Gene detail

Detail information of Am01G031310.1 Annotation

Gene ID	Annotation
Am01G031310.1	DNA-binding protein phosphatase 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G031310.1	mRNA	Chr01	183137085	183139555	+

Sequences

CDS:

>Am01G031310.1
ATGTGTGTGCAGGACGGTGACCAAGTTGATCAACAAGATATGGAGAATGTTGATAATAGAAGAATTCCATGGCCTTTGCATTGTGATCTCTTGCATGCTCAGATGGACAACAAAGAAAAAGCTTCTTCTTTTGGAATTCCCACTGCTGCAAATTCATTTCCTCTGGAAAGCATTTGTGAGAATACAGAGATAGCAGAGAAAAAACAGAATCTGATAAATTTCGCGCCCACTCTTCGCTCTGGAGAGTGGTCTGATATTGGAGGTCGCCCTTATATGGAGGATACTCATATATGCATTGGAGACTTGGCAAAGAAATTTGGTTATGATGTTGTCTGCGATGAAGCTATTTCTTTTTATGGTGTCTTTGATGGACATGGAGGGAAAAGTGCTGCGCAATTTGTTCGTGATCATCTGCCGCGAGTGATTGTTGAGGATGCTGACTTTCCTCTGGAACTTGAGAAGGTGGTTACAAGGTCATTTTTGGAAACTGATGCAGAGTTAGCAAAAACATGTTCTATTGAGTCTTCCCTATCTTCTGGTACAACTGCACTCACTGCAATTATATTTGGAAGGTCTTTACTAGTGGCAAATGCGGGCGACTGTCGGGCTGTTTTGTCCCGAGCTGGAGGGGCTATAGAAATGTCCAAAGATCACAGGCCATTATGCATCAAGGAAAGGAAGCGGATCGAGTCATTAGGTGGATTTGTCGATGATGGTTACCTAAATGGACAGTTAGGCGTTACACGTGCTCTAGGTGACTGGCATCTTGAAGGAATGAAAGAAAAGAGTGGAAGAGTTGGACCATTAAGCGCTGAGCCAGAACTTAAATTAATGACACTAACCAAAGAAGATGAGTTTTTAATCATTGGAAGTGATGGAATATGGGATGTTTTTCGTAGTCAAAATGCAGTGGATTTTGCTAGGAGGAGACTTCAAGAACATAATGATGTGAAACAATGTTGCAAAGATATAATAGAAGAAGCAATAAAGAGAGGTGCAACAGATAATTTGACAGTTGTGATGGTATGTTTTCATTTGGATCCACCACCAGCTTTGGTTGTAGAAAGGCTTAGAGTTAGGAGAAGTATATCTGCTGAGGGACTTCAGAATCTTAAATACCTGTTAAAAGGATAG

Protein:

Promoter(3k):

>AM01G031310.1
CATGCTTGCCAACATAAAACTAAGCAAACATGGTTCTGATGTACTTCAAGATCCTTATCAATATAGGAGCATTGTAGGAGCTCTCCAATATGTAACTTTGACAAGGCCAGAGATTGCCTTCAGTGTAAACAGGCTATGTCAGTTTCTCTCTTGTCCTCTTGAGTCACATTGGCTGGCTGTCAAGAGGCTCCTCAGGTACCTCAGTGGTACTTCTTATCATGGTTTGCATCTTCAGGCATCTTCTCCAGATATTAAATACTCTGAGAGTGTATGTTGACAGTGACTGGGGAAGTGATATTGATGACCGAAGATCCACAACTGGCATATGTGTTTTTCTGGGTCCAAACCTTGTATCATGGCGTGCTAAGAAGCAGAGTCTCGTAGCTCGCTCAAGTGCAGAAAGTGAATACAGGGGTATGGCACTAGGTACTGCTGAATTACTTTGGATTCAATCACTATTGACTGAATTGCAGGTGCCACATCAGGTTCCAACTCTTCTCTGTGACAACTTATCTGCTGTTCTTTTGGCTCATAATCCCATCCTGCACTCACGGACCAAGCATGTAGAAATGGACCTCCATTTTGTTAGAGAAAAGGCTATAGCCAAAACTCTGCTTATCAGACATGTTCCAGCATCTGCACAAATTGCAGATATCTTAACAAAGCCTCTTGGCACTTCTGCTTTCACCACTCTCAGGAACAAACTCAAGGTTAATTCCCTCCTTGAGCTTAACGGGGGAATAATAGAGAATGAGACTTCTCAAGCCAATAAGAAGCCTTCAAGTCAACATTCACAGATGCAACCGGCTCAGCAAGTTAACAAGTAGCCTTTCACTTTGTAATTTGTTTAGAAAAGTCAGTTTGCTTATCTCTGTGTAACAAGCTTCTGTTAGAATAATCTTAGGGTTAGTTAGAAGAGATTGAATCTGTTGTAACAATAAAAACAGATTCAACTATCTTTCTTGTTTTGAGCATTTGTATATATACCACTCTCTGTATTCAATTGAATAATATAGAACCATTATTCAGTTTCTATCTCTTATAAATATCATTAGAAAAGATTTTTTTCCAATAAATAGAAAGTATTATTAATGAAAACCGATCTTTACAAAGAAAGGTGGTAGAGGATTCACCAAGACACCAAGAACAAACTATTTTTAGATAAGCAAGAGATATATTAAGGGAGTACAAGGGGTACTCCAGCCCTTAAAGGTACAAAAGACCTCGTTAAAACATCTCGAGGCCAAAACTCATTGGAAAAAGACCGGAGGGAGAAAAAGAGTACAACATCCAACAAAGAAAAACAAAATGTCCATTCAATTGCAACTGAGCCTATTATCCTTCACGCATTACGCGCTTGCACTATAACAGGAAATGCCACAATTCCTATGCTTCCACCCCAACTTCCTGCACCTGCAAGCTGGGGGCGCTATTTTACAGTAACAAGAGCCATATGGTTTTTTGCTATTTATTGGTCCTGCTAAGTGCCTTCCAATAGCTCCACATTCAATTTAACCGATCATCAAAGTTATGGGTAGACTTCCTACTCCTTTTTGAGATAAACTACCCGTAGATAAAAAATTTATGTGATTGACAGTGATGCTTAGATTCGCATATTATCTGGTTACTCGAATGCCAAATTGCCCAAACTGTTGCCATCCAAATAAGGTGTTTTGTTCTTTTCAGCTTCCTTCCTTTTAGACTCAAGAGAAAATGTTCTCCCAAACTCTCTTCGCGAATGAGCAGCAACAGAATAGATGGTTTACAATTTCGTCTGCTTTGAAAATGCTCTGGCAATACTACTCAACGCCTCGCGAGTAGGCAGCTAATTAATTAGCAATCTCCATTACAAAGCTGCCACTGGTGACGTCGTACCTCCTGGTTTTGGCACAAGCGAATATCACCCCATACGTTGGCCTAGCATCGTTACGTGCAAAAGAGTCGGACAACCGTACATAACATGATTTTATAGAGAACAAATTGTTGTCAATGGGAAAGCACGCATATTAATTGACCACCACACGTGTGCCACCGCCGTCCGAAAGGCCGGGCTTGGGCTTGGCTTATGAGGTGTAAATTTCTTTTTTGCGAAAATAATTAATTATTTTTGGTGCGTTGCTTGTCTAGATTCGTTGAACAGACCAAATACGACGAACTAACTGTTGCGTATCTGATAGAGCCGTTTGTGGCCGTTATTGACTTGCAGCGCAAGCACTCCGTTCTTATCTTGCACCTTGGAGCAGTGCCGCGAAACGTCTTAAAGAGAGCGACCTAGTCCGTGACTCATCCCGGTAATTTCTTCGGTACAATTTTCGAAAACTCAAAAACAACGGTTAATGGAAGGAAGCAGAGAGAAAAAAGAGAAAAGGGCATAGAATTTTGCTACAAATATCGCAGAAGATTTTTCACATGGTATTATACTATTATTATTATGTGTAGACCAAAAAATACTATTATTATTATTATTATTATTATTATGTGAGGGGCACAATAAAGGTTGAGAAAGAGAAAGAAAAAAATATAATAGCATAATACTATTAAAAAGAAAGAGTGGGATTGGAAGATGATAGGTAAGCAACTAAGCATAGAAAAGAACATTATTCAAGATTATTTTTGTCCAACATAATAATCTCACCAAAAAAAGAATCACCTAATAAATCCAACCAACGATTTTGGACCACGCTTTTTCATAGAAAAATCTGGAACTTAACGGCTCTACTTCTCTTTCATTTCCATTAATAATTTTACTATAAACAGAGAGAGAGAAGAACTCCATCATTTTCCAAACATATTCTAAGAATCTTCTCTTTCTCTTTTTTATTATAAGCTACAAAATTCATATATGTGGAGTTGTTGTGTGTTACTTTAATTATAAGCTACAAAAATATTCTTTTATTATTATTATTATTACTTTCTGATTTCCATACCTGCAAATGGTAGTGAATCTCTGAGCTGAAAACGTACCACTTGGCCACACCACTAGTATAGTGTTTTGTCACC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00481.24	PP2C	91	336	3.10E-69

Gene family

Gene family	Subfamily
Transcription Factors Family	Others

Gene Ontology

GO term	Description	Category
GO:0006412	translation	Biological Process
GO:0005840	ribosome	Cellular Component
GO:0043169	cation binding	Molecular Function
GO:0003677	DNA binding	Molecular Function
GO:0003735	structural constituent of ribosome	Molecular Function

InterPro

InterPro term	Description
IPR015655	Protein phosphatase 2C family
IPR036457	PPM-type phosphatase-like domain superfamily
IPR001932	PPM-type phosphatase-like domain
IPR000222	PPM-type phosphatase, divalent cation binding

trEMBL

trEMBL term	Description
A0A9D4X9H5	_

SwissProt

SwissProt term	Description
P2C27_ORYSJ	Probable protein phosphatase 2C 27

KEGG

KO	Description	Enzyme
K14803	protein phosphatase PTC2/3	[EC: 3.1.3.16]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G25620	DNA-binding protein phosphatase 1
Medicago sativa L.	MsG0880046880.01.T01	_
Oryza sativa L.	LOC_Os02g55560.1	protein phosphatase 2C, putative, expressed
Cucumis sativus L.	Csa006822	_
Glycyrrhiza uralensis Fisch.	Glyur000127s00009172.1	_
Codonopsis lanceolata	Cl_chr08_27900T	_
Arachis hypogaea L.	AH11G33550.2	Probable protein phosphatase 2C 27 like

Expression pattern