Gene detail

Detail information of Am01G035440.1 Annotation

Gene ID	Annotation
Am01G035440.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G035440.1	mRNA	Chr01	195920734	195928701	-

Sequences

CDS:

>Am01G035440.1
ATGGGTTGCCTGTGTTGCAAGCCTTTTGCAATTGAGGATAGTAAGGAAAGTCCAAGGGAGCGTTTATCAAACAAGGCTGTGAATGTGGTCGATACACGTATGTCAAGGGGAACTTCATCAAGGAGGGAAGATGCATATAGGGTGAAGGATAGATGTGATAACAATGATGGGAGAATTGCATTGATTGATAAGCAAGGGCAAGGGAATGGTTCTGTTAGATTAGTGCAACAAGGTGATAATTTTGAAAGGAAGAGAGAGAAAATGGAATATGCTGTTGCTCAACAACATCCGAGGATTGGTAGTGTTCCTAAGGCTATGGAAGGGGAACTTGTTGCTGGTGGATGGCCGTCGTGGCTGGCAGCTGTGGCTGGAGAAGCTATCAAGGGATGGCTGCCACGTCGTGCGGATTCTTTTGAGAAGTTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGAGCTCGTGATCTTGAACAAAAAAAGATTGTTGCTTTGAAAAAAGTAAGGTTTGATAATCTCGAGCCAGAGAGTGTTCGTTTCATGGCAAGGGAAATTCACATTCTGCGTAGGCTTGATCATCCAAATGTCATAAAACTGGAAGGCCTGGTTACATCAAGGATGTCTTGCAGCTTATACCTTGTTTTTGAGTACATGGAGCATGACTTGGCTGGCCTTGCATCACATCCTGGACTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAGCTTTTACGTGGACTTGATCATTGCCACAGCCGTGGTGTACTGCACCGTGACATCAAGGGTTCCAATCTTTTGATTGACAACAATGGAATCTTGAAAATTGCCGACTTTGGTTTGGCAAGCTTTTTCGATCCCAAGCAAACTCAGCCACTAACTAGCCGAGTCGTCACTCTTTGGTATAGGCCGCCAGAGCTTTTACTTGGAGCTACTTACTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTATATGCTGGCAAGCCCATAATGCCTGGTAGAACCGAGGTGGAGCAGTTACACAAAATTTTTAAACTTTGTGGTTCACCTTCCGAGGACTATTGGAGAAAATCAAAATTGCCTCATGCAACAATATTTAAGCCTCAACAACCCTATAGGCGTTGTGTTGGAGAAACATTCAAGGACTTCCCTGCACCTGCAGTAGAATTGATAGAGACCCTTTTGTCCATAGATCCCGCTGATCGTGGAACTTCAGCATCTGCTTTGAAGAGTGAGTTCTTCTCAATAAAGCCTCTACCTTGTGATCCTTCAATTTTACCAAAGTATCCTCCCAGCAAAGAATTTGATGCCAAAGTACGGGATGAAGAAGCTAGAAGACAAGGGGCAGCAGGAAGCAAGGGCCAGAGACATGATCCTGAGAGAAGAGGAGTAAGAGAATCTCGAGCTGTTCCCGCACCTGATGCCAATGCTGAACTGGTCTTGTCAATGCAGAAGAGACAAGGGCAGACCAATTCTCAAAGCAGGAGTGAGAAGTTTAACCCTCATCCTGAAGAAGCTGGTTCTGGATTTCCCATTGAACCTCCTAGACCATCACAAGCTGTAGAAGCAAGTGTGGATCCCCAACCACATCAGCATAAAAGAGCCTCCCATTCAGGACCACTAACTCATCGTGCCGCATGGGCAAAAGCTGGAAAGAACCAGGATGATGCCCCAAAGATTTCAATGGGAGGTGGCGACTTATCAACAATTTCGGGCTTAGTTGCAGCCAGGAGAAGTATGTTGTCTGACGATCGCAGAGAATGTTCTGGATCGTCACAAGTAGAGGCTCCAAAACTAATTACTAGGTTTCCAGGATCCTTCAAAGAGGCCTCTGAATCATTGGGGCAACAAAATCAAAATCAGAAGCATCATGTGCATGCTTCTCAAAAGGAAGAAGGGAAAGGCAGCAACAAAGACCCAAATCTTGTTGGTTATGGATCCAAGGGTTATAAAATTCACTATTCTGGTCCATTGCTTGTTCCATCTAGCAACATGGATCAAATGTTGAAAGATCACGACCGCCAAATTCAAGAGGCGGTTAGAAGAGCACGTCTTGACAAGGCGAAAATGAGAAGACTCCAAGCTGAGGGAAACCAGATAACGAATTCATTATTTGTTTCTGGTCGTTGA

Protein:

Promoter(3k):

>AM01G035440.1
TCATCGTGTCAAAGTAATCTAGGTGTCGATCAGGATCGCCCGTCCCGTCATGCATCTTTAGGCCCTCCGGGGGCTTCTCCAAGTGCTTGGGTACCGGGAAATAGTCGATTTCCGCTGTGAAGGGTCCCTTCCTAGTTGCTGACCTTTCCCTCGGAGGGGGTCTCCCGGCTGGGCGTCGGACGGGGGATCTGGGAGATGGAGGGCGCCGACGTTCAGGCCTCGGGGGACTTCCCCGGCTTATAGAACGTCGTCTTGGGGACGAAGACGCTAATGACGAGCTCTGGTGAGTTGAGTCCCCAGGATAGTAAGTCTCGTCATAAGTCTCGGTCGGGGGAGTTCCAGATTCTTGCCTCCTTCTTCTGCGTGGTGGTGAACGATGGTGGTGCCTCCTCCAAGCAGGGGACCGGTGACGTCTCTTACTGGAGGTCCTTCTGCTAGGGGAGTAAGTTTGAGGGGAGGAGCGATCCGGGATTCCTCTGGCCCGGACTTCGGCCATCTCGGCCTCCAGCTGGGAGTAACGCTGGCTCCTTTCGTCAGCCTCGGCCTGCCTCGTTAGCAGTTGGATGAGCTGTTGGACAGCATCGATCGGTACCGGGACAGTCGGGGCTGGAGGTTGGAACTGGTTTCTAGCAGAGCTCACAGGGACCATCGCCCTGGATGAGTTCCGGCCATGGGCCGAGCTGCGAGGAAGAGTAATCGCTACCCCCTCCGGGGTTTCCTGTTGCTGGTCGGGTCTGACCACGACGCTGGAGACGTTTCTCCGTCGTAATTCCGGAGCCATCTATGATCAAGGAGGTTGGGGGAAAGACTAGAGTATGAGGCTCTCCCACTGTGGTCGCCAATGTTCGGTACCGTATCTCCTGCTACGTATCCGACCCGGGATAGGTAGTCCGGTCCGAGATAGTTGGTACGTGTATCCTTGGTTGTCCGAGTTGGTGCTCCGGTCCGAGGTGGGGTGGTACCTGCAATGACACTCCGACGCTCAAGTCAGTGAGTGAGTCAATTACAAGTGAGAGTAAGTGAGAGATGAATACCATTAATGAGAGCATTCAATGCTTATTTATAGGTATCTGGAGTGGAGGAGGGCTGTTGGATCTAGGTCTGCAATCTCCACCCTTGGATGAACTGGACCCTTTGGTGTTGGGCCTTTTTGGTGGATTGGCCATTGAGGCCCAATCCATAACAATTTATAAACTACAACAAAACATAATCGACTAAAGGATGCTCTCAACCCACTTTTAAAAAAACCAACTTTTAAAATTTTTAAATTTAGCTGTTTAACTTTACCTTTTAACTAAAACGAAGAAATGAGTGAAATAACATAGAAAGAATTAATGAATAATAAATGGATATAGATATTATTTACAAATATACATACCAGTAAACTCTCTTTTTTTAGATAAAAGGAAATTATCTTACGTAACTACTTTTTGCGTAGTTCTTTATAGAAATATTTCACTCTCAATTTGAGTAAACTTTTAAATATTTACTAATTTATTAATTTAGACCTAAATTTAAATTTCCACAACGAAATGCTTAAAATATAAAATATAATTTAATGTTACTAAATATATTAAAATATGTACACAATAGAATAAAATAAAAAATGATTTAATTGATTTTAAATATTTTTACACCTATGAGTGACTTTTAAAATTAGTTAAGATAAAATATTTTTTTTATTATTTGTCGTTTTGTAATTAACTAACGTCATAAAAAAATTGTACAAAAACAATATATTTAAATTAAATCCATAAAAAAATGTGGAAAGCCTACGCTAGTTAAGATATACTCTCCCCTTCCCATATTATATGTTACTTTGGATAATTTCACATAAATTAAGAAAAATAATTAATTTTGTATTGGAAAGAAGAATTGTGAGTTAGTTTATCAAATTAGTTTTTATTAATGACATTGAAAAGATAAATTAGTAAAATAATGAAAAATATGACTGAAAAAAAATATTAATATTTTATTAAAATTTTAAAAAATTATGTATTATGAGACCATTTTTTTTGACTAAAAATTGATATAATACGTGAAGGAGGGATTACCGTAAAAATAGATAGATGAAATGAATCAAATGATGATGTTTTTGGCGCGTGAGAGTGTAATTGGAAGCAGAATGTGTTGATGCGCTGGGTTCACAGAAAGCTGCACTGCAGGGGACACCCCCTCTTCACAACATAAATATGCGCCGCGACAACATTAAATATTGAATATTTATATATATATATTTTCCTAACTTATTATTTTATTTTACATCATTGATATAATTGAATTCAATATATCTCCATTTTTTTTACCACGTTAGCTCCCTTTCTTCATCTTCCAAAACACACTCCCACGGTTCTCTCAATCCTGTTTGCCCTAGATCCATGGCTTCCCTGTTCAACCCCCACATCTCTTCTTGAGTTTCAACGCTACCCCTTTTCACTTTTTTCCATTGGGTGCAGGGAAAATCTCCAAAGAAACCAACTTTCACAAGGGTCTGTTCTGTGGAGGATCTGGGTATTGTAAATTTGAAGACTTTTGATTTCTCTTTCATTTCAAATTAGCAGGTTTTTCACTAGGGATATTGTTCTACTGTGCAAATAGCTCTCATTTTTAGTTGTTATTGTTTTTTTTTACTTCAAGTGGGGTAGAGTAAAGTGAGGATTTTTGAGATTTATGAAGTTTTGATTAGTTGAAATTTAAGGGTTTTACTACTAGTTTGATTGTGCATCTTATTGGAGTTTTAGGGATGGATTTTGTCTTTTGCTTCGCTGATTTTAACTAAATTTGAGATGGGGTGAATACTATACTTGGTTGCTATTATAGTTAAGATTTTGTACTTTTTGTTTGTGTAACATTAGAGAAGGGTTCTTTGCTGATTTTTGTATTTATGATTACTGAAGAAAGTGAATAAGATGATAGGATATTGGCAATGTTATTGAGGGGTGAACATTGATATTGGATTGGAATTTGGTTTTTGTGGGAAGGGGGTGTTGTTTCTGCATA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	138	422	3.10E-69
PF07714.20	PK_Tyr_Ser-Thr	140	351	6.60E-32

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.2:CMGC_CDK-CRK7-CDK9

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0004693	cyclin-dependent protein serine/threonine kinase activity	Molecular Function
GO:0030246	carbohydrate binding	Molecular Function
GO:0051726	regulation of cell cycle	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2XDM0	_

SwissProt

SwissProt term	Description
Y1960_ARATH	Probable serine/threonine-protein kinase At1g09600

KEGG

KO	Description	Enzyme
K08819	cyclin-dependent kinase 12/13	[EC: 2.7.11.22 2.7.11.23]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G53050	Protein kinase superfamily protein
Medicago sativa L.	MsG0280010199.01.T01	_
Oryza sativa L.	LOC_Os01g10430.1	protein kinase family protein, putative, expressed
Cucumis sativus L.	Csa015793	_
Glycyrrhiza uralensis Fisch.	Glyur000623s00024131.1	_
Codonopsis lanceolata	Cl_chr04_26520T	_
Arachis hypogaea L.	AH08G21650.2	Probable serine/threonine-protein kinase At1g09600 like

Expression pattern