Gene detail

Detail information of Am01G032860.1 Annotation

Gene ID	Annotation
Am01G032860.1	Mitochondrial transcription termination factor family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G032860.1	mRNA	Chr01	188481397	188491476	-

Sequences

CDS:

>Am01G032860.1
ATGATTATTTTAGGAGCTTATTCAGATCAAAATTCATTCACAGTATCTTACCTCACAAACAATTGCGGTTTTTCACCACAAGCTGCTCTTAAAGCATCCAATCGAGTTAATTTCAACACCCCTCAAAAACCCAATTCAGTTACCACCTTCTTCAAAAATCACGGTTTCTCCAATTCCCAAATATACAGCATCATTCTAAGGGAACCAGAACTCTTCGTCTCTAACCCTATCAAAATTAAACCAAAGTTTGAATTTTTAGCTTCCAAAGGTGCTTCTCCCTCTGACATAGTTGCCGCCACTACTAGAAGTCCACGTTTCCTTCGTGTTAGCAGCCTTGAGAATCACATCATCCCCGCTTTTGAATTGGTAAGAAGTTTTTGTCCCTCTGATGAAAAAGCAATTGCTTCTATTATTGTTTGTCCTACTTCTATTAGTGATCCTCGTTTGAAACCAAATATTCAATTTTTACTTGATGTTGGTGTCCCTCCCCCTAGTATTTACCATTTACTTCGTACTAGACCTTCTATAATCTGTTCTAATGATTTGAAAGATGCTGTGGAGGAAATTAAGGAATTAGGGTTTGATACTTCAAAACACATTTTTTGTGTGGCATTATTGACCAAAAGGGCTGTCACTAAATCCCAATGGGATGCTAAAGTTGATGCTTTGAAAGCAAGGGGTTTCTCTCAAGATGCAATTTTTAAGGCATTTAGGAAACACCCTAACTTTATGCTACGGTCTCCGGATAAACTCAATGCAGTGACGAGTTTTTGGATTGATAAGCTTGGTTGGGATCCTTCATGGCTCATGGAAGCACCTATACTTTTTGCACCTATACTTTTTGGTTATAGTTTAGAGAAAAGGTTTATTCCAAGGGCTTCAGTTGTTCAGTATCTTCTTTCCAAAGGGCTGATTAAGAAGGATTCTAACCTAGCTACTCCATTTTGTTTGACTGATGAGCTTTTCCTGCGAAGGTATGTGAAACGATTTGAGGAGGAAACATCTAGGCTATTAAAGCTATATCAAGGATATAGTGCATGA

Protein:

Promoter(3k):

>AM01G032860.1
TCCCTGAAAAAGAGATGGAAGGAGCTTTTCTATTTTGTCGAGCCTGTTAATGATAAGGCGATAGACTGCGTGGGCAAGTTCAGCGAAAACGGGCAATCTCTGGAGTCTACAAAGTTTCCCATTGGTTGGAGCCTCGGTCATTATAACCGTCCCACTCAGTTAGTGAGTCACAGTTGAGCGATGAAGACAAAGTAACCAAAAATATTCTGACCTTCATTGCAACTCGGATTCCTTACACTAAAGAGAAATTCCGAGGTTTTCCTACTGATCGTTTGGTTAACCCCGGTAAAAGATCGGACGTTTTAAGGGTCTTAGGTAGGTCATCAAATATTTGGGTACTTCATGTTCTTACTCGTTTTAAGTGTCCTAACTCGTTTGTTTTCTTCTTTCTTTGCAGATACGGTGGCCAGTGATAAGTTTTCATTTTTGAAGGCCCTTGCTGTAGAGGATGTCGGGGTTGTGAATCTTGTAGACGAGACTGAGATGGCCCCTGATCATTCTCCTCTTTGTGAAGTAGCTGTTCATGCACTCCGATCACCACCGTTTCCCTGAAAGATCTGGAGGCTCAAAATACCGATCTTCAGCCTCGGTCACGACACAAGCGGACTAGTCAGATGGATCGCCCCCCCTAAACATTGTATCTTCCTCTTAAAATCCAGGAAAAAGGGGCCGATCCGATCATGGAGGTGATCCCAAGGCTGCCAAGAAGAGTCGGGAGCATACTTCAAAGAAGCATAAGTCCAGCAGTGTTCCTTTGGATGCCGACTTTCTGAAGAAGAATTTTGAAGATTACCGCGCCGACCCTGTTGGTGCCCCGGCACAATTGTTTTTGCATTCTGCCGAGATTGCAAAATCTGAGCGGGAGGACATTGAACGTCGGGCCAAAGGTATTTTGCTAAGGTCGCTTTTCTTTTGTTCTAAATCGTCTCTTTTAACTCGTGCATTTTTTGTTTGTGTATAGAGGAATTGCAAGCTGAGAAAGTTCTATTGGAGAAAGCCCTGAAAGAATTGGAGGAGAAGTCTGTTGCTTTGATTAAAGCAAAGACCGACTTTACCAATCTGCAGCATGACAGGGATGAGCTAAAAACTGCGAAGGATTCCGCCAATAGCCGAGCTGAAGATTTGGCCCTTTCGGGTCAAAGAGTTAGAAGCTTCAGAAAACCAGGTCAAAGAGAAGATTCTGACCCTTGAGAGTCGGGTGACGGAGCTTGAAGATGCTTTGAAGAAAGCTGAAGAAGGAAGGACGGAAGCAAGTTTGGACCCTCGAGGCCGGATTGCCGTGCTTGAAGCTGACTTGAAGAAATTTAAAGCTGCGGTGGCCAAAGCAGCCAAGCTCGCTCTCGAAATGGCCGGGGAAGGTTATGATAAAGCTCTTCAGCATGTGGCTTTGATCCACCCCTCAGTTCCCCTTGATAGGGAGGTTTTTCATGTGGACAACGAGGTGGAAGAGGGTCGGATTGACAAGGTCAACCAAAACACCAAGGAGAAGACAGTCGTCTATCCTTCATACGACGTTTGATCAAGTTTGTTTGTAGTGCTCAATTTTTTGCAAGAGTTCTGGGTTTATACAAAGTAGATCGTGCATAAGCCCAGAATTCTGAAGTAATACCAATTTTTGTAATAGATCAGTATTCTGAAACTTTGAGGACCCGCCATATCCGGGGTTGTTTTGTAATGATCTGCAATTTAATCGGTTTTTTGCGTGAACGTGTTTGTATGATTGTATTTATTTTACAAATTATATCTGTCGTCCTAAGGATAGTTTACTGGGACTCGGCCCAGATCGAACTCATCCTTTAGGGTTTTTTGACTGCATCGGTCAAGGGTTGTTTTTTGAGGATTGAATCCTAGAGACCTCATATAATTGTATTTATTTTACAAGTCATATACATCGTCCTAAGGACAGTTTACCGGGACTCGGTCCAGATTGAACTCGTCCTTTAGGGGTTTCGGCAGCAGTGGCCGAAATTCGTTTTTGAGGATTGAGTCCTAAAGACCTCTTATGATTGTTTTTTCAAGTCATATACGTCGTCCTAATGACAGTTTACCGGGACTCGGCCCAGATTGAACTCGTCCTTTAGGGGTTTTGGCAGTAGTGGCCGAAGGTCATTTTTGAGGATTGAATCCTAAAAACCATAATGTCCTTTGGGACAGTTTATCGGGAGTCGGCCCGGATTGAACTCGTCCCTAAGGGTTGCTTTGGGAGATCCGTCGATCAATCCCGGATCGTCTCTTTCGAAGGAAGGAGCCTTGTCCAAAGTAGTTTTGAAGGAGTGGAATACGAAATAAGTAGTTTGGGAGTAGGCAAAGTCGTCTATCCAATTTATATTTGGGATAAAGTACCGTTCACAATTTGAGTAGGTTGCCCGAAAACTGATATTTTTCCGATTTAAAGAATGTGGTTTCATTACAATTTGAGTAGGTTGCCCGAAAACTGATTTTTTAGCCTAAATTATTCTCTCGACGTACAATATCGTCACGTGTTAACGAACCACACACTAAACAGAACCAAAAGACGGTCGAAATTTGTATCTAAAATTTTAACTGAGTTATTTATTAATTAGGTTAACAAAGCGGATTTACCCCCACATAAGGTAAATCCGCTTTGGTTATTTTTAAAAGCGGATTTACCTTATATGGGGGTAGATCCGCTTTTAAAAATAACAAATCGGATTTACCCCCAATTAAGGTAAATCCGATTTGTTATTTTTCAAAGCGGATCTACCCCATCTTAAATAAATCCGATTTTATTTTTTTAAAATTTTTAGTTGAAATCGGATTTACCTAAATCCGATTTAAATTTTTTAAATTTTTTAGTGGAAATCGGATTTACCTAAATCCGATTTCCAAAAAAAAAAAATTGAAATCAGGATACGTTCGGGATTTTTAATTTTTGTGAAGGGCAATTGCGTCTTTTTGCAGGGTCGATGGGGGTAGATAGGGAGGTGGTGGGGGTACAAAAAAAACCCTTAGCTATATCAAGAGTAGGTCTCGTGCTTA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02536.17	mTERF	50	196	1.40E-28
PF02536.17	mTERF	214	322	1.40E-28

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Gene Ontology

GO term	Description	Category
GO:0006353	DNA-templated transcription termination	Biological Process
GO:0003690	double-stranded DNA binding	Molecular Function
GO:0043231	intracellular membrane-bounded organelle	Cellular Component
GO:0005737	cytoplasm	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process

InterPro

InterPro term	Description
IPR003690	Transcription termination factor, mitochondrial/chloroplastic
IPR038538	MTERF superfamily, mitochondrial/chloroplastic

trEMBL

trEMBL term	Description
A0A2Z6LG79	_

SwissProt

SwissProt term	Description
MTEF5_ARATH	Transcription termination factor MTERF5, chloroplastic

KEGG

KO	Description	Enzyme
K15031	mitochondrial transcription termination factor family protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G07900	Mitochondrial transcription termination factor family protein
Medicago sativa L.	MsG0880047033.01.T01	_
Oryza sativa L.	LOC_Os05g33440.1	mTERF domain containing protein, expressed
Cucumis sativus L.	Csa006028	_
Glycyrrhiza uralensis Fisch.	Glyur000152s00012690.1	_
Codonopsis lanceolata	Cl_chr01_57570T	_
Arachis hypogaea L.	AH17G24750.1	Uncharacterized protein like

Expression pattern