Gene detail

Detail information of Am01G031940.1 Annotation

Gene ID	Annotation
Am01G031940.1	Cellulose synthase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G031940.1	mRNA	Chr01	185022893	185029752	+

Sequences

CDS:

>Am01G031940.1
ATGGAAGCCAGTGCTGGACTAGTCGCTGGTTCTCATAACCGCAACGAGCTCGTCGTCATCCACGGCCATGAAGAGCATAAACCATTGAAGAATTTAGATGGTCAAGTGTGTGAGATATGTGGGGATGATGTGGGAGTTACCGTTGATGGAGATTTGTTTGTGGCATGCAATGAGTGTGGTTTTCCAGTTTGTAGGCCATGCTATGAATATGAAAGAAGGGAAGGGAGACAACTTTGTCCACAGTGCAAAACCAGATACAAGCGTCTCAAAGGGAGCCCGCGAGTGGAGGGAGATGAAGATGAGGAAGACGTGGATGATATTGAGCATGAATTTAACATTGATGACAAAATGCATGACCATTCTGCTGAGGCCATGTTGCATGGGAAGATGAGCTATGGAAGAGGTCCTGAAGATGATGAGAATGCTCACTTCCCAGCTGTTATTGCTGGAGGTCGCTCTCGGCAAGTGAGTGGGGAGTTCCCAATATCATCTCATGGTTATGGGGAACAAATGTTTTCTTCTTCACTGCATAAAGGAAGTGGGGGGTGGGATGAAAAGAAAGAAGATGGATACAAAGATAGAATGGATGACTGGAAATTGCAACAAGGAAATTTGGGACCTGAACCTGATGAAGATCTAGATGCAGCTATGTTGGAGGAAGCAAGGCAACCATTATCAAGGAAAGTTCCAATAGCATCTAGCAAAATCAATCCATATAGGATGGTGATTGTGGCGCGGCTTGTTATTCTCGGCTTCTTCCTCCGATACAGAATCTTGAACCCTGTACATGATGCATTTGGGCTATGGCTAACTTCTATTATATGTGAAATATGGTTTGCTTTTTCATGGATCCTTGATCAGTTTCCAAAATGGTATCCCATTGATAGAGAAACTTACCTTGATCGTCTTTCAATGAGGTATGAGCGCGAGGGCGAACCTAATATGCTTGCGCCAGTTGATGTCTTTGTTAGTACTGTGGATCCCATGAAAGAACCTCCTCTGGTTACAGCAAACACAATTCTTTCGATCTTGGCAATGGACTACCCCATTGATAAGATATCATGCTACATTTCTGATGATGGAGCTTCAATGTGTACATTTGAGTCTCTGTCAGAAACAGCAGAGTTTGCCAGAAAATGGGTGCCATTCTGCAAGAAGTTTTCTATAGAACCTCGAGCACCAGAAATGTACTTCTCTGAGAAAATTGATTACCTGAAGGACAAGGTGCAGCCAACTTTTGTCAAAGAGCGTCGAGCCATGAAGAGAGAATATGAAGAGTTTAAGGTTAGGATCAATGCACTTGTTGCAAAAGCGCAGAAGGTTCCTCCAGGAGGGTGGATTATGCAGGATGGGACACCATGGCCAGGAAACAATACTAAGGATCATCCTGGTATGATTCAAGTCTTTCTTGGTCACAGTGGAGGTCATGATACTGAAGGAAACCAGCTTCCTCGTCTGGTTTATGTCTCCAGAGAGAAAAGACCTGGATTTCAACACCATAAGAAAGCCGGTGCCATGAATGCTCTGGTGCGGGTCTCTGCTGTGCTCACAAATGCTCCTTTCATGCTGAACTTGGATTGTGATCATTATATCAACAACAGCAAGGCTGCCCGAGAGGCCATGTGCTTCTTGATGGACCCCCAAACTGGGAAGAAAGTCTGCTATGTCCAGTTTCCTCAAAGATTTGATGGCATTGATACAAATGATCGTTACGCCAACAGGAATACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGTCTTCAAGGTCCTGTATATGTCGGCACAGGGTGTGTATTTAGAAGGCAAGCTTTATATGGCTATAGTCCTCCCAAGGGTCCCAAGCGTCCCAAAATGGTAAGCTGTGACTGCTGCCCATGTTTTGGAAGGCGCAAGAAGGTTAAGTATGCAAAGAATGATGCAAATGGAGAGGCTGGAAACCTAAGAGGAATGGATGACGACAAAGAGATGCTTATGTCCCAGATGAATTTTGAGAAGAAATTTGGGCAGTCATCAATTTTTGTGACTTCAACCTTGATGGAAGAGGGTGGTGTACCTCCCTCCTCAAGTCCAGCAAGCCAGCTTAAAGAAGCCATTCATGTAATCAGCTGTGGATATGAAGATAAAACTGAATGGGGGATTGAGCTAGGTTGGATTTATGGGTCTATTACAGAGGATATTCTAACAGGTTTTAAGATGCATTGTCGTGGTTGGAGATCCATATACTGTATGCCAAAGAGAGTAGCATTCAAGGGTACTGCTCCTATCAACTTGTCAGATAGACTCAACCAGGTGCTTCGTTGGGCCCTTGGCTCCATTGAGATTTTCTTCAGTCATCATTGTCCTTTATGGTATGGCTTCAAGGAAGGAAAGCTGAAGTGGCTGGAGCGATTTGCATACGCAAACACAACAGTCTACCCCTTCACCTCCATACCTCTAGTTGCCTACTGCATTCTTCCTGCTGTTTGCTTACTCACTGACAAATTCATCATGCCACCGATAAGCACTTTCGCCGGTTTGTACTTCGTTGCTCTCTTCTCTTCAATCATTGCAACGGGCATTCTTGAGCTGAAATGGAGTGGAGTTAGCATTGAAGAATGGTGGAGAAATGAGCAATTTTGGGTCATTGGTGGTGTATCAGCACATCTCTTTGCTGTCATACAAGGTCTTCTGAAGGTTCTGGCTGGAATCGACACTAACTTCACTGTTACATCCAAGGCAACAGATGATGAGGAATTTGGTGAATTATACACCTTTAAGTGGACTACTCTCCTAATTCCTCCAACCACTATCTTAATAATCAACATTGTTGGGGTTGTTGCTGGAATCTCAGATGCCATAAACAATGGGTACCAATCATGGGGGCCTCTATTTGGAAAACTCTTCTTTTCCTTTTGGGTGATTGTCCATCTGTATCCATTCCTTAAAGGTTTGATGGGTCGGCAAAACCGCACACCAACCATTGTTGTGATATGGTCAATTCTGTTGGCTTCCATTTTCTCCTTGCTATGGGTAAGAATTGACCCATTCGTGCTCAAAACTAAGGGACCTGATACCAAGTTATGTGGAATCAACTGTTGA

Protein:

>Am01G031940.1
MEASAGLVAGSHNRNELVVIHGHEEHKPLKNLDGQVCEICGDDVGVTVDGDLFVACNECGFPVCRPCYEYERREGRQLCPQCKTRYKRLKGSPRVEGDEDEEDVDDIEHEFNIDDKMHDHSAEAMLHGKMSYGRGPEDDENAHFPAVIAGGRSRQVSGEFPISSHGYGEQMFSSSLHKGSGGWDEKKEDGYKDRMDDWKLQQGNLGPEPDEDLDAAMLEEARQPLSRKVPIASSKINPYRMVIVARLVILGFFLRYRILNPVHDAFGLWLTSIICEIWFAFSWILDQFPKWYPIDRETYLDRLSMRYEREGEPNMLAPVDVFVSTVDPMKEPPLVTANTILSILAMDYPIDKISCYISDDGASMCTFESLSETAEFARKWVPFCKKFSIEPRAPEMYFSEKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKVPPGGWIMQDGTPWPGNNTKDHPGMIQVFLGHSGGHDTEGNQLPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAAREAMCFLMDPQTGKKVCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGLQGPVYVGTGCVFRRQALYGYSPPKGPKRPKMVSCDCCPCFGRRKKVKYAKNDANGEAGNLRGMDDDKEMLMSQMNFEKKFGQSSIFVTSTLMEEGGVPPSSSPASQLKEAIHVISCGYEDKTEWGIELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRVAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCPLWYGFKEGKLKWLERFAYANTTVYPFTSIPLVAYCILPAVCLLTDKFIMPPISTFAGLYFVALFSSIIATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGLLKVLAGIDTNFTVTSKATDDEEFGELYTFKWTTLLIPPTTILIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSILLASIFSLLWVRIDPFVLKTKGPDTKLCGINC*

Promoter(3k):

>AM01G031940.1
ATTTGATGAATTCAAAACTAGGTGGTATCGTTTGGGGATGACCCTTGACGCAGTACCTGCCTATGGGTGCCAGCTTATGTATAACTTGAGCACAAATCTGTCGTTACATCTCAAGATGTAGAGTGTGCAACTTACATACCTAACGACTTGAAGATAGCTTAGTTTTGAAGTGCTTACGTTTGAAGAATGCTAACATCATATGTGTGTGTATTTTTAGCTCACGTTAGTAAACAGAACGTACTACTAAAAGGTGAAAGCAACACGTATGCACTTTCTGTATATTCTAATTCTAATATTCTTGAAGTTTTGTGCCGTGACGTAAAAGCTTTTTCTTTTAAATGTGTGTCTGTTCTTCTTGGGATATCCTTAAAATTTCTTATGGAAAATGTTAACGCGTATATGTAGATAACCCTAAACATTGTACCAAACATGCCAAGGGTCCTTTTTAATTTTTTTTTGATAGAATTGATTATGTTTGAAAGAAAAATGTAGAATCTTTTTTAGGATATAATAAATAAGTAGGATGTGTTTGGATGAAGTATTGTTTTGGGGATAAAGTATTGTTTTGGTAAAATATTTCAATTCTCCCTAAAAATTACATTATCCCCAAAAAATATTTTATCTAAACACACTCTTATAGTTTTGTGGGTCAAACACGGTCTAATGTCTATAATTGATTTTATCTTTTTTTGGTTTAGGGGTCTTTGACCCCCTCCGATATTCAAGGGAAAGGGGTCCTGAATAATCCAGAGTTCGGCCGAGAGGTAAGTAAAGTCTGACTCCAATTTGTTCCATCGCCAGGGATTGAACCCGGGTACTAGTCGAGTCTGCCCCTTAAGATGGAGTGCATTAACCACTTGCACCCAAACTTGGAGTTCTATATTGATTTTATCTAATGCCAAAGGTAGGAATTATTGGCTTATAATATCAAAAAACAATTCTAATATTGTTATTTTCTCTCTTCTTTCCAAACAAATGCAAAAATTCCAATTGATTTGTCAAATAGTAATAAGAATGAGTATTCATTCTCATAAAATATGGAGTTAACCATATTAATGAAAAATTAGAATTATTTGATTTCTATCATATATTTTCATCCATTTCAACATTTATAATTGTTATTTTGACGTATGGTGAGCTTTTGATTTCTCGTGCAAAGATTATTCGCTTTCAAAGCCAGTCATGTAATTAATGCATTGACTATGTGAGATTGACACTCCTCCTTGCTTGCTTTGCTTGCAGTATTTGATTTATGACCAACCAAAAAATAGTAGCTATGCAAAAGATAAATGTGGGAAACAATATACAAAAGCCAACCGTATATCTCATTTTTTAGCCAAGCAAATTTTTGGCAAAACTATATATTTGTTCCTTTATTTTAATTTAAAATTTCACTTTAGTTCTTTGTCTTTTGTTTGTGTTAAATAGGTTTTCTATCTTAATATATACTTAATCTAATTTCTCATCCATTTGTTACATTAATGTGCGCGTGAATGTTACAAGACATGCTTATATATTTTATCCGTTTAAACAAAACGCAAAGAAGAATATAGGCCATATGATTTCATATCCTAAGAAAGTCTCATTTTTCTTAAAGAGGATTTGTATAAGAAGGTTTTAACGAAACTTTCTTTCTTCTATTTACCTAAAAAAGCATCATGGTTGAGGAAAGAAAATGATGAGATGTCATCTTCAATGATAAAATAAAACACATAAGTAAGTATGCTACGTAACGGTTATGCACATGGACAAACAGAAGGGTGGTCTAGGGTTGTCACTCCCATTTCTATTTTTTTTAACAAATACAGAAGGAATAGTTATACAGTGTGATCTTAATCAAGTGGTTCAGTAGTGAATAACTTTAATGCATTGTCAGATTTATCATAATAAACGAGGAACTAATGAATCAAAAACAAAAGAGAGAACACCTACAGATACTCATACACAAATTACACAATCCCTTTTCTCCACCAGCATTCATTGTTCACAGTCCAGCTACAAACGCTCGATTTTCTTCTCTATTCAAACTCTCATTTTCAATCCCTCAAAAGCCTAATAGTAGATTTTTTAATAACATGGTGAAACTCATCCATTTCCTAGCCGATTGTTTTATTACTTACATTTGAGAGGAAGATTGCTAAAATGTTTATTTTTTATTATTAATTATTTTATTGATAAATTTTATGATATGATGAAAATTGATGAATTTTATGATATGAAAGAACGTCTTTGGCTTAGATAAAAGGACGTTTTATTTTTGACAATGGATAAAAAGACGTATGATGTGCACGATATAGGCATTTTTATGATTTAATGTTTATTATTTTATGACATTATTGTATAACTATTTAACATTAATTTGTTATTAAGTTTTTTTTTGACAAATTAATTTGTTATTAAGTTTTTCGCCCCAGTTATTGTCAAAAAAAGTTTTTCACCCCAATGTGAACAATTCCTAGATCCGTCTCCAACTACGCGAGCATTAGTGTAATGAAAATGGATGAGAAATCAAATTAGGTCCAATGGGATCATTTCAAAAAAAAAAAAGACATGGGGAAGTCGGTTCCCAAGTTCGAACCCGAGTGTGATCAGTGGTAGTGCGCGCGCGTGATGTTTATGTGCTATTTCATCAAAAGTAAACCAAAAAAAATAAATAATAAAAGACCTATTTGACAAAAAAATAGTAAATATGCAATTTTCCTAAAAATTTTAAAAGATTGAAAAATATAGAAAGAAAAGAAGGAAGTGCAACATTTACACATCACCAACCTGTAGTCGTTGTCTGAGATAGCATGTGAGATTGGAAGAAAATGGTGGTTGAATAAAAAAGGAAGAAGCTTAGCTTCAAGGCAATGGGGACCCTGCAACCAACATCAGCAGCAGCAGCACTTATTAGGTAACAACACGTAGTCCTTCAAAGCCCCACAAATTTTCCTTCATAAAACATAAACTTCCTCTCAAACTCACCACTTCATTGTCTCATTTCACCACCACCAAGAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF03552.17	Cellulose_synt	319	1021	0
PF14569.9	zf-UDP	27	104	5.20E-42
PF13632.9	Glyco_trans_2_3	718	811	8.90E-06

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT2

Gene Ontology

GO term	Description	Category
GO:0009507	chloroplast	Cellular Component
GO:0009834	plant-type secondary cell wall biogenesis	Biological Process
GO:0045488	pectin metabolic process	Biological Process
GO:0010383	cell wall polysaccharide metabolic process	Biological Process
GO:0006413	translational initiation	Biological Process

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR029044	Nucleotide-diphospho-sugar transferases
IPR027934	Cellulose synthase, RING-type zinc finger
IPR005150	Cellulose synthase

trEMBL

trEMBL term	Description
A0A1S2YP67	_

SwissProt

SwissProt term	Description
CESA7_ARATH	Cellulose synthase A catalytic subunit 7 [UDP-forming]

KEGG

KO	Description	Enzyme
K10999	cellulose synthase A	[EC: 2.4.1.12]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G17420	Cellulose synthase family protein
Medicago sativa L.	MsG0280008107.01.T01	_
Oryza sativa L.	LOC_Os09g25490.1	CESA9 - cellulose synthase, expressed
Cucumis sativus L.	Csa012242	_
Glycyrrhiza uralensis Fisch.	Glyur001924s00034863.1	_
Codonopsis lanceolata	Cl_chr08_27460T	_
Arachis hypogaea L.	AH01G23590.1	Cellulose synthase A catalytic subunit 7 [UDP-forming] like

Expression pattern