| Gene ID | Annotation |
|---|---|
| Am01G031460.1 | dicer-like 4 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G031460.1 | mRNA | Chr01 | 183653521 | 183674806 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00636.29 | Ribonuclease_3 | 1032 | 1163 | 5.10E-46 |
| PF00636.29 | Ribonuclease_3 | 1239 | 1348 | 5.10E-46 |
| PF14622.9 | Ribonucleas_3_3 | 1219 | 1350 | 5.50E-26 |
| PF03368.17 | Dicer_dimer | 575 | 659 | 2.10E-24 |
| PF00271.34 | Helicase_C | 398 | 509 | 1.30E-19 |
| PF04851.18 | ResIII | 56 | 210 | 3.70E-14 |
| PF00270.32 | DEAD | 47 | 208 | 4.30E-14 |
| PF14709.10 | DND1_DSRM | 1530 | 1604 | 8.90E-11 |
| PF02170.25 | PAZ | 868 | 988 | 3.80E-08 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | DCL4 |
| GO term | Description | Category |
|---|---|---|
| GO:0016441 | post-transcriptional gene silencing | Biological Process |
| GO:0045087 | innate immune response | Biological Process |
| GO:0051607 | defense response to virus | Biological Process |
| GO:0006353 | DNA-templated transcription termination | Biological Process |
| GO:0015074 | DNA integration | Biological Process |
| InterPro term | Description |
|---|---|
| IPR036389 | Ribonuclease III, endonuclease domain superfamily |
| IPR000999 | Ribonuclease III domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR003100 | PAZ domain |
| IPR006935 | Helicase/UvrB, N-terminal |
| IPR001650 | Helicase, C-terminal |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR014720 | Double-stranded RNA-binding domain |
| IPR038248 | Dicer dimerisation domain superfamily |
| IPR005034 | Dicer dimerisation domain |
| trEMBL term | Description |
|---|---|
| A0A1S3EEX9 | _ |
| SwissProt term | Description |
|---|---|
| DCL4_ARATH | Dicer-like protein 4 |
| KO | Description | Enzyme |
|---|---|---|
| K11592 | endoribonuclease Dicer | [EC: 3.1.26.-] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT5G20320 | dicer-like 4 |
| Medicago sativa L. | MsG0880046903.01.T01 | _ |
| Oryza sativa L. | LOC_Os04g43050.4 | Dicer, putative, expressed |
| Cucumis sativus L. | Csa016353 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur001645s00024575.2 | _ |
| Codonopsis lanceolata | Cl_chr08_25890T | _ |
| Arachis hypogaea L. | AH01G24240.2 | Dicer-like protein 4 like |