Detail information of Am01G032290.1 Annotation
Gene IDAnnotation
Am01G032290.1 XB3 ortholog 2 in Arabidopsis thaliana
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G032290.1mRNAChr01186141935186147342-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF12796.10Ank_220812.40E-31
PF12796.10Ank_2831392.40E-31
PF12796.10Ank_21762392.40E-31
PF13637.9Ank_4521041.90E-29
PF13637.9Ank_41812391.90E-29
PF13857.9Ank_5701091.60E-23
Gene family
Gene familySubfamily
----

Gene Ontology
GO termDescriptionCategory
GO:0046872metal ion bindingMolecular Function
GO:0005634nucleusCellular Component
GO:0005886plasma membraneCellular Component
GO:0016740transferase activityMolecular Function
GO:0005737cytoplasmCellular Component

InterPro
InterPro termDescription
IPR017907Zinc finger, RING-type, conserved site
IPR001841Zinc finger, RING-type
IPR036770Ankyrin repeat-containing domain superfamily
IPR002110Ankyrin repeat

trEMBL
trEMBL termDescription
A0A1S3EC83 _

SwissProt
SwissProt termDescription
XB32_ORYSJProbable E3 ubiquitin-protein ligase XB32

KEGG
KODescriptionEnzyme
K19044E3 ubiquitin-protein ligase XBAT32/33[EC: 2.3.2.27]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT5G57740 XB3 ortholog 2 in Arabidopsis thaliana
Medicago sativa L.MsG0880047539.01.T01 _
Oryza sativa L.LOC_Os02g54860.2ankyrin repeat-rich protein, putative, expressed
Cucumis sativus L.Csa019498 _
Glycyrrhiza uralensis Fisch.Glyur002867s00037025.1 _
Codonopsis lanceolataCl_chr08_20500T _
Arachis hypogaea L.AH11G34740.1E3 ubiquitin-protein ligase XBAT32 like

Expression pattern