Gene detail

Detail information of Am01G036960.1 Annotation

Gene ID	Annotation
Am01G036960.1	riboflavin kinase/FMN hydrolase

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G036960.1	mRNA	Chr01	201760949	201764229	+

Sequences

CDS:

>Am01G036960.1
ATGAGCTGCTGTTGTGAGTTCAAAGGTTGCAATAATGAAACTAAGATTTTGGCTGTCATTTTTGATTTGGATGGCACACTTTTGGATTCTGAAAGGGCTACAAGGGGTGTAATGAATGAGTTTTTGGCCAAGTATGGGAAAGAATTGGACAAGGAAAAGCAACAAAAGAAGAGGTTTGGGATGACACAAAAGGAGTCAGCAGCTGTAATGGTTAGTGACTATCAACTTCCATTGACACCGGATCAATTTATCAAAGAAATCACTCCTTTATATAGGCAAAGGTGGGCAGAAGCCAAAGCATTGCCTGGTGCTAATCGCCTTATTAAGCATCTAGTGAGAAATGGGGTGCCAATTTCTCTCGCTTCAAACTCCTTGCAAGAATACATTCATGCAAAAATTTCTTATCATAAAGGTTGGAAAGAAAGTTTCTCTGTAATTCTAGGAAGCGACCAGGTTGAAGCTGGGAAGCCTGCTCCATATTTATTTGAAGAAGCAGCCAAGAAAATGGGTGTAGATGCAGTTAACTGCCTTGTGATTGAGGATTCCTTGGTTGGTGTAAAGGCAGCTAATGCTGCAAAAATGAAGGTAGTAGCTATACCATCTCGAAGGGAATCTGATTGTAATGGACTAGCAAATACTGTTCTTCATTCACTTTTAGAGTTTCAGCCTGAGCTATGGGGTCTTCCACCTTTCGATGATTGGGTAGGTAACACATTGCCAGTTGAGCCAATTCATCTCAGTGGTTCATATGTTTCTGGATCTCTGCTTGAAACCACGGAAAATGCAACAATTGGTCTTCCTGATCAAGTTGTTGGGCTCTACTTTGGTTGGGCCAAGGTTGCCGCAGATAGGAACTTTAAGGCACTGGTTAGCATTTATTCGGATTTCTCCAGTGTTGCGTACAGAAAAATTCATGTTTGGCTTATTGATGAAAACAGTGACCATAAATCTAAGCAGCAGATGCAAATCCGTCTTGTTGGGTATATAAGAGGATCGGATAACAAGGAACTCAAATCAATGCAATTGGAGAAAGTTGAAGAATACAAGTCCATTACGAGAGCTTCACTAGATTTGCCATCATTTGCTAATTTTTCCTAG

Protein:

Promoter(3k):

>AM01G036960.1
TTTCTTTAGTTCTACCTATTCTATTTTATACTTTGTATTTATTCTCTTCTGGCCTTATATCTTTCTTCTGGCATTATATTTAATGATGTTCTTTTTGAAAGAGCTGTTACTCAGGAATTTCCTATTCAGAATACTCTATCCTTTTATCTTCTACCTAAAAGTTGTATGTTTTGTATATTGCAGTCTGCTACCACCGCAGCAGAGGCTGAATTACCCCCTACACATCCCATCCGATTGGGTTTGGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCACCAGAAAGGTTTGTGGGTTTGATTTATGGTCTCAATTATGATTGTTAGTTGTTGTGTTTAATGTGGGAGAATGTATTTTTCCTTTTTCCAGAGCCTGCCATCTTGCAAAGCAGGCTTTTGATGAAGCTATTTCAGAGCTTGACACCTTGAATGAGGAGTCCTACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACCTGACTCTGTGGACTTCTGACATCCCAGAAGATGGAGGTAATTATCAATAGAAGACTTACAGTGGACTTAGATTTTTTATTAACTCCTTGGTGAGGATACTAACTCCTTGGTTTGAAGCTGGAGTAATTCCAATGCACAGTAACCATAAACACAAATCATGATCCAACATTGTAAGGTTGTGGAGCCCAAAATCAATATGCACCTATATCTAAAGTCACTAATCTTGTTTAGTTGTTAATTATTATAATTATGTTATTTTGGTGGTCCTTTTAATGTTTACGCCATTTTTCTCACTTCCTGTTACAGAAGATTCTCTGAAAGCCAATGGCACTGCCAAGCTTGGTGGAGGTGAAGATGCAGAGGTGGGGAATTCTCATATTTGGTAGCTATAATTTTTTTCCTGCTTGGTAGCTTTAATTTATTCATATCATTACTCTGTTATTTTCATTGCAGTGAGGCTGATGTTTGGCGGCAACCTTCTTAGGATTGATGCATGTGTTTGGGAATGAAACATTAGGGCTGATTACTTATTTGTGTACTAGCTAGAGATAGGGTTCCATTGTTTTTCTCTTCTCTTTTTCTTTGAATGTTGATTGGCCATACTTCCCCGCAGAGGAAAAAGAAACTCCATTTGTGCTATATTTATGGTGATGTTTTTATTTGTGTGGTGTCTGGAAATGGCATGTTTCATTCCTAAGCATTTCCTCCTGTATGTGGAGGATTGATTTGATGAGGATTGCTCATGGTGTATTTCCTATTCCAATGAAATGCTGCAAATTTTAATGGAGATAGTCTGTCATAATTTATTTTGACTTCATTCAATACAAAAACTTGGCTGTAAAATGTAGAAGAAAGCAAATAAAAATCCAGGAGCTTATAAAAAAAACATCCAGGAAAACTGGGAGTGGCGTGACTGGGATAAATAATTATGGATAATATCCTCTACTATTTTGAGTCTAACATATCAACTAGTTAGAGTGTTTTGATTAGTTTATTGTGTTTGAAGTAGTTTATACTTAAAAAATTTATTGTGAAAACTTTGGAAAGTAATCTTAGATTCTTAGTAATAAAATGATAAAATGCGATTAACTTTGTAGTTAGGATTTCGTCAAAAAAAAAAGCTTTCTAGTTAGAATGAGATGATATTTTAGTATAGTTTTTCGATGTGACGATCATAATTCTTACGTTAAGTGAGCTAGAGAGATTATATTGTACTCCCATGGTTTCATTTATAAGCAAGAATACACTTTTTTTTATAGGTTTATTGAATAATTAATGTATTTGGTCTATATTATAGATTAAATATAATCGTTATTCAATGAACCTAATTTTTTTTATAAATAAGGTCGGAGGTAGTACTTGTTTACGAGCACCGAATGAACTTATGTGATGTGATGAATGAAAAATGCTCCAAACTTCAAAGTTAGGTGATTGGTTGTTTTTAATTCAATGTTGGTAAGACCTCCGCCGGGTCATGGTTTTTAGTCTCCTGAACTAGGATGAAATTGCGGTTGAATTGTTGAAATAATCGAATCGTAATTAGTGTTGGATCATAATTTAATTGGTTTAATTATTTGGTTCGTTGGGTTTTTAAAATCCTGGTTGAAGGTTTAAGCTTTGTCTACACGGGAATGAATTTGGTTTTTCATTTTAAATTTCTATTTGAATAGATCATTAAAATGCAAAGCGATAAGGAGGGGATTTAAAAGAACGAAGATCTTGCTTGTCAAAAAAAAAAGAACGAAGTATAAAAAGAACGAAGTTCTTTCTCACCGGATTTAAAATGCACGAAAGGTTTTACGAAAATTGAAGTATTTAACTAGCATTCATTTTTTATTAAGAGCAATGCTATTTCTAGCGATGAATTTTTTTACGAAAATTGAAGTTTTTAAAATGCTATTTTTTATTAAACCGATGAATTTAGAAAGTGTGAAAACTATTTATCATAGATGTCAAAAACAAAGCTATTTATTTATTATATTTTTATTGTTGGATAATCAAATATGAGAGAGAATGATATTTTATGATTACTAAAATTAAAAAAAATAGATGAATGAAGAAGGCACTATGGGAAGAAGAGTGTAGTATTTCATTCTCTTGGTTCGTGGATGGAATATCCACTGGAACATGCTGCTTGCTAGCGACACAATCAACTATCACTCCCAATTTGTGCTTCACACTCCACATTCCACATTCCATTTCCAAACCCACAGCATCTATTATCATTAGGCTTTTATTACTTATTATTATTGTTCCTTTCACGTGCAACAAGTCTTCCCAGGGGACCATTCTGAATTAGTAGAATTTAGCTGGTAATTAATTGTCCTAGTTTTATGTAACTATCCTAATCTTGTGCTTTCCGTTATACCTTCCTAGGGTTATTACTAGCATTCTCTTTATATCCGTTGGAAGCTAACTTCTATTTAATCCCATTCAAATACAATTCAAATCCTTTTACTAAGTTTTGTCAAAAACAAAAAATCACATCCACTAAACTTTGGTGCTGTCATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF13419.9	HAD_2	19	199	2.50E-27
PF00702.29	Hydrolase	18	192	3.90E-15
PF12710.10	HAD	19	154	8.00E-10
PF13242.9	Hydrolase_like	154	199	2.10E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0097367	carbohydrate derivative binding	Molecular Function
GO:0009156	ribonucleoside monophosphate biosynthetic process	Biological Process
GO:0004523	RNA-DNA hybrid ribonuclease activity	Molecular Function
GO:0009260	ribonucleotide biosynthetic process	Biological Process
GO:0003676	nucleic acid binding	Molecular Function

InterPro

InterPro term	Description
IPR015865	Riboflavin kinase domain, bacterial/eukaryotic
IPR023465	Riboflavin kinase domain superfamily
IPR023468	Riboflavin kinase
IPR023198	Phosphoglycolate phosphatase-like, domain 2
IPR041492	Haloacid dehalogenase-like hydrolase
IPR036412	HAD-like superfamily
IPR023214	HAD superfamily
IPR006439	HAD hydrolase, subfamily IA

trEMBL

trEMBL term	Description
A0A8B8K7U9	_

SwissProt

SwissProt term	Description
FHYRK_ARATH	Bifunctional riboflavin kinase/FMN phosphatase

KEGG

KO	Description	Enzyme
K20884	riboflavin kinase / FMN hydrolase	[EC: 2.7.1.26 3.1.3.102]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G21470	riboflavin kinase/FMN hydrolase
Medicago sativa L.	MsG0280010829.01.T01	_
Oryza sativa L.	LOC_Os01g55310.1	haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed
Cucumis sativus L.	Csa003331	_
Glycyrrhiza uralensis Fisch.	Glyur001201s00028276.1	_
Codonopsis lanceolata	Cl_chr03_24600T	_
Arachis hypogaea L.	AH08G18820.3	Bifunctional riboflavin kinase/FMN phosphatase like

Expression pattern