| Gene ID | Annotation |
|---|---|
| Am01G034540.1 | chromatin remodeling factor18 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G034540.1 | mRNA | Chr01 | 193293961 | 193303465 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00176.26 | SNF2-rel_dom | 209 | 474 | 6.40E-31 |
| PF00271.34 | Helicase_C | 497 | 605 | 4.40E-15 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Others |
| Epigenetic Regulators | CHR18 |
| Transcription Factors Family | SNF2 |
| GO term | Description | Category |
|---|---|---|
| GO:0031297 | replication fork processing | Biological Process |
| GO:0005524 | ATP binding | Molecular Function |
| GO:0006281 | DNA repair | Biological Process |
| GO:0016787 | hydrolase activity | Molecular Function |
| GO:0004674 | protein serine/threonine kinase activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR038718 | SNF2-like, N-terminal domain superfamily |
| IPR000330 | SNF2, N-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR010003 | HARP domain |
| trEMBL term | Description |
|---|---|
| A0A1S2YPV8 | _ |
| SwissProt term | Description |
|---|---|
| SMAL1_DANRE | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 |
| KO | Description | Enzyme |
|---|---|---|
| K14440 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 | [EC: 5.6.2.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G48310 | chromatin remodeling factor18 |
| Medicago sativa L. | MsG0880047268.01.T01 | _ |
| Oryza sativa L. | ChrUn.fgenesh.mRNA.85 | expressed protein |
| Cucumis sativus L. | Csa017639 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000012s00000558.1 | _ |
| Codonopsis lanceolata | Cl_chr01_11710T | _ |
| Arachis hypogaea L. | AH01G30660.1 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 like |