Gene detail

Detail information of Am01G034130.1 Annotation

Gene ID	Annotation
Am01G034130.1	TATA binding protein associated factor 21kDa subunit

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G034130.1	mRNA	Chr01	191950138	191967341	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G034130.1
TTTCGATTACTCTCTCACTCTCAATTTCGATTTCGATTTCCACTCGATTTCTTGCAGATTCCTCTCTATTCCCACTAACTCCTCTCGATTTCGATTTTCGAGTCTGAACTAGCGAGTGCGGTGAGGGTTCTTCGTTTGTGCGATGAGGGTTGAAGAACTGTGAATTAAAGAACTGAAGAACACGAACCCAAAGGTAATTTTCTTTAATCTTTACTGCTTTTGGGTTGTGTATCGTTTTTTTTTCTGGGTTTTAGATGATTCGCTTGTTGCTTTCTTCAATCATTCCTCTCTTGTTTTTTATGTGTTTTTTCTGGGTTTTAGATGATTCACTAGGTTGTGTTGCACTTAGGGTGTTTGAAGAATTTCCTGAGTTTCACTAGTATTTTTGTTGGATCTTGAGTTTCACTAGTATTTTGTTGACAAAATTGTCTCGATAGGATAACTACATATTCTATATAATTGATCCCAATGCAAAATAGTATAACAATTTGCAGTTAGTATTGTGCAATTATCCGAGATTCTGAGCATATCAATTATACTTTAAGGTTTAAATATATATTACCCCCCTGCAAATATACCCATTATCCAGTTACCCCCCTACCAAAAAAAAACATTTAAAACAAACCTTGCAAAATATAAAGTTATCCAGTTACCCCCCTGCCGTTAAATTTTCTGTTAAAAAATGTAAAAAGTCACATATCCAGTTACCCCCCTGCCACGTGTCACCATATTATTGGGCCTCTGTGACACGTGGCACTGACTGCCACGTCAGCATCCTAGTCAACAGTGCCACGTCAGCAACCAATGGATGGCTGCCACGTGGCACTACTTATATCACTCAAAAATAAAGAATTTTGTCCCCAATGAGTGTTGAACCTGTGACCAGCCACTCACACACACACCTCATAACCAATGAGCCACATTAATATTTGTGATTACTAACTCTATTACAAATATATAATACGTATTTCGCAATTAATTTTTCATTTATCATCATCATCATCTGGATTCGTTTCATTTATCATCATCTTGAAGATTTCGTTTCCGTTTCCGTTTCATTTATCATCATCATTGAGCCCAGAAATACTCAACTGAATTACATAATTAATCTTTGATCGAGTTAAGATTCTGTTGCTACTCTATCACTACTTATATCACTCAATTGAATCAATCTCACATTCTGTTGCTACTCTATATGAAAGACGATTAAACGAAAAACGATCTGCGTAATTAATCTTTGATTGAAGGTTTAATCGAAAACGAAAACGAATCTGCGAAAATCGCAAACGAAAATGAAAACGAAGATGATGGAAGATGCGTTTTGGATCTAGGTTAGGATGTGTTTCCAGATGATGAAAACGAATTGATTTCCAGATGAAAACGAAACGAATTGATTCCCAGATCTGGGTTAGGATCTGCGAAACGAATTGATTCCCATATGAAAGATGCGTTTTGGAAACGAATGGAAGATGGGTTAGGATCTGCGAAACGAATTTCTGGGCTCAGTGGAAGATGAATGATGGAAGATGAGTTTCTGGGCTCAATGAATTGATTTCCAGATTTTTTTTCGTTTTCACAGATTTCCAGAATCTTCGTTGTCATCTAATTTATTGGTTTTGATCTGGGCGAGTATCTGGGCGAACCCCCTACTGTTTCTTTGATTTTGATTTGGTTTATTTGGTTTTTCTTCATCGTTCAATTTCCAGTGATGAACTCTTGTTTCCAGTCCACTTCTGTTTCCAGAATTTTTTTTTAAAAAATTTAATTGCGAAATACGTATTATATATTTGTAATAGAGTTAGTAATCACAAATATTAATGTGGCTCATTGGTTATGGGGTGTGTGTGTGAGTGGCTAGTCACAGGTTCAACACTCATTGTGGACAAAATTCTTTATTTTTGAGTGATATAAGTAGTGCCACGTGGCAGCCATCCATTGGTTGCTGACGTGGCACTGTTGACTAGGATGCTGACGTGGCAGTCAGTGCCACGTGTCACAGAGGCCCAATAATATTGTGACACGTGGCAGGGGGTAACTGGATATGTGACATTTTACATTTTTTAACAGAAAATTTAACGGCAGGGGGGTAACTGGATAACTTTATATTTTGCAAGGTTTGTTTTAAATGTTTTTTTTTGTAGGGGGGTAACTGGATAATGGGTATATTTGCAGGGGGGTAATATATATTTAAACCATACTTTAATCCTATTTGCAATGAGATCAATTTTTATAAGTACAATTTAAAATAGAATTCATATTGATCATTTGATTGGTATATCTCCTCCCTTTATAGATGAATGTAGATGAAGAAGTTGTCTCAGAAACTCCTTTTGCGGAAGTTGGAGGTGGCGAGACTCCTAGGAAATTAACGTCGGAAGTGTGGAAGCATTTTACCATAATTGGTAAAGATGAGGAGGGGTATGAAAAGGCTGCGTGTAATTACTGTAGTCATGATGTAAATTTGATTACCAAGTGTAGTTTGTTGCTGAGTTATGATTTATGTAGTGTAATCTGAAATCTGATGTAAATCTAATTTCCAAGTGTAGTTTGTTGCTGAGTTATGATTTCCAAGTGCAACCTTTAAAGTGTTAGTTTTCTGTTGGTAAACATCTGTTGCAAAATAGCAGAAATTCAGGGCCCATAGACTGACCCAAGCCCATGTGGGCTTAATGGGCTTTGGGGTTTTTGTGGGCTTTTTGACCCATGGGCTTTTTGCCCCACGGGTCACATGGGCTTGGGCTGGACTGGCCCACGTGGGCCAAGTTGACGGCTCTAAGCCCAATCCTCTCGTTCTCAATGCTCGCTTTGGCGCTCGCTCTCAATCTATTCTTTATCGTTCTCTCCATTGCCGCTACAAATTTATCTCTCTTCTTTAATTCCATTTTCTCTCACACATTCGCTCGCTCGCGGATACAATTTCTGTCAAGTCAACAATGCAGCCTCCATTTGTGTCAAGTCAACAATGAATGCTCTTTTTTTCCTGAGTGCAGTGGTACAGCT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02291.18	TFIID-31kDa	10	92	3.90E-30
PF15630.9	CENP-S	30	74	5.80E-06

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0065004	protein-DNA complex assembly	Biological Process
GO:0003743	translation initiation factor activity	Molecular Function
GO:0006366	transcription by RNA polymerase II	Biological Process
GO:0006413	translational initiation	Biological Process
GO:0045893	positive regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR003162	Transcription initiation factor TAFII31
IPR009072	Histone-fold

trEMBL

trEMBL term	Description
A0AAN9KZ21	_

SwissProt

SwissProt term	Description
TAF9_ARATH	Transcription initiation factor TFIID subunit 9

KEGG

KO	Description	Enzyme
K03133	transcription initiation factor TFIID subunit 9B

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G54140	TATA binding protein associated factor 21kDa subunit
Medicago sativa L.	MsG0880047208.01.T02	_
Oryza sativa L.	LOC_Os03g29470.1	transcription initiation factor IID, putative, expressed
Cucumis sativus L.	Csa010009	_
Glycyrrhiza uralensis Fisch.	Glyur001694s00031561.1	_
Codonopsis lanceolata	Cl_chr08_22100T	_
Arachis hypogaea L.	AH07G01930.1	Transcription initiation factor TFIID subunit 9 like

Expression pattern