Gene detail

Detail information of Am01G034300.1 Annotation

Gene ID	Annotation
Am01G034300.1	S-adenosylmethionine synthetase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G034300.1	mRNA	Chr01	192621140	192624613	+

Sequences

CDS:

>Am01G034300.1
ATGGCGGCGGAAACTTTCCTATTTACCTCAGAGTCAGTGAACGAGGGACACCCTGACAAGCTCTGTGATCAAATCTCTGATGCTGTGCTAGATGCCTGCCTTGAACAGGATCCAGATAGCAGGGTTGCTTGTGAAACGTGCACCAAAACCAACTTGGTTATGGTCTTTGGAGAGATCACAACCAAGGCCAATGTTGACTATGAGAAAATTGTGCGACAAACTTGCAGGAACATTGGCTTTGTTTCTGCAGATGTAGGTCTTGATGCTGATAACTGCAAGGTCCTTGTTAACATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTTCATGGTCATCTAACCAAAAGACCTGAGGAAATTGGTGCTGGTGATCAAGGTCACATGTTTGGTTATGCCACTGATGAGACCCCTGAATTGATGCCATTGAGTCATGTTCTTGCAACCAAGCTCGGTGCTCGTCTCACCGAGGTTCGCAAAAATGGTACATGCCCTTGGTTGAGACCTGATGGCAAGACCCAAGTTACTGTTGAGTATTACAATGACAATGGTGCTATGGTTCCTGTTCGTGTCCACACTGTACTCATTTCCACACAACATGATGAGACTGTTACCAATGATGAAATTGCTGCTGATCTTAAGGAACATGTTATCAAGCCTGTGATTCCTGAGAAGTATCTTGATGAGAAGACCATTTTTCACTTGAACCCTTCTGGTCGTTTTGTCATTGGAGGTCCTCATGGTGATGCTGGTTTAACTGGCCGTAAGATTATCATTGATACTTACGGTGGATGGGGTGCGCATGGTGGTGGTGCTTTCTCAGGAAAAGATCCAACTAAGGTTGATAGGAGTGGAGCTTACATTGTGAGGCAAGCTGCTAAGAGCATTGTTGCAGGTGGACTTGCAAGGAGGTGTATTGTGCAAGTTTCTTATGCCATTGGTGTTCCTGAGCCTTTGTCTGTCTTTGTTGACACTTATGGTACAGGGAAGATTCCTGATAAGGAGATCCTCAATATTGTGAAGGACAGCTTTGATTTCAGGCCAGGCATGATCTCAATCAACCTTGATCTTAAAAGGGGTGGCAATAGCAGGTTCTTGAAGACTGCTGCATATGGACATTTTGGCAGGGATGACGCTGACTTCACATGGGAAGTGGTGAAGCCTCTCAAGTGGGAGAAGGCCTAA

Protein:

Promoter(3k):

>AM01G034300.1
AAAACGTTTGACTTTGTGGAAGGGTCGTTTCTTTTCGATCGGTGGTCGGGTTGCTATCATCAACTCCGTCTTGAATAGCATCCCTCTATACATGCTATCATTCTATAAAGCTCCGAAAGTGGTGATTAAGAAGATGATCAAAATTCAAAGGGATTTCCTTTGGGGTATCAAAGAAGGACACAAGGGAATGTGTTGGGTTGCTTGGGATAAAGTTTGCAAAGCAAAAAAGGATGGCGGTCTTGGTATTAAAAATCTCGAGTTATTCAATATTTCTTTGCTATCTAAGTTGAAATGGCGGGCTTTGACGGATACTAATGTCTGTTGGAGCCATTTGTTGAGACATCGTTATGGGGACTATGCTACTACTTTTGTTCATAACTCGGCTGAAGGTATATCTAGCCGGAACTCGGGATCGATTTGGTGGAGAGACTTGGTAAAGTTGGATGACAATCTTGAGGAACGGCGAAGGTTCGCGTGGTGTATTAAAAGGGGGATTGGTGACGGAACCTCCATTAATTTTTGGAAGGATCAATGGCTAGGCATAGAGCCTTTATTCAAAGTTTTTCCGCTGTTATGTGATGGGGAAGGGCAGCAGCAGCTCTTGGTGGCTGACACGGGTGCTTGGAATGGTGAAGTTTGGGTGTGGTCTACACCGTGGCAACATCACACGGATTCGGTTCGGGTGGCTGGAGGCCAAATTTTGGACAGCATTTTACAATCATTTAAGCCGACTAGAGGAAGGAAAGACGCATGGCTATGGCCACATGATACTTCCAAGAGTTTCACGGTAAAATCTTTTTATCATCAGCTATCTTGTAGTGACATATCTTCCAACATTTCGAACCATCAGCACTTGGTAGGGGGACTATGGAAATCTATTGTCCCTTCGAAGGTTGTAGTCTTCGGGTGGAGGTTACTGTTAGATTCCTTACCAGTGCGTGAGCAGCTGTTGCACAGGAACGTCATCCACTCCGAGTTAGAAGTTGGTTGTTCGTTTTGTAATTCCTCTCGCGAGTTTGTCGAACATCTTTTCATCACTTGTGGTTTTGCACGTTCTGTTTGGCATATTGTTGGTACTTGGCTAGGTGTTGACGTGGTTGTCTCTGTAACAGCCCAGGTCCAACGCATTGGCCACCCCGGCACTATTACCTCACGGTCTTCTCTACCCCTCTTGTAGAATTTTTGCCTTCCGTGGGAATCGAACCTTGCACCTGAGGCATAAGTGGAAGTTAAACACACCTCCCACTACCAAAAGAGAGAGAGTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGACGTTGGGATAGTTGTGTCTCTCTTATAATGTGTTGGTAATGCGTAATATTTACCGATTTTCCTCATGCCGTTCTTTATTTCCAAATATTTATCAATTTTGTTGGTAACTAATTTATGCTGGAGAATTTGATCAGTCACATGTTTTATTCAGTTTTATCGGTTTGTGTGGTCCTATCTTTTTAATAGAGTTTTTATCATATCTAAGACTCAAATTTGACATTGTCAAAAAAATACTCGAATTTGAGACATTGCTATGGGATCATAACCTAATTATCAACAAGGGTTGGTTCAAGCGGTAACTGAGTATTGAATATCACTAATTCAAGGTATCGGATTCAAATCTTGAGTGTGGTAAAAACTGTATTGGGAGTGGAGAGTCACATGAACCGGCAAAGCCGGGTATACACGTTTTAGGTTCATTGAATAATTGATGTATCTGGTCTATAATATCTGTCAGATAAATAAATTATTCAATAAACCTAAAACTGCAAAATTTTCTTATAATAGGAACCAGATTAGAGGATGAGATGAGAAAGATCATGCTTGTTTTTTGGAGATGAGATTAAGAAGAAGATCAACAAGCCCTAATTAAATTTGGGGATTTATTATTTTATCCAAGTCGTGGTCAATTTAAAATAAAAACAAATGAAATAATGACTTGGCAAAACTGATTTGACATTTTGTTAGACAACTTAGCAAATTACTAATGACATAATGACTAATACGAAAAAAAATATATTTGCAGGGCTTTTTTTTTAAAAGATTTATAAGGACTAAAATCAAAAGGCCCTGTATTTATAGGGATCAAAATCATATTTAAGCCTATAAAATAAATAAGAAAAAATGAAAAATATTCTGTCAGCAGCAATTTAATTTAATGATAAATGATAAAGTACAAGGAATATGATATTATTTTTTCAAAATAAATAAATAAGGAAAGGAAAAGAAGAAATCTGAATTCACCTCACCAATCTCAGACGCGGGTTAAAAGTAAACGCGGTTGTCACATGCAAATGGATGAATCTACCCGACTTTCAATCTTGTTACTTAGGGGCCTACACGTCTTTTCACTCAAAATCTGCCAACCAGACTTGCCTATAAATGGAGATCCAAGAATCACGTTAGGACTCACACAGCTTCAGAGCTCAGAGCATCCCTTCTTCAACGCTCTGCTCTTCTTCTACCTCTCAAGTCAAGGTACTCTGCTCTTTCTCACTATTCTTTTGTTTTCTTATTGTCTATTCAATTTGGGAATTTGAATTTGTGTGTTGTTTTGCTTTCGATTTTCTGAAATTGGATCGCTCTTTGGATCCCTAAACTGTTTTTGTCCATTGCGTCTCTTTAATTTATGCGTTCACATGGAAATTCGATTTAGGATTTCAGATCCGGTGGAATTTTGTGTGCTAATGTGTTTTATTATTATATTATCATATTCATAGGCAGCTTATGAGAAATTATTCATTTTTCGGTTGGGGAATTGTAGATTATTTTAGTCTGTTAAATAATGTCACAAATAAAACAACTTTGATCTTGGCCTGCGATAGTGTTAGGTGATTAGTGGAGTTATAATACTTGATAATTTGTGCATGGTTGAAAAAAGGAGTTTTTTTTTTGCTGAATTTTGTGCATAGTGTTTTTAGTTTGTTATTTCATTTTTTGTATGTTGTGTTGTGCAGCTTTTAAAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02773.19	S-AdoMet_synt_C	242	383	1.90E-61
PF02772.19	S-AdoMet_synt_M	119	240	1.20E-48
PF00438.23	S-AdoMet_synt_N	6	103	2.60E-43

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0006556	S-adenosylmethionine biosynthetic process	Biological Process
GO:0005829	cytosol	Cellular Component
GO:0006730	one-carbon metabolic process	Biological Process
GO:0005524	ATP binding	Molecular Function
GO:0046872	metal ion binding	Molecular Function

InterPro

InterPro term	Description
IPR022628	S-adenosylmethionine synthetase, N-terminal
IPR022630	S-adenosylmethionine synthetase, C-terminal
IPR022631	S-adenosylmethionine synthetase, conserved site
IPR022629	S-adenosylmethionine synthetase, central domain
IPR022636	S-adenosylmethionine synthetase superfamily
IPR002133	S-adenosylmethionine synthetase

trEMBL

trEMBL term	Description
A0AAN9I4I1	_

SwissProt

SwissProt term	Description
METK3_POPTR	S-adenosylmethionine synthase 3

KEGG

KO	Description	Enzyme
K00789	S-adenosylmethionine synthetase	[EC: 2.5.1.6]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G17390	S-adenosylmethionine synthetase family protein
Medicago sativa L.	MsG0880047232.01.T01	_
Oryza sativa L.	LOC_Os05g04510.2	S-adenosylmethionine synthetase, putative, expressed
Cucumis sativus L.	Csa001902	_
Glycyrrhiza uralensis Fisch.	Glyur000012s00000594.1	_
Codonopsis lanceolata	Cl_chr05_22210T	_
Arachis hypogaea L.	AH11G25730.1	S-adenosylmethionine synthase like

Expression pattern