Gene detail

Detail information of Am01G036490.1 Annotation

Gene ID	Annotation
Am01G036490.1	galacturonosyltransferase 12

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G036490.1	mRNA	Chr01	199582990	199586180	-

Sequences

CDS:

>Am01G036490.1
ATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACTGTGCTACCAGGAAAAGGGTTGAAAGAGTTCATCAAAGTGAAAGTTGCATCAAGACGTCTCTCTTATAGGATGCTCTTTTATTCATTGTTGTTCTTCACTTTTCTTTTGAGGTTTGTTTTTGTTTTAACATCAGTTGATGGCATTGATGGAGAAAACAAGTGTTCCACCATAGGTTGCCTAGGAAAAAAATTAGGACCAAGAATTTTGGGAAGAAGATCTGAATCAACTGTCCCAGAAGTGATATACCAAACATTAGATGAACCACTTGAAATTGATGAACTAAAGGGAAGGTCAGATATTCCACAGACTTTAGAAGAGTTCATGGCTGAAATGAAGGAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTTAAAGAAATGGTGATTCTTATGGAACAAAGGACTAGGATGGCGAAAATCCAAGAATATCTATATCGTCATGTAGCATCAAGCAGCATACCAAAACAACTTCACTGTCTTGCTTTGAGGTTGGCACATGAGCACACCAACAACGCAGCAGCGCGGCTTCAGTTACCTTCTGCAGAACTAGTCCCTGCCCTTGTTGACAATTCCTACTTCCACTTTGTCCTGGCCTCAGATAATGTGCTGGCTGCCTCTGTCGTTGCAACGTCACTCGTTCGCAACTGTCTGCGACCCAAGAAAGTTGTTCTGCACATAATTACAGACAGAAAGACTTATTATCCCATGCAGGCTTGGTTTTCACTGCATCCTTTATCACCTGCTGTAATTGAGGTCAAAGCATTGCACCATTTTGATTGGTTTACGAAGGGAAAGGTGCCGGTTCTTGAAGCAATGGAGAAGGATCAGAAGGTGAGGTCACAGTTTAGAGGAGGTTCATCAGCTATAGTAGCAAATACCACTGAGAAGCCAAATGTTATTGCATCAAAACTACAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCATATCCGGATACATCTCCCGGAGTTGTTTCCAAGTCTTAACAAGGTGGTTTTCCTCGATGATGACATTGTGATACAAACTGATCTTACACCTCTATGGGACATTGACATGAATGGTAAAGTCAATGGAGCAGTGGAAACATGTACAGGAGAAGACAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCCCACCCTCTAATATCTGAAAATTTCAATCCCAATGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGTAATACATATCATTATTGGGTTGAGCAGAATATTAAATCAGACCTTAGTTTGTGGCAACTAGGGACCTTACCTCCTGGATTGATAGCATTTCACAGTCATGTCCACATTATAGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAGAATACAAGTATTGCTGATGTTGAGGAAGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGAAATAGGTTTTCCACAACTACGGCAGTTGTGGACAAAGTATGTTGACTTCTCAGATAAGTTCATTAAGAGCTGTCACATTAGAGCATGA

Protein:

Promoter(3k):

>AM01G036490.1
ATTCAATGCATTCTGTGACTTATTGTCATCGAATGTGACTTATTGTCGTCACTTTTATTCATTGCATTCTGTGAATTATTTTTCATCATTTTAATGTAGACTTTTATGATGACTTAGGTGCATTACCGACAGTTTCAACGGCCAAGATTGCATCGACACATTTATTTACTGTAAAATTAATTCTATAACTCATATTTAATAACTCAACACGAACGATTTTTTTTTTGTTTTTTTCAATGGTCTTGATGTTGCTGATACTTTTTTATCGCACCTAAAAACAACACCCTGTGTTTGTGTTTTCAACGACACCGTTGTAAAAAACTGTGATAAAAACTGGAGCCATTTTTGTGTGCAAGGGGGGCAAGAGAGTCGGAAGAGGATTGGGGGTGTTGGTGTGGTGAGTTACAAGACTAAGACTCACTCTTTATAGATAGTGGGGTGTTTCCAATGGAAAAAAATGGATGGCCCAGATCTTGCCGACATCTTTCAATGGCCTAGATTGCACCGTGCAGGGTGAATAGTGAATAGTGCGGCGTGAAGAGTGAATAGTGCATAGTGCAGTGTGATTATTGAATAGTGAATAGTGCAACGTGCAGTTTCAACGATCAGTAGTTTGTCATTTTATCGTGTATTTCGAGTTTTATGTACGGTGACACTTTTTAATAATAAAATATAGTAAAAAACTACAACTGGGTAACAACAGAGTCGGATCCAGCATCACTCGCAGTAAAAAGTGATTAAAACATAGTAAAAAACTAAGTTTTTACACTACAAAACAGACGGTTTTTTGGTGTTTTTTCAATGATCTTGATGTTGCCGACACTTTTGAACGCACGAGATCTTATAGACACTTTTAAATACATTAATGTGTTCACATATTATTTTTTTCACAATAATATTTATAATTAATTTAGAATTAACAATATTAATTTTCTAAATTAATTAAATTAATTAAATTAAATTTGTTTAAATTAATATAGAAGAAAAATAAAAATAAAAAAACACAGTTCAGAAGTCACCCTGGGGGGCGACTTCTGAACTGAAAAAGCAAAAAAAAAATTGCAAAATGCAGTTCAGAAGTCGTGGCCTGTGGGGGCGATTATTGCCTGAATTTTAGATATGTGCTAGTTTGGTAAATAATCTAAAAAGGGTGTTATTTTAGTAAATAATTTTTTTGGGGCTACAGTGGTTTTTTTTGCCCCAATATTGAGATATACAGCATCAGAAGCTAGAATAAGCTAAGGTGATTTTTAGTAAAAAAAAAGAAGCTAGAATAAGGTGATGTCCATTAATCGAGCCAAGCATGCCATGCAGGGCGAATTGAATCCATAAGATTTTTCAGTAGGTGAGGAAATACTAAAGTATTTATTCTTCTTTCTTATTCTCTATGACAATAACATATGAATTGCAACATATATACCACAGATTCAATTTCTCGAATTGAACAGAACAGAACTTTTGTACTCAACGCCAACTTCCCCTTTTTGACCTTAGAAAAATAGCACCAACTATTTTCCTATGTTTCACGTCTAAGTAATTGTGATATATATCTTCATAATAAAGCACTATATCTCTTCATCCGTTTACCACAAGAAATTATGTTCATATTTACTGGTGACCTATTTTTTAACTTAGTTGAGAAGGGTCAAACTACGTGAAGTTTTCTTATAGTGTAAGAAATTTTATTTACATTTTTTTATATATTTTCTATCTCCCTAATACTAAGAAAAAAGCTGAAGCAGAGTGTATGCTCCTATTTTTTTATACAAAAAATATTCATTTTCTCCAGTGTATAAGATTTTTGTTGCATATCTTTGTATTTTCTCAATTGTTATATTATGGTACCAAACCCCCTTAATTTTCTTTTTAGTTTTTATGGTTGTTAGCTAAATTTAATTTTTCTTTTCATTTTTCCAAGAATTTATATTTTATCCTTTAATTGTTTGAATTGCAACTACAAATATGATTAGTATATAATCAAAGATAAATTGTAACTTTTCATTTTATGGTAATGCTAATGTGCACTTGTTCACTCAAAAAGAGAATTCTGTGCCATGTCAACATGGCATTTAGGATGGAGAAAAGGTTTGTAATAAAATTAATAAGATTCATCTAAAAGTCTTAGATTGCACTTACTTTATTTATTGTTTGCAAAAATATTTCAAGGAATTTAGTGGTAGCTAATTTGTGAAAGAAAAATGACAGAAATTCTGACTAATCACAATAATTTTCTTCATTGTCCTTAAACATAATTGGTGACAATAAACTTGATAATGATAAGACAGAATTTCTTTCACCTAACATCATTTATTAATTGACACAAATCATCATTAACGTTGAATCTAGTCAAAGAAACTCTTCCTAATTGCTAAACATCATCCCTCTAAAATATATTTTTTACTACTAGTAAAAGAATAACAAGGGCTTGAACTACCTTACATTTACATATGTTTCTAAGAGAAAAAAGAAGTAATGCTTCCTGAATTTTCACTCCAAGTACCACATCCTCAACCCCACCTTAGAGAGAGAGAGAGTTATATTTCATATAGAAGTTATATTTTAAATGTCATAATAGTCCAAACTCCAAACTCTATGTTAAAAAGCTTCATGTGGAGGCAAAGAAAAGCATAGATACACCAAACAAACAAACAAACAGAAAGTTACATTACATATCTAATTTTCTCTTCTTCAAAACCAAGCCAATATCCTCCTTCTTAGTCCAATGTCTCTTTCTCTTTAACAACCCCTCAAGTTCAAGTTCACCTCAAAATAAAATAAAAATATTATTAAACCCTTCAAACACTATTGACATGCCTGACTCAAATGCTAAGCAAGGTTAGGTGAAAGACAGCAACCTTAAATGAAAACTACTATCAAAAACCTTCCTTTTACAGCATAACCTTTCAAAGGTTCTTGCAGGAAGAGGAAGAACTTAAGGACTGTTTTTGTTTTTGTCTTTTGGTGTTTGGTTTCTCTGTCTCATTGTTGTGTTAAAAAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01501.23	Glyco_transf_8	175	505	7.40E-85
PF18404.4	Glyco_transf_24	334	383	5.00E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT8

Gene Ontology

GO term	Description	Category
GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	Molecular Function
GO:0045489	pectin biosynthetic process	Biological Process
GO:0000139	Golgi membrane	Cellular Component
GO:0071555	cell wall organization	Biological Process

InterPro

InterPro term	Description
IPR029993	Plant galacturonosyltransferase GAUT
IPR029044	Nucleotide-diphospho-sugar transferases
IPR002495	Glycosyl transferase, family 8

trEMBL

trEMBL term	Description
A0A8B8KBH1	_

SwissProt

SwissProt term	Description
GAUTC_ARATH	Probable galacturonosyltransferase 12

KEGG

KO	Description	Enzyme
K20867	galacturonosyltransferase 12/13/14/15	[EC: 2.4.1.-]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G54690	galacturonosyltransferase 12
Medicago sativa L.	MsG0280010357.01.T01	_
Oryza sativa L.	LOC_Os12g38930.1	glycosyl transferase 8 domain containing protein, putative, expressed
Cucumis sativus L.	Csa017065	_
Glycyrrhiza uralensis Fisch.	Glyur000045s00009948.1	_
Codonopsis lanceolata	Cl_chr04_32680T	_
Arachis hypogaea L.	AH08G19740.1	Probable galacturonosyltransferase 12 like

Expression pattern