Gene detail

Detail information of Am01G030880.1 Annotation

Gene ID	Annotation
Am01G030880.1	Integrase-type DNA-binding superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G030880.1	mRNA	Chr01	181386546	181387433	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G030880.1
ATGTCACAGATGCAAAATGAAATTGACGCTTTAAAAGCACAAGTTGCTGAAGTTGATAGTCTAAAGGCTCAAGCTGCTGAAGTTGATGCTCTAAAGGAATGCTGAATTGCCTCTATTGAAGGAACAACTTGCTTATGTTATGCAAATTCTTAAGCAAAATCAGGTGATCACCGTATGAATTACCTATATTGCTTGTTATACGTAGCATATTCAAATCTGATGCTGAATTACCTGTTATACTATGCATTCTCAAACTCCTATGAATTACCTTTGACCACAAGTCAAAATATTGTTTTCATTATGAAATTACCTTTGACCACAAATCAAAACTCCTATGAATTACCTTTGACCACAAATCTGTGACTCAAGTATATTCATGCGTATGAAAATACCCTCATCAATATAGAAATAATATTAAGCTCTTGGTAGGTGGTTGCATATGTTCATTTGGCATGCTTTATGGAATGTAGTATTGGCACAAGAACTTGTTGAACAATTTAGTATGATTAGTATTAGTGTCCTTTTTTGTGAGCTCAATATTGTAACTTAGGGACATCACCTTTTATCATTGAGTATCTTGAACATTCATTGTATGTGTATGGGCATTTTGTACATAAATCTGTTTAGTAACAATATCATTTAGTTCCCAGCTTCATAACCGTAGTCTTTCTAGTTTCCAGTACACATTATTTCTGTTTGCTGTAATTTGAATGTTATAACAAATGGATTCTTAAACTGCTATATTAGTTCTTCTTTTTCTTTTAACCGTAACAACGTTGTTTATGAAAAATTATGTGACTTGTTTTGGTCCCACCGTACACATACTTGATAGCTTCAATATAGGCATGAGCATACCAAGTCCTACTGTACAGGATAGCTTGGTCCCACCAATTTGTTGTGGCAAAGGAAACTTGCTATCCAATATACATGGTGCTGTACAGGATAATAACCCATCCCACGGAAGATTCTGTTAATACCAACACGTGGAACAATATTCAATGCAATGGGGCTGTTGTTAGCTTTGTGTTAGCAAACAAGTCCTTCTGAATTATTTAGCTTTGTGTTAGCAATCCTACTTTAGATTAACAAGGATTTTATTGCTGAATTACCTATATTGCTGAATTCCAATATCAGTTTTACCTCTGGTGCTGAATTACCTATATTGTTTGGCTTGTTTTGTAGTTCACGTTGTTGAGAATTTGCTATATGCGACATTGTTTAGATATTGGTTCTAATTTTATTTATGACTTATTTTTTCAGCCGGATAATTTGGAAACACAACATGGTTTGAGACGCTCTTCTGAATCTAGTAACATAGGACAACATGAAGCAGCACCATCACGAAGGATATCTAGATAGATGATTTTATTTTATTGTTATGAACAACACAAACTTGATGCTCCTTGGTTGTATTTTGACTTTATTAACTAAGTTGGTTGTATTTTGACTTTATTAACTAAGTTGGTTGTATTTTGACTTCATTAACTAGTTCTAGTTTGATGTTATGAACTTAGTTTAATTTATAAACTTTAGAACTTTTGTATGTGTTTTTAGCATAAATTTAGTTTCTTTTAATATTTGTATTACCAAATAATTAATAAGTACATTTATAAAATTCGTAATAGAAAGATAGATATACTGAAACACAAAAAATCCTATTTTTTTTTTTAAAAAATGATCTATTGGCGGCGGTTCCAAACCGTCTCCATATTTAAATAAAAAATTAATTTTAATTTATTTGCGGCGGTTTCAAACCGCCGCTAACAGTAACGTGGAAAAGCTGTTAACATATTGGCGGCAGGGTACAACCGCCGCTAAATGTAATGTGGATAAGCTCCGTCAACAACACCTCCCGACGCTGAAAGCCACGGCGCTTTCGGAACCGCCGCGAGCCTTAATTAACGGCGGTTCAAACCGCCGCCGCTATCCTTTTTAACCGCCGCCGATGACAATTTTTTGCGTAGTGCAATGTTTTTAAAACCGGACCGGAGATCTCCGGTTCATGGTTCAATCGGTTCAACCATGGTTGAACCGGATAAGTAATTTATTAAATAAAAAATAAAAAATATTAAATTTTGGAGAAAAAAGTAAATTTAAAAATAAAAAATTGCATTTCGGGCGGTTCAACCCGGTTCGGTTCCCGGTTCTTTCCCGGTTCAAAGCGGTTCTATCCGGTTCTTCCCCGGTTCTGGGCGGTTCTTTGGCCTGCGGTTCAAATGGGGTTGAACCAACCGGCCAGGGGTCCGGTTCCCGGTTCAACCAACCGGTTGAACCGGCCGGTTCGGTCCGGTTTTTAAAACCTTGGCGTAGTGATGAAAAATATTTTGCGTACATGTACATATTTAACTTTTATTTATAAATATGTGTTTTTTAAACTTTTTATTTTAGATAATTAAATAGATAGAAGCGAGTAGTGATGAAAAATATTTGGCAGCATAGTGAGGAAAAATATTTAATTTTAGTGATAATAATAAAGTGAAAAGGATTACATACACGATGGAGTTGAGGTGTCAGGCAAGTGGGAAACCAAGGATATTTGTTTGACGAAATTAGTATAAAGCAAATTACTCATTCCCTTTCCCATTTATAGCTGGAGGCGGTATTTATTTTATTTGTAGTGATGACTAATAAGGGAAAACAGGCGAGTAAAACATAGTATACTATACTAGGAAATAGGAATCTAGATGGATAAGTTCTAAAAAAACCCATCCTTAATTTGTCGTTACTTACAAAAAAGCAACAAGCGAGTAGTGCTAAATAGAGAAAGAAAGAAAGACATGGTCTTCCTTTATTCTGCCCCACTTTTTATTTTTTTTGAAGATTATTCTGCCCCGCTTTACTACAACCACAACTTGTCTTTGTAAGTTACAAAGCGTGTGACCAACAAAATGTATATAAACTCCGTACACTCACACACTCACATTCAGACTATATAACTCACACTTCTGCACTGCACTCATCTTCACAAACAAGTGAACAACTCTCTCTCAAATCGAATAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00847.23	AP2	61	112	2.40E-13

Gene family

Gene family	Subfamily
Transcription Factors Family	AP2

Gene Ontology

GO term	Description	Category
GO:0003700	DNA-binding transcription factor activity	Molecular Function
GO:0005634	nucleus	Cellular Component
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0006952	defense response	Biological Process

InterPro

InterPro term	Description
IPR016177	DNA-binding domain superfamily
IPR045277	Dehydration-responsive element-binding protein 1A-I
IPR036955	AP2/ERF domain superfamily
IPR001471	AP2/ERF domain

trEMBL

trEMBL term	Description
A0A2K3PRJ4	_

SwissProt

SwissProt term	Description
DRE1E_ARATH	Dehydration-responsive element-binding protein 1E

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G63030	Integrase-type DNA-binding superfamily protein
Medicago sativa L.	MsG0580024424.01.T01	_
Oryza sativa L.	LOC_Os04g48350.1	dehydration-responsive element-binding protein, putative, expressed
Cucumis sativus L.	Csa012870	_
Glycyrrhiza uralensis Fisch.	Glyur000195s00012851.1	_
Codonopsis lanceolata	Cl_chr02_39910T	_
Arachis hypogaea L.	AH15G04450.1	Dehydration-responsive element-binding protein 1E like

Expression pattern