Detail information of Am01G034630.1 Annotation
Gene IDAnnotation
Am01G034630.1 transcription regulatory protein SNF5, putative (BSH)
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G034630.1mRNAChr01193520940193524496-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF04855.15SNF520865.90E-36
PF04855.15SNF51002385.90E-36
Gene family
Gene familySubfamily
Epigenetic RegulatorsCHE1

Gene Ontology
GO termDescriptionCategory
GO:0000228nuclear chromosomeCellular Component
GO:0006338chromatin remodelingBiological Process
GO:0003712transcription coregulator activityMolecular Function
GO:0006357regulation of transcription by RNA polymerase IIBiological Process
GO:0016020membraneCellular Component

InterPro
InterPro termDescription
IPR006939SNF5/SMARCB1/INI1

trEMBL
trEMBL termDescription
A5X538 _

SwissProt
SwissProt termDescription
BSH_ARATHChromatin structure-remodeling complex protein BSH

KEGG
KODescriptionEnzyme
K11648SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT3G17590 transcription regulatory protein SNF5, putative (BSH)
Medicago sativa L.MsG0880047277.01.T01 _
Oryza sativa L.LOC_Os02g49190.1SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, putative, expressed
Cucumis sativus L.Csa017642 _
Glycyrrhiza uralensis Fisch.Glyur000012s00000547.1 _
Codonopsis lanceolataCl_chr01_11640T _
Arachis hypogaea L.AH11G26260.1Chromatin structure-remodeling complex protein BSH like

Expression pattern