Gene detail

Detail information of Am01G031810.1 Annotation

Gene ID	Annotation
Am01G031810.1	cyclic nucleotide gated channel 5

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G031810.1	mRNA	Chr01	184726751	184733842	-

Sequences

CDS:

>Am01G031810.1
ATGTTTGACTGTAGTACTAGTTACAAATCACAGTACATGGATGGCCAGCGTGAAAGTTTTATGAGGTGGGATGTCTTGGATTCTAGACTATCTTCGTCTTCTGATGTTGGAGTTAATAAATCTGGATTTGGGATTGATAAGTTAAGCCATGGTAGTCATGGAAGCGGCACAACATCTAGGTCTTTTAAAAGAGGAGTGATAAAGGGATCTGAAGGACTGAAGTCAATTGGTCGATCACTTGGATTGGGGGTATCTAGGGCAGTGTTTCCGGAAGATCTTAAAGTGTCTGAAAAGAAGATATTTGATCCTCAAGACAAATTTTTACTCTTGTGGAATAGGCTATTTGTTATCTCATGCATTTTGGCTGTGTCTGTGGATCCACTGTTTTTTTATCTCCCTGTCATCAATGATCAGTTACACTGTCTGGGTATAGACAGAAAGTTGGCAACAATAGTTACCACCTTGAGGACAGTCATTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGCACAGCTTATATTGCTCCATCATCTCGTGTCTTTGGGCGGGGTGAGCTTGTGATAGATTCAGCACAGATAGCCAAGCGATACTTGCGACGGTATTTCATCATCGATTTCCTAGCAGTGCTGCCGATACCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAAGTTCAGATGTACTAGCAACTAAGCAGGCGTTGCTGTTCATTATCTTGCTTCAGTATGTTCCTAGATTTCTTCGAATGGTACCATTAACTTCAGAACTTAAGAGAACAGCTGGTGTTTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTGTTATACATGCTGGCCAGTCATATAGTTGGTGCTTTTTGGTACTTGTTAGCTATTGAACGCAACGACTCATGCTGGCAGACAGCTTGCACTGACAACGGATGCAACACAAACTACCTGTACTGTGGCAACCAGCACACCGAAGGTTATAGTGCCTGGCAAAATAGAAGCAAGTCTGTTCTTGAGTCTAAGTGCTCTGCAGATGATGATCCTCCACCTTTTGATTATGGAATTTTCACGCAAGCCTTGACATCTGGTATCATTTCATCTAAGAAGTTCGTCTCGAAATATTGTTACTGTTTATGGTGGGGGCTCCAGAATTTAAGTACCCTTGGTCAGGGGCTTCAAACTAGCACATATCCTGGGGAGGTGATCTTTTCAATAGCACTAGCTATATCTGGCCTCATCCTCTTTGCGCTTCTGATCGGCAACATGCAGACATATCTTCAGTCTCTTACCCTTAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCACCAGAGCTTAGAGAGCGTGTGAGACGGTATGATCAATATAAGTGGTTGGCAACGCGTGGTGTAGATGAAGAAATTTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATCAAGCGCCATCTCTGTTTGGCTTTAGTGAGGAGGGTTCCGCTATTCGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAGCCATGTTTATTTACAGAGAATACTTACATTGTTCGGGAAGGAGATCCAGTTGACGAGATGCTTTTCATCATACGTGGACGCCTTGAGAGTGTTACCACAGATGGTGGAAGGAGTGGATTTTTCAACCGTGGTTTCTTAAAAGAGGCTGACTTCTGTGGGGAGGAGCTTTTAACCTGGGCCCTGGACCCCAAATCTGGTTCAAATCTTCCATCTTCTACTCGAACAGTTAAGGTGTTAACAGAGGTAGAGGCTTTTGCCTTGACTGCAGATGAGTTGAAATTTGTCGCCAGTCAGTTTAGGCGTCTTCACAGTAGACAGGTTCAACACACTTTCCGCTTTTACTCCCAACAATGGAGAACTTGGGCTGCATGCTTTATTCAAGCAGCTTGGCGTCGGTATTGTAAAAAGAAAATTATGAAGCTTCGTCAAAAGGAAGAAGCTGATGAATCAGAAGGAACTCACGGAAGTTCGGGTGGCAGTTCTTCCAGCCTTGGTGCTGCTTTGTTAGTCTCAAAGTTTGCCGCACACACTCTTCGTGGGGTACACCGCAATAGACTTGCGAAAACTGCTAGGGAGTTGGTGAAGCTACAGAAACCTCCTGAGCCTGACTTCACGGTAGATGATGCAGAATAA

Protein:

Promoter(3k):

>AM01G031810.1
TAAATTATTAAGGTAAAAATTCTAAGCAAATAAAATCGTGTGCATCTAAAATTACAAAATTGTTATGACGTAATATGGGTTGGTTCGGGTTCGCGGATTTGATTTTTAAAACCCGTTGCCCGATCCAAACAACTACGGGGCGGTTTGGATTTGTTCGATTTTGACCCGAACATGAAAAATATCCGAACCAAACATATCGGTTTGGATTGGATCGTGGGTTGGTTTGGATTTGCCCGAACCACTGAACACCCCTAATGACAGATGAAACTTTTTAAAAAAAACCAAAAGCATCAAAAAAAATCTACATGTTTTTGTATTTTCGAATTCTATAATAGAGAAAAAGAAAACAACCTACTCCTGTTGCTTGCTGCTAAGCCTGCTTACTGCTGCCTCTCTATTGCTGCTTCTGTCGTTCCCACTTGTTTCAGAAATTTTTTGATGCTTTGTGGTTAGGGTTTCAGTGTGAAACCCTAAATTTTGCTCTGAATTTTTGTATGAATTTTCTCTCAGTTTTTTTGTGTGTGTTTTTTCTCTCAATTTTTGTGTGAATTTTCTCTCAGTTTCTGTCTCCCTTTCACTGTTACTATTCCCTTGTATTTATAGTGAAAAACTGAGGTGTAGGTGGGGTGTTGATGCAACAGATCAAAACTCAATAGAGGACAAAAGCATAACAGCCACTAAGGAAAAAAAATAGGGCAGCAAGGGAGTGGAGGCGTTGGTACTGTGGTGCTGAAATTTTTTTGCCTAATATGGGAAAAGCAAAAGGATAAGGAGAAATAATATTGACTCCATTCTCAAAATGTTTCTCAGCTAGGGCAATAATCCAAGGCAGCAGCGCCTATCCCTTTCCCTTTGAATTCACTTTAATTTTTTTTTGGTACTATTTACTTTTTGTAACAAATTTTAGCTTTTGATCATATTATATCTGTATATATAAAAAAAACTGGACAACATTGACTATCCAATTAGATCCCTTTATTTTGATTTTATTTGTTTTTCCATTTTTTTGTTAAGAGAGAGAAAAATTATAATTATTAGTAAATAAAAATAACAATAAATAACGAGCACCAAAATAGACATGCGTACACGACAAGAAGCGAACATGCGCGCGCAACGAGAATAAAATGCGTACACGATTAGAAATAACACACACGTACAATGCGACATTTTTTTGGTCTTTTAAAAAATGAGAAAAATACTTGTCAAAATACCCAATTAATCCACTGGACAAAATTTGGGTATAACACAATATATTTTGCAAGACTCCAATTTTCATCTTATTCCAACGCTTCTTATTTAATTTTGGCTCCGTTTCGCAAGTCCCATCCACTAGCAGATAACATATTTGGACTAGCGTATTTGACTAACGAATGATGAATAGATGTGTTTGGTAAGCACCAATGTTTAGCATTTTTTCAAACACTACTTCAAGTGGCGTTTTTTGAAACGCTACTTATAGCGTATGACGTCTCACTTTTTTTTGGTCATTATTACCCTCATTATTTTTGTTAAATTCCTCCTCTATCCTCTTTGAATTAAACTAAACAACTTTAAATCCTTACTTTTAATGTCATTTTATATCTATTAGTTAGTTTAGCCGCTAATTTTACCAAACACATGATTTGTTATTCGTCATTCGCTAGTTTATCCGCTATATGCTAATTTTTACCAAAAAGAGCCTTCCAAATCTTTCTTCCAATGGCTCTAGGGCATCAAATTTGTCTTTGAAGTAAAAGAAGATAGAAGTGTTTGTTTTGGAAAATCGGCATAATAAGTCACAAAAGCAGGTCCATATTAGATGCCTGACACTTTTTTTTTATTCAATTTAGACGAAATAGCAAATAATCGACCTACACAATTATATTCGGTGTACTGAAATTGTTAATCCCCCCCAATACCTTTAATAATAGAATCTTTATTATTACCAGATATTTTATTTTATTATTATTATTATATTTTATCATAGTTGTGATTACGAATTAGGACCCCTTTACGTTTCTTCTTGCATCCCTGTTCGCTGTTTTGCAAGTTGCTCGGCGGAACGAGGACGACGGTGCTGACTTAACCTCTCATACCAGACGTGCTTCTCTCTCTCTCTGATTGTCTTCTTCATATTCTTCACAGTCACCGGAACACCGCCGTTTTCTCTATGAGGTCCGTTTCCTTTTTCCCTCTTTTTTACATTTCAACTGCTTCAGTCTTAACGGAATCGTCGAAATTGTAATTTCAATTCTGTTACTCTCGTCAGTGGAGAGTGTTAAACTTCAACTTGAACTTCATCGACAGTCGACCCTGCCGCCAGGTCGATTGGTTTGGTAGAGTAATTTCCGGAGAGTAAATCTCTGTGTTCATTTGGTTAATAAGTCAAAGCCTCCAAGGTTTTCTCTCGATTCAGAGTTGTTTTCGTTTTGAAGGTTTCATATATAGCCTTTGTTGTTGAACCATGAAAAGTTGGTATCTCTGCATATCTTGAACTTGAACTACAAGAGATCCTTCTTTTGTCATTATATAGTATATATATTTTTAAAATATCTATTTCTTAAGGGATAAGAAATTTTACCCCATTAGCAGTTACTTCATGAAATTTCTCCCTTCAATTTTAATTTTGCACCATACGCAGCCTACCAATTGCCAGATAATTTTGTTTTTAACAAAAGAAGGCTTTAATCAAGGGTTAGTAACAGCAATTTGGTTTTGAAGGTATTTTTTTCCGTGATGGAAGGAAGATGATAAAACAAACAAGTGGCAACTTTATGTTCATTTTTTTGGTTCAATCAATCTGCCTAGAAAGTAGTCGTGAGCATATGTTTCTAAATTTGGGCAATGACATTCTTGAAACTGTACTCTTTGTATGATTTGATTGGAAATCACGGAAGACTAGTAAACATTTGGAATCTGAGCATGAAGATAGCAATATTATTAATATAATTGGTCATTGTTTTGAATATTGGTTTGTTCGTCTGCAGATAGTGTATATGTAATGTGATCCACTTTTGAAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00520.34	Ion_trans	110	434	6.80E-36
PF00027.32	cNMP_binding	528	618	1.30E-07

Gene family

Gene family	Subfamily
Transporter family	VIC

Gene Ontology

GO term	Description	Category
GO:0005249	voltage-gated potassium channel activity	Molecular Function
GO:0071805	potassium ion transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0030553	cGMP binding	Molecular Function
GO:0005516	calmodulin binding	Molecular Function

InterPro

InterPro term	Description
IPR014710	RmlC-like jelly roll fold
IPR005821	Ion transport domain
IPR018490	Cyclic nucleotide-binding domain superfamily
IPR000595	Cyclic nucleotide-binding domain

trEMBL

trEMBL term	Description
A0A2K3NXR8	_

SwissProt

SwissProt term	Description
CNGC5_ARATH	Probable cyclic nucleotide-gated ion channel 5

KEGG

KO	Description	Enzyme
K05391	cyclic nucleotide gated channel, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G57940	cyclic nucleotide gated channel 5
Medicago sativa L.	MsG0480018204.01.T01	_
Oryza sativa L.	LOC_Os04g55080.1	cyclic nucleotide-gated ion channel, putative, expressed
Cucumis sativus L.	Csa013873	_
Glycyrrhiza uralensis Fisch.	Glyur000063s00005887.2	_
Codonopsis lanceolata	Cl_chr08_27140T	_
Arachis hypogaea L.	AH01G23810.1	Probable cyclic nucleotide-gated ion channel 6 like

Expression pattern