Gene detail

Detail information of Am01G034310.1 Annotation

Gene ID	Annotation
Am01G034310.1	pleiotropic drug resistance 9

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G034310.1	mRNA	Chr01	192707318	192716881	+

Sequences

CDS:

>Am01G034310.1
ATGGAGTTAACTCCAAGAGGAAGAACACAAGGTCATGTGTTGACTATTGAAAGAGATGCAGATTCATATGTGGAAGAAGATAAAGAGTTACAATCTAAATGGGCTGCTATAGAAAAACTTCCAACTTTCAAAAGAATTAAAACTTCTTTTGTTGATGAAATTAGTCAAGATGGAAGTGCAAGTGGAAGTGGCACATGGCAAAGAAGTAGCAGTAAAAGAGTTGCTGATGTTACTAAACTTGGAGCTGTTGAAAAACGTTTGTTCATTGATAAGCTTATTAAGCATATTGAGAATGATAATTTACAATTGCTTCAGAAACTTAGAGAAAGGATGGACAGAGTCAATGTGAAGTCACCTACTGTGGAAGTGAGGTACAAGAACCTGAATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTTTATGGAACACTTTTTCTAGCTTATTTTCAGGTTTGATGAAGACTATATCATGCAGTTCTCAAGAAACCAAGATGAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTACTTCTTGGTCCACCTGGCTGTGGGAAGACGACCTTGCTAATGGCGCTTGCTGGAAAATTAGAGCAATCTCTCAAGGTTTCTGGAGAAATCTCTTACAATGGTCGCAAGCTTGATGAATTTGTTCCTCAAAAATCATCAGCTTACATAAGTCAGTATGACCTGCACATTCCTGAAATGACAGTGAGGGAAACAATTGATTTCTCGGCACGCTGTCAGGGTATTGGAACTAGAGCTGAAATAATGGTTGAAATCACCCAGAGAGAAATAGAACAAGGAATATTTCCTGACCCAGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATACTCGGATTGGATATCTGTGCTGACACAATGGTTGGAGATGCACTTGATAGAGGGATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTAGGTCCCACAAAAGCACTTTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAGTTAGTGCACATCACAGATGCAACAGCAGTGCTTTCACTCCTTCAACCAGCACCAGAAACGTTTGAGTTATTTGATGATCTTATATTGATGGCCGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCAATCCAATTCTTTAAGGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGACTTTCTTCAAGAGGTAACCTCTAAGAAGGATCAAAGGCAGTACTGGTACCGCACGGATATTCCTTACAGTTATGTTTCAGTGGATGAGTTCTCTCAAATCTTCAAAACGAGTTACTGGGGTCGAATGTTAGATGATGAGCTCTCAAAACCATATGATGCATCTCAATCCCATAAAAATTCTTTATCATTTAGCAAGTACTCCTTGGGAAAATGGAATTTGTTTAAAGCTTGTATGAAGAGGGAGCTTCTTCTCATGAAACGAAACTCATTTATCTATATATTCAAAACTGTGCAGCTTACACTCACTGCAATCATAACAATGACAGTCTTCTTACGTACGCAGCATTCAGTGGACTTAGTAGGAGCTAACTATTTATTAGGGTCATTGTACTATACACTCGTACGTCTCATGACTAATGGAGTTGCTGAGTTGATCATGACTATTACTAGACTCCCAGTTGTTTATAAGCAGAAAGCATTCTATCTCTATCCAGCTTGGGCTTACTGTCTTCCATCTTCCATTATAAAGATTCCATTTTCTGTTCTTGATTCTCTTGTTTGGACATCAATAACATATTATGTTATTGGCTACAGCCCAGAAATAACAAGGTTCTTCCGCCAGTTTCTTTTGCTTATCGTTCTGCATATGTCATCAACCTCCATGTGTCGTTTCCTTGCCTCAGTTTTCAAGACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTCATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTACCAAAGTGGTTGAGGTGGGGATTTTGGCTTTCTCCTATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGCACCTCGCTGGCAGAAGATCCAAGAGGGAAACATCACCACAGGAAGGGAGGTTCTCCGTAGTCGTGGTTTAGACTATGATAGCAATTTCTTCTGGATATCAGTTGGAGCATTACTAGGTTTCGCTGTTGTATTTGATATTGGATTCATCTTAGCATTAACGTACTTAAAAGAGCCTAAGCCATCTCGAGCTTTAGTCTCAAAAAAGCGGCTCTCTCAACTAACAAGAGGAGAAAGAAGCAATGAAGTGGAATTAAAAAATAAGTCAGTTGCAGTTGATATTAGCCACACACCAAGGGGAACTCAAAGCACAGGAAAAATGGTCTTGCCCTTTGAGCCACTTACAATATCATTTAAGGATGTCCAGTATTTTGTTGACACTCCTCCGGAGATGAAAAATCATGGTTCCAATGAGAAAAATCTACAATTGCTTCGTGATATCACGGGAGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTCAGTGGAGCAGGGAAGACTACTCTCATGGATGTCCTTTCCGGAAGAAAAACTGGAGGTATCATTGAAGGGGATATAAGAATTGCAGGATACCCCAAAGTGCAGAAGACTTTTGCAAGAGTTTCAGGTTATTGTGAGCAGAATGATATACACTCTCCATATATAACAGTTGAAGAATCTGTGAAATACTCAGCTTGGTTGCGGTTGCCAAGCGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAGACAATTGAGCTTGATGATATAAAGGATTCTTTAGTTGGCATTCCTGGCCAAAGCGGCTTATCTACAGAGCAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAGCCTACATCAGGTTTGGATGCTCGAGCAGCGGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCTACTGGTAGGACCACAGTTTGCACTATACATCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAAGCTGGAGGGAGGATTATTTATAATGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAGTATACCAGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCAACCTCTGCATCTGTAGAAAAAGAACTTAAAATAGATTTCGCAGAAATCTATAAAGAGTCACACCTTCACCGGGATACCGTTGAATTGGTGACAGAGTTAAGTAAACCATTTCCGGGTTCAAAAGATTTGCACTTTTCAACTCGCTTCCCGCAGAATAATTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCCGAGTACAACTTAATAAGATTCGTGTTCATGGTTGCTGCGGCAATAATATTTGGAGCAGTATTTTGGCAGAAAGGAAAGGAAATAAACACCCAGCAGGATTTGTTCAACGTGTTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGTTCAACAATTCTACCATACGTGGCAACTGAACGCAGTGTATTGTACCGAGAAAAATTTGCTGGAATGTATTCTTCGATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTTGAATGGACACTTCAGAAACTCTTTTGGTACTTCTACACCACTTTCTGCACATTCTTGTACTTTGTGTACCTTGGAATGCTGATCATGTCAGTTAGTGTAAATCTGGATATAGCTTCCGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCTAAAATTCCTAAATGGTGGGTTTGGGTCTACTGGATTTGCCCTACAGCATGGTCCTTGAATGGCCTCCTAACTTCACAATATGGTGACATGGAGAAGGAGATACTCATCTTTGGGGACCAAAAATCAATTGGTTCCTTTCTAAAGGATTACTATGGGTTCAGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTATCCAATTATTTACGCCTTTCTCTTTGCCTATTGCATAGGAAAATTGAATTACCAAAAGAGATAG

Protein:

>Am01G034310.1
MELTPRGRTQGHVLTIERDADSYVEEDKELQSKWAAIEKLPTFKRIKTSFVDEISQDGSASGSGTWQRSSSKRVADVTKLGAVEKRLFIDKLIKHIENDNLQLLQKLRERMDRVNVKSPTVEVRYKNLNVEAECEVVQGKPLPTLWNTFSSLFSGLMKTISCSSQETKMSILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEQSLKVSGEISYNGRKLDEFVPQKSSAYISQYDLHIPEMTVRETIDFSARCQGIGTRAEIMVEITQREIEQGIFPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPTKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQAIQFFKDCGFWCPERKGVADFLQEVTSKKDQRQYWYRTDIPYSYVSVDEFSQIFKTSYWGRMLDDELSKPYDASQSHKNSLSFSKYSLGKWNLFKACMKRELLLMKRNSFIYIFKTVQLTLTAIITMTVFLRTQHSVDLVGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPSSIIKIPFSVLDSLVWTSITYYVIGYSPEITRFFRQFLLLIVLHMSSTSMCRFLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMTYGEIGITLNEFLAPRWQKIQEGNITTGREVLRSRGLDYDSNFFWISVGALLGFAVVFDIGFILALTYLKEPKPSRALVSKKRLSQLTRGERSNEVELKNKSVAVDISHTPRGTQSTGKMVLPFEPLTISFKDVQYFVDTPPEMKNHGSNEKNLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIAGYPKVQKTFARVSGYCEQNDIHSPYITVEESVKYSAWLRLPSEIDSVTKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKAGGRIIYNGMLGHHSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSASVEKELKIDFAEIYKESHLHRDTVELVTELSKPFPGSKDLHFSTRFPQNNLGQFMACLWKQHLSYWRSPEYNLIRFVFMVAAAIIFGAVFWQKGKEINTQQDLFNVFGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFEWTLQKLFWYFYTTFCTFLYFVYLGMLIMSVSVNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWVYWICPTAWSLNGLLTSQYGDMEKEILIFGDQKSIGSFLKDYYGFRHDRLSLVAVVLIAYPIIYAFLFAYCIGKLNYQKR*

Promoter(3k):

>AM01G034310.1
GATAACCTAGTCAGTTTTGTGGTCAAATCGGTGACCCGACCAATCATACCCAGTGTTGAATCAGTAACCCGATGAGTTCAAGCAATTATTAATTTATACTACAAAATGATGTTATTTTTAATAGTGTCTGAGCTATACAATTCAACTAGTAACGCATCGGTCCAATCACTGATCCAATAGTGTGCATTGGTCAATAATCGGTTCGAGTTTAATAACACTGCTGAAAAGAAATGAAAAGTTGTGTCTTAGAAAAAGGGGTTGATTCATAAAAAGGTAACACTAAAAATGATTTTTGGAGGGCTATGTTCTTAAAAAAAAATTCTTCCTCCATTTTAATTTTCACACTCCAATTTTTTCTGTTGCCCCCTTTCATGCATCTCCCAATAATCTACAACACAATCATTACACTTAACAACTTTTCAGATCACAAATAATTTGTGATTGAGAAAATCAATTTCAGATCACAAAGTTTGAATTTTGAAGAAAATCAATTTCAATGTAAATTTTGGTAAAAAATTAGGGGTATTTTGGGGGTAAAACAAGTTATGGGGATCCAAAGAAAGTCAATGAGTGGGGTAAAAAAAAAAAACCAATTAAATATAGTCACTTATATACTTTTTATTTTGTTCATTATTTGGGGGTACGAAACTATCTGATAGTTGGATACCCAACACAAGTTTGTGGAAACTAGATGGCAAATGGCACATGACTTCATAGAGTACTTTTATCCGTGGATGATTAATTAATATATTCTCATTTCCACAAAAAAAAAATCCCCATCACGTGTTCTGCACGTAGTAAATTCAATTCAATTCAGCAACTTTAATTGAGAACTGTGTTACAAGTTGTAATTATCCATAAAAGAAAACACAAGTTGTAATTAAAGAATGAATTAGCAGAAAAAATTGTAACTAAACAACAAAGAGTGAAAGCAAGACAGCAAGGGAAGGGAGGCCAGGCGGCGGCACTCATTGTCATAGCTGGATGCTGAAAGAAGAAGACACATCTAAGAGAAAAAATGGTGGAAAGGTCAGAGTTAGTTACTCTTAAAGATTAAGACCTTAGTTCATTACACTTGTCATGGACAAACCCCTCCACTAAACCCAATCCCACTCGCATAGTGTTATTAAAGTTGTACTAGACTGACCGATTCGATTGAGAACCAATGGTGTGATTGGTTCGGGTGAGTAATTGGATTGGAAATGCATATGATCCGATATGACCTGGTCAGTTTTGTGGTCGAGTCGGTGACTCAACCGATGAGATCGGGTGTTGAATCAATGACCTGACCTGATGAGTTCAAGCAATTTTTATTTCCTACTACAAAATGACATTATTTTTAACAGTGTTTGAATTATACAGTTCAACTAGTAACATATCAGTCGAATCACTGATCCAGTGCCTTGATAGGGTCAATAACCAACACGAGTTAAATAATAACACTATAAGAGTCGTTAATGGGTTTTAAGTTCTCCGTGCGAACAGAGAAATTGATACTTTAACCCCTTGCATTAGTTGATACAAAATCATCAATTATTCTTTTCACATGATAAGTACAGCAAATTTTTGAACCTCATATATAGATGAGTCACAAATACATGTTATTTCAGTACATTTTTATTCAACTAGCCGCCACTGAATTTTGAAAAGTCCACGTGCAAACGCATACTCTGGCATTCAACAAATGTACACTAGAAATTCCAATGAAATTGCTCATCATATTTTGGCTGGGCTCAATATGAAAGGATATGCAATGCAAGGTAATTAAAATATTCAAAGATAAACATATCGGATAATTTTGATCTTTTGTTGAAAATAAAAATAAAAACGTCACATTTTTTTGGGTACATAAACGTTATAATTTAAAAAGCATATTCTTATTATTGACTTTCTTCTCTTTCCTTGTCTGCAATCCATCGAAATAAAAAAAAAAGGCAAGATTGTATTAATTGATATATAATAATATATCTGGCGTTATGTTTCGTAAAAAATAATATACTTACAGCTGGGCATCATAATGGGCAAAAATTAGAACAAAAAAAATTAGATTAAATATTGAATTAACTTATTTTAAGAACAAAAAAAGAGTGAGACAAAGTGCTTTTGTTAGATACAAATCTGGGTCTGTCATTATCTATCACTTGTTGAAAACTAAACCATTTAAAGAGAAAAGAAAAGTGAAAGATATGAAATCTCCTAGCGGTAATCACTTTTCTAATAACTACTTTGATTCAAATATAATGACTTGTTAGTTAAATAAAAAATATTTCATGGGCAAAAACAAAGACTTTTTTGTGTGTACTTGCAGGGTCAAGGAAGTGAACAAGGATGAGGAGATTATATAAAATAATAATAATAATCTTTTTACCATGTTTTTGGTGTACGGTATTTATCGACTTTGCTAGTAACAATTCTACGCTAGGAAATTTTACTAGCCACCGTACCCAGCTTTGCCAATACATGTAGTTTTTCCTTCACATTCAAACTCGAGACTTTAAAATGGCATCCGAACTCAAGTAGGTAGCTTAGTTGGCGAGCTAAGGAATATCGAAGGAGTGCACCAAAAAAGTGCAAAAAGGAGGTACTGGTTCAAACCCCGAAAACTAACATCCCCCACCCCCACTAACATTGCTTATCAAATAAAAAAAATTATAAAATAATAATAATTAATTAAAAGTAAAGGGAGAAGAATTAAATAATGTCCATTCTATTTCAACAACCCTTGTAGTTTTCTTTGTAGATGTAACAAAAAACAACACTCTTGATGGCTAAGCTATTAAATGATTCATTGACAAATTAGATGACCAAATTGTATTATTATTTCTGTTTCCAAAAATCAAGTGGGCCACTCTCAAGAGGTGGCTGCTAATTTTCACACTCCAATTTTTTCTGTTTCCCCCTTTCATGCATCTCCCAATAATCTACAACACAATCATTACTTAACAACTTTTCAGATCACAAAGAATTTGTGATTGAGAAAAGCTTGGAGCTACTTCTTCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01061.27	ABC2_membrane	508	719	2.90E-94
PF01061.27	ABC2_membrane	1162	1374	2.90E-94
PF00005.30	ABC_tran	172	354	3.90E-39
PF00005.30	ABC_tran	864	1016	3.90E-39
PF08370.14	PDR_assoc	724	786	6.80E-21
PF19055.3	ABC2_membrane_7	387	440	2.10E-12
PF12698.10	ABC2_membrane_3	625	765	2.60E-12
PF14510.9	ABC_trans_N	91	147	5.10E-08

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0009507	chloroplast	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR013581	Plant PDR ABC transporter associated
IPR034003	ATP-binding cassette transporter, PDR-like subfamily G, domain 2
IPR029481	ABC-transporter, N-terminal domain
IPR013525	ABC-2 type transporter
IPR003439	ABC transporter-like, ATP-binding domain
IPR043926	ABC transporter family G domain
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A9D4X6F1	_

SwissProt

SwissProt term	Description
PDR3_TOBAC	Pleiotropic drug resistance protein 3

KEGG

KO	Description	Enzyme
K08711	ATP-binding cassette, subfamily G (WHITE), member 2, PDR

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G53480	pleiotropic drug resistance 9
Medicago sativa L.	MsG0880047233.01.T01	_
Oryza sativa L.	LOC_Os02g32690.1	pleiotropic drug resistance protein 15, putative, expressed
Cucumis sativus L.	Csa002634	_
Glycyrrhiza uralensis Fisch.	Glyur000012s00000593.1	_
Codonopsis lanceolata	Cl_chr05_22340T	_
Arachis hypogaea L.	AH01G30940.3	Pleiotropic drug resistance protein 3 like

Expression pattern