| Gene ID | Annotation |
|---|---|
| Am01G033090.1 | LSD1-like 1 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G033090.1 | mRNA | Chr01 | 188919922 | 188924860 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF01593.27 | Amino_oxidase | 213 | 640 | 8.20E-93 |
| PF04433.20 | SWIRM | 107 | 184 | 4.20E-13 |
| PF13450.9 | NAD_binding_8 | 208 | 269 | 8.30E-11 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | SWI/SNF-SWI3 |
| Epigenetic Regulators | HDMA3 |
| GO term | Description | Category |
|---|---|---|
| GO:0032259 | methylation | Biological Process |
| GO:0048364 | root development | Biological Process |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0045892 | negative regulation of DNA-templated transcription | Biological Process |
| GO:0003677 | DNA binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR007526 | SWIRM domain |
| IPR009057 | Homeobox-like domain superfamily |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR002937 | Amine oxidase |
| trEMBL term | Description |
|---|---|
| A0AAN9KBP3 | _ |
| SwissProt term | Description |
|---|---|
| LDL1_ARATH | Lysine-specific histone demethylase 1 homolog 1 |
| KO | Description | Enzyme |
|---|---|---|
| K11450 | [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase | [EC: 1.14.99.66] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G62830 | LSD1-like 1 |
| Medicago sativa L. | MsG0380014291.01.T01 | _ |
| Oryza sativa L. | LOC_Os02g51880.1 | amine oxidase, putative, expressed |
| Cucumis sativus L. | Csa007925 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000131s00012977.1 | _ |
| Codonopsis lanceolata | Cl_chr05_36300T | _ |
| Arachis hypogaea L. | AH05G27030.1 | Lysine-specific histone demethylase 1 homolog 1 like |