| Gene ID | Annotation |
|---|---|
| Am01G031320.1 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G031320.1 | mRNA | Chr01 | 183140065 | 183146511 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00009.30 | GTP_EFTU | 139 | 398 | 2.30E-49 |
| PF16004.8 | EFTUD2 | 3 | 119 | 7.10E-36 |
| PF03764.21 | EFG_IV | 724 | 838 | 6.80E-24 |
| PF00679.27 | EFG_C | 841 | 929 | 9.60E-23 |
| PF03144.28 | GTP_EFTU_D2 | 507 | 581 | 7.00E-12 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0005829 | cytosol | Cellular Component |
| GO:0009536 | plastid | Cellular Component |
| GO:0006414 | translational elongation | Biological Process |
| GO:0005840 | ribosome | Cellular Component |
| GO:0003746 | translation elongation factor activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR000795 | Translational (tr)-type GTP-binding domain |
| IPR009000 | Translation protein, beta-barrel domain superfamily |
| IPR004161 | Translation elongation factor EFTu-like, domain 2 |
| IPR005517 | Translation elongation factor EFG/EF2, domain IV |
| IPR044121 | Snu114, GTP-binding domain |
| IPR005225 | Small GTP-binding protein domain |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR000640 | Elongation factor EFG, domain V-like |
| IPR035647 | EF-G domain III/V-like |
| IPR031950 | 116kDa U5 small nuclear ribonucleoprotein component, N-terminal |
| IPR035655 | 116kDa U5 small nuclear ribonucleoprotein component, C-terminal |
| trEMBL term | Description |
|---|---|
| A0A1S2YQN3 | _ |
| SwissProt term | Description |
|---|---|
| CLO_ARATH | 110 kDa U5 small nuclear ribonucleoprotein component CLO |
| KO | Description | Enzyme |
|---|---|---|
| K12852 | 116 kDa U5 small nuclear ribonucleoprotein component |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G06220 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| Medicago sativa L. | MsG0880046881.01.T01 | _ |
| Oryza sativa L. | LOC_Os06g40600.1 | elongation factor, putative, expressed |
| Cucumis sativus L. | Csa006651 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000127s00009174.1 | _ |
| Codonopsis lanceolata | Cl_chr08_27880T | _ |
| Arachis hypogaea L. | AH01G24430.1 | Uncharacterized protein like |