Gene detail

Detail information of Am01G034170.1 Annotation

Gene ID	Annotation
Am01G034170.1	myb domain protein 78

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G034170.1	mRNA	Chr01	192042978	192044690	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G034170.1
GTTTTTTTAAAGTTAATTATGCAACGACTTATATATATTTGATAATTGTTTGATATATCTTTCAATATGCAGGCTTCTTCCTGCAAAGGTAGCTTCATCAAACATCACTCATGTCATCCGCAAACGATATTTTCAAACGTTCCATAAAAAGTGGAGCGATGTCGAAGAAGATGAAAGAAATGATCTGCTAGACTTCTTTAGGGTAAGTGTTAATTATTTTGTCATTACTTATAATTGTTTGTTTAAATTTTATGTTTAATAACGTTTAATATAATGCAGACCAAGGTAACTTGGGACACAGAAGACGATGACAATGTGCGGAGAATTTTTTTCAGAAGGATGGGCGCTCAAATTTCTGATTTGCTTTATAAGCTCCGCTGTAAAGATAAGAAGCCTTCCTACATGAGTGATGAGATTTGGAATGCCTTCAAGAGCCATTGGGCTTCACAGGCTTTCAAGGATGCTGCTGCAAAAGCCAAAAATAATAGAAACTCGGAAAAGGGTGGCTCGCTTCACTGCGGTGGGTCCATCAACCAGGCTCAGCATGCTGCTAGAATGGTAAATTATTTTTCAAATCTATGTGTTTTTTATATTATTTAATTAGTTAGCAATTTTTAAAAATGTGTTTCATCTTACAAAGTAAGAAGGCAGGACGCCCTATCACTGCTCCTGAGCTACATAGAGCCACCCATGTGAGGAAAGGCACTGGCGAGTATGTTGATGAGCGCTCCAAGATGACCCAGGTAAATATACATATTGATTTGTATTATATAATGTTCATTTGTCAAAATGGAGCGCTAATTTGTGGTTATTCAAAACAGGAGCAAATAAATGAGTTCATGACGCAGCTAACTCAGGGGAGCTGGAACCCTGATTCATTTGGCCAACTTACTCCTGAGATGAGAGATCTGGCAAACAAACATTGGGAGAAGACAGTAGGTTGGTCTAAGGGTCGCCTGTATGGTACGGGGCCCATGGCTCCATGTATGAGTCAGTCTGGGGCCGAGAGCAGCAGAAGACGGAGTCGACCAGCTTATACTCCTGCGGAGACATAGCATATTAGGCGGCTGGAGCAGGAGCTGCACGAGACTCGACAGGAGGTCAGGACCTCCTCTGAGGCGATGAGAAAGATGCAGCAAGATTATGAGAAGGTGACCCGTAGGCAGGAGCTGATGTTTAAGTATTTTAAGAATATGCAGCAAAATGAGCAGCAGCAAGATGAAGAGAAAGATGAGGAGGAAGCTGAGGAGTCTGATGGTGGCAGCTTTTAGTTTTGTTGATTAAATATTTTGTTATAACATATCAGATTAAGTGTTGTTGATTCAAAATTTATGTTATTGGATAATTTTTATTTTAAACTATTTTATGTATTTTAGATTTTATTATTTATTAATAAAATAAACAGGTATAAAAGCAGATAAAATAAAAAAAAAATTCATCAGGTTGAGCAGTAGCGTGGGAATTAGCGAGGGGCTTAGCGAGGGAACGTGGCCACGTGGTTGATCATTAGCGAGGGCATTAGCGAGGGGGTTAGCGAGGGAACGTTGCCACGTGGTTGAGCAGTAGCGTGGGAATTAGCGAGGGAACGTGGCCACGTGGATGAGTAGTAGCGAGGGAATTAGCGAGGGAGCGTGGCCACGTGGCTGAGCAGTAGCGAGGGATCTAGCGAGAGACACTGCCCTCGCTAATTAGCGAGGGACACTGCCCTCGCTAATTAGCGAGGGACCCATATCCCTCGCTAATCGCATTTGCGAGGAGGGAATTAGCGAGGGAAATTGTCCCTCGCTAATTCCCTCGCATGCAAATGATGTTTAGCGAGGGAATAAGGTGATTTAGCGATGGACTTTTCCGTCGCAAATGACCTTTTTTTTGTAGTGGTGGTTGTACTAAAAGGATCAAGACACACAATCAATAAAACGGAACTACAGCTACTCTGTAGTCGCAGACGTAGGCAAAGTTTGGCCGAATTGCGTGATCAGTATCGCGTCTCCGATTTTGACAGCGTGTTCCCTTAATTTGATAATTATTACTATTTTACATTAAATAGTAAATATAAGTGTTTTAGATTTCAATTTATACATGTAGGGCAGGGAGAAACTCAAATCTCGCGTCATTAAAGATAAATTCTGAAAGGAGTTTACAAAGACACCGCGTGCCAAACCATAATTAGATCTTTCCTATTCTGAACCTCCTTCTTACAATCTTGCAACTCCTTCATGTCTCCTGCTCGCCAACTGAGCTACCTTCCCAGGACATTTCCCTACGAACATTTGAAGTATAGCTTTTTGGCTAATGAAGATTGGCTCAATTGGTAAGAAATTGGTTCATTCCCCGCAAGGGCGTGAATTTAACTCCCACTGGCGACTTAAAGACCTCTTTAGTAGGTGATCTATAAGTACCTCTGTAAATGCTCAAAGAGCTGTGAGGCCTGCGCCCTGACCTTTGTGAGCCCCCGGAGCCCAACTCACCTAAATTTTCTGTAAAAAAAAAAGAAGTATTGATTTTTTAGTGTCTGATTACTCAACACCATAATTTACTTTGTGAATAGTATACATTGAGCCTTTAAAAAAAGGGGTTAAAGCCCACAATATGCATGATCCATTTGTGAAATAAAAAGTGAGAAATAAGTTCATCACTGGTCACGCAAGCGCGCATACAAAAAAGGGGTTAAAGTCAAAGTGTCAAAAGGGTCATACTTCCTAACTATAATTAATTAAGCTCCAAAAACACACTTAAGTAGTTAATGAAATCATTAATTTTTTACTCCTTCTTCCGCCCTCAATCTTTCTCTCTCATCCATCCAATATCCAGCCATCGCTTACTTTCCTACTACTACCGCATTTTTCAAAGCTTCCGTCTTCGTGTGTATTTATAAAAAGCCCCCACCTTCCTTGTAATAATCCAAGACTCTCTCTCTCTCTCTCTCTCTCTCTATTCCCCCATCCCATACTAAGCACAAGATACAAAGTAGAATCTATCTTTGTTTTGAGTTATCAATCA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	22	69	2.30E-30
PF00249.34	Myb_DNA-binding	75	118	2.30E-30
PF13921.9	Myb_DNA-bind_6	25	83	9.50E-19

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB-related

Gene Ontology

GO term	Description	Category
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0005515	protein binding	Molecular Function
GO:1902074	response to salt	Biological Process
GO:0010597	green leaf volatile biosynthetic process	Biological Process
GO:0009737	response to abscisic acid	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR044676	MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A896W1L0	_

SwissProt

SwissProt term	Description
MYB2_ORYSJ	Transcription factor MYB2

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G49620	myb domain protein 78
Medicago sativa L.	MsG0880047211.01.T03	_
Oryza sativa L.	LOC_Os03g20090.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa022057	_
Glycyrrhiza uralensis Fisch.	Glyur000012s00000626.1	_
Codonopsis lanceolata	Cl_chr01_51950T	_
Arachis hypogaea L.	AH01G25950.1	Uncharacterized protein like

Expression pattern