Gene detail

Detail information of Am01G038090.1 Annotation

Gene ID	Annotation
Am01G038090.1	MYB-like 102

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G038090.1	mRNA	Chr01	205690355	205691924	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G038090.1
TTTAATAGCGCTTCAAAACTTTTAATAGCGCTTTTTTGACCTTTTATAAGCGCTATTAAAAGTTTTGAAGAGCTATTAAAAGTCATGAGGGACTAAAATTGAAAGCGAAAGAATAAGATGAGGACCAAAACGCCTATTTCGTTAATGTAGGGACTAAACTTAGAAGGAGCCGATTTTGTAGGGACTAAAAACATATTTTACCCTTGATAAAAAAATAAAAATTAGAAATGAAAATTAATGATTAATTTAAATAAATATCCATACAACAAAAAAATAGCCATACATTAAAAAAAATATCCATACAACAAAATAAAATAATCCAAAGCTACTGGGGTGGCTGCTGGTCTAACTCATCACCATGATAATAGGTATCAGATGTAAGAAAAGCAGTAAGCGAATCCATAATATTAAGATCGATGTTGGGCCGCTGGGGCTGATGGTATGGCTGCTGGGGTGACTGCTGCTGGGGCTGTGTATATGGCTGCTGGTATGGCTGCTGGGGTGACTGCTGCTGGGGCTGCTGGAATGCCTGCGTGTATGGCGGCTAGTATGGCTGCTGGGGTTGAGGTGCATACTGCTGGGAATACTGGGGTGCATACTGCGGCTGAGGCCACTGCTGAAATGCATCACCGTAATGCTGCTGTGACTGATACTGCCAAGGACCTGTAGTTAAGTTGGAGGATGATACGGAACGTTTGATGTGTGTAAATGTCTACACTTATCAAACGCTCGGCATCATCCCCTAACTTAATAGGAGGGATATTCGTAGGGGAGGTTCATGACAATGTTACTTTTAACGAAAAAGATGAAGGAGATGTTAATGACAAGGTGGAAGTTTCTTTACAAAGAAATGGAGACATACGCCACTCTCTTGGAGCCGCTGCCGACAATGCTCAAGAGAGTGGCGTATGTCTCTGTTTCTTTGAAGAGAATGAGAGTATCGGTAGAGGTGTGAAGAAGAAGAAGCGGAGAAGAGATTTATATAAAGGAAACGAAAATCAACGGTCAAAAGGCGAATCCGCCGCTCCGGCGGATTTAGGGTGTTTCCGGCGGATATTTGAAATTCAAAATTCGCGCTTTCAGGATTTTCCGGTGGATTTTTTATCCGCCGCAAACTTACCGGCGGACTTTAGGGATTTTCCGGCGTATTTATCCACCGCAAGTGTTTCCGGCGGATTGAGAGGCATTTCCGGCGGATTTTGATTTTTTTTCAAAAAAAAAAAAATTCGTAAACCAGATCTGCCGAAAATACCTCGAAAATCCGCCGGAAATGTTTGCGGCGGATAAATCCGCGGGAAAGTTCCTATTTCCGCTGGTAAGTTTGCGGCGGATACAATCTGCCGGTAAGCCCAATAATCCTCCGAAAAGTTTCCGGCGGATAAAAATCCGCCGGAAAGTCCTGGCCGGTAAAACTGATTATTCTTGTAGTGAGAATATGCAGCAAGATGAGGAGTCTGGGGAGGCTGCGGAGTCCGATGGCGGCAACTTTTAGGATTTGTTGTATTAGTTTAACATTTCAGATTAAGTGCTGTTGATTCGAATTTTATGTTATTGAAGAATTTTATTCCCGGAATTTTTATTTTAAACTGTTTTATGTATTTTAGATTTTATTATTTATTAATAAAATAAACAGGTATAAAAGAAGGTTTATCAAAAAAAAATTCAATCAGTTGGTCATTAGCGAGGGAAATTGGACGCGTGGCTGTCAGAATTTAACCACGTGTCTGTCTTTATTAGCCAGAGAATTTTAATCCCTCACTAATTAGCGAGGGATATTTCTTTCGCTATTTAGCGAGAGATTCAAATTCCATCGCTAATCCCATTAGCATTGAGCAATTTAGCGACGAAACATGTCCCTCGCTAATTCCCTCGCTAATGGGAATTAGCGACGGATTTGGGACATGTAGCAAGGGAATAATCCGTCGCTAATTAGCAAGTTTTTTGTAGTGTTTTGTGATATCATCGTATTAGTGCAGCGCTGTTTTGTTCGTCTTGGTGCGGGTGCGGTGCTGTTTAGTTTTCCAGTCTTGTTGCGGCGTTCGTTTGATTCAGATTGACAAATCTTTGATCCATTAAATACGAATTCAATCAATGACTTGGGTGTCAACGTTACACACCCAGCGGCATGGGTATTCAGGGCATTTTGATTTTGTCACATTTATAGGCAATTTGCCGTTTTATGCTATTAATCTGAGTGCTATGAGTTTTTCGCAGATTCATTCTTTTTTGTTTTAGCGATATCAGATATGTTGTTTTCGATGCATTTTATTAATTTGAATGAATGGATATATTTTTTAGTCAAAAAAAAGTTTGTCATAAAAGGAGTGACAATGGACAAATTGAAATAATTATAATTGATATATGCTCCCCAAAATTTAAATCACTTCTATAACCCCAATTTTCCTTATTTTTAAAAGAACTTCTACAACTCCAACAAACTAATCATTGTTTTGTAATTTATAATAAATATTTCAAGGTTTTTTTTATAGAAAAATATTTCAGGGTGGTTTTAAATATTTCAAGGCTTTTGGGATTGTAATACCGGGAATATGCTTTATTTATAGCCCCCGGACATATAGTATGAAATTAATAATATACCAGGTACTGATCAAACTTTATCAGATCGATAAAAATGCGTATTGCATGGCCCATATGCAATCTACTGTATGTAAGTATTGCATACGTAAGAAATGTATATAAAATACAAAAATGTGCATAATTGATATGAATGTACAATACAAATCACCATATATGTGTATATATTGTTGAAAACGTTTAAGATGGGCGGCACCAAATCCTTTTGACTTCAAACACATAGCTCCTCCTTTCTTCTCCTATAAAAGCAAGGGTCGTCGTGTCCTTTGTACTAGAAGAACCAACAAAAGTTTACTTTCCTCTTGTGCATTTAAGAATCAAGGACCCCTCTTTCTATTTTTTTGGTGTTGGAGTGCACTTTTTGAAACTCATCCACCTTTTTAACATTTATTATCTGTTTGTGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	4.80E-32
PF00249.34	Myb_DNA-binding	67	111	4.80E-32
PF13921.9	Myb_DNA-bind_6	17	76	1.20E-19
PF13921.9	Myb_DNA-bind_6	71	115	1.20E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A386PXR5	_

SwissProt

SwissProt term	Description
MY102_ARATH	Transcription factor MYB102

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G21440	MYB-like 102
Medicago sativa L.	MsG0280010653.01.T01	_
Oryza sativa L.	LOC_Os07g37210.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa003349	_
Glycyrrhiza uralensis Fisch.	Glyur000009s00001395.1	_
Codonopsis lanceolata	Cl_chr08_12700T	_
Arachis hypogaea L.	AH08G17290.1	Transcription factor MYB39 like

Expression pattern