAAAATACATTTTCGTAAATTACGGTTTCCGACTCAAAACTTAATAAAACGAAAACCAAAACATATATTCAGTCACAACCAGTATCTAACACGAAATTTAATCCCTAAGCGAGTATAGAACTCACCGTAGTGTGATGAAAATCACAACAACAACAATCAACGGAGCTCCCGCGCCACAAAACCACACAAACGGTCCCCGAACACGAACTCCTTGCTTCAACAAACTTGAAATCGTTCTAAGGCTACCCAAGAAGCTCCGATCACTACCCAATACACTGAAACTTGGATTTGGCTTGAACAGATGCTCTAACACAATTTGTTAAGTTTCTATGATGACATGCAAGTGCTCATAACTTCACATTTCTCACTTTTGAGCTTGAGACTCACAAATGGTGAATTGTGCTAGAGGAAGAACCAGCTACTGATTTTGGTATCTATGGGTAGAGGGTGAAAAATGGGGAAGAAGGATGTAAGAATTTCTCACATGCATCAATGGTTGGAAATCACCTCTCCTCTCCTTCTTCTTCTCTCACTCTCGTGAGTCTCTCCTTCTCTCACACTCTCTTTTGTTATTTCAGAATTTGGGGTGTGTGTGTGTGTTCTATCATGTGGAAGTGAGTGAGGGGATTAAATGATTGGTTTCGGTGGATTGATTTTCAGAAATATTTTTCTCAAAAACAACATTATCAAAATAAAAAATCTATTGTCCTTATAATTAGGTTTACGTGTGCGCATTAGCCTCTAATGAAGTAGAAAGATGTGTCATAATGATGCAATCCCTCAAATGTCACATCTAGGACCTACCTTGTTTTTTTGACCATATCTACGACCTACCTGTCTGGTGCAGTTTTAGAAATTTTTATTTTCATTAATCATGAACCATTCATTGGTTTATAGAAGCTGAAATTGGTTGTACACTTATAAGAGAATACGAGATTCTGTATGGTGTAGCCCAATAAAAATAAATATACTCACTCAAAAATGCTTAAAATATTTGTTACGACAAATTATTGGATACGTAAGACTTAAGGGTGTGACACATTAATTTTTTCCACTCCTCATATTCTGTCATTGGTCACTTTCTACATTGGCCACAAGTTGCCAGAGAATACATAACCACCTTAGACATGTGAAACTAAAATCATTCATGTATCAACAAAAGACACTGAGCATATCTCTGTCTGGCTATGCCTTCACCATCACATATAAAAAATATCGATATTTTTTCCTATTTTGATCAATAATTAAACAAAAGAAATTCCATAAAAAAAAAATAAACAAAACAAGTGTGACACTCATGTAATAGACTAACAGGCATCTCTAGCGAGAATAACGTGTGAAGACATTTCTTCTTGATTCGTAAAAGGGAGTGAATAGAATTCTTTACTTTGCCTCGTCACAGTATTTTGATTCAGACTTGAATCACATGTTTTATATAATATATGCATAATTAATGTTCAGAAACCATTGCAACTTGCAAGCTTTTATCCCTTTTTAAGTTTGGCTTTGAGGTAATCTCCTCATACTCTCTCCACTCTTTACTCCTTGATAGGCATGTGGATGGTGGGTCTCCACTTTGGCAACAATACCATTTAATTTTATATGGTCTTCAATACTTGTTTACCTATTATGATGATAAAAATCATTTGAGTATAAGCACATATTTAATAGTGATATAAAAAGTCTAGATTTTTTTTCTTTCTGGGCAAGTGGGTATCTATATTTTCAAATCCAATTAACTGATTCTATGTCTTGATATGTGTGTTTGAAAGTTTAATCTAGTTTTTCTTGTTTTGGTTCCCTTGTTTGTGTCTTTATGCTGTTTCTGAAGTGGTTGGTGGCACATGATGACAGGTGCAAGGGATTTTCTAGAAACATTTTCAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01094.31	ANF_receptor	59	413	6.70E-83
PF00060.29	Lig_chan	597	851	4.90E-37
PF13458.9	Peripla_BP_6	43	413	1.50E-18
PF00497.23	SBP_bac_3	532	818	7.10E-18
PF10613.12	Lig_chan-Glu_bd	494	580	3.00E-09

Gene family

Gene family	Subfamily
Transporter family	GIC

Gene Ontology

GO term	Description	Category
GO:0005886	plasma membrane	Cellular Component
GO:0007186	G protein-coupled receptor signaling pathway	Biological Process
GO:0038023	signaling receptor activity	Molecular Function
GO:0003924	GTPase activity	Molecular Function
GO:0005525	GTP binding	Molecular Function

InterPro

InterPro term	Description
IPR001638	Solute-binding protein family 3/N-terminal domain of MltF
IPR001828	Receptor, ligand binding region
IPR044440	Plant glutamate receptor, periplasmic ligand-binding domain
IPR028082	Periplasmic binding protein-like I
IPR017103	Ionotropic glutamate receptor, plant
IPR001320	Ionotropic glutamate receptor, C-terminal
IPR015683	Ionotropic glutamate receptor

trEMBL

trEMBL term	Description
A0A1S2XCX6	_

SwissProt

SwissProt term	Description
GLR34_ARATH	Glutamate receptor 3.4

KEGG

KO	Description	Enzyme
K05387	glutamate receptor, ionotropic, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G05200	glutamate receptor 3.4
Medicago sativa L.	MsG0580025215.01.T01	_
Oryza sativa L.	LOC_Os07g01310.1	glutamate receptor, putative, expressed
Cucumis sativus L.	Csa001181	_
Glycyrrhiza uralensis Fisch.	Glyur000878s00027523.1	_
Codonopsis lanceolata	Cl_chr04_20130T	_
Arachis hypogaea L.	AH18G07030.1	Glutamate receptor 3.4 like

Expression pattern