Detail information of Am01G029770.1 Annotation
Gene IDAnnotation
Am01G029770.1 histone H2A 8
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G029770.1mRNAChr01177573582177574810-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF00125.27Histone71023.60E-19
PF16211.8Histone_H2A_C1041351.60E-10
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0000786nucleosomeCellular Component
GO:0046982protein heterodimerization activityMolecular Function
GO:0030527structural constituent of chromatinMolecular Function
GO:0005634nucleusCellular Component
GO:0003677DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR009072Histone-fold
IPR007125Histone H2A/H2B/H3
IPR032454Histone H2A, C-terminal domain
IPR032458Histone H2A conserved site
IPR002119Histone H2A

trEMBL
trEMBL termDescription
A0A8B8JEU5 _

SwissProt
SwissProt termDescription
H2AV3_ORYSJProbable histone H2A variant 3

KEGG
KODescriptionEnzyme
K11251histone H2A

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT2G38810 histone H2A 8
Medicago sativa L.MsG0180000614.01.T01 _
Oryza sativa L.LOC_Os03g53190.2Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
Cucumis sativus L.Csa024471 _
Glycyrrhiza uralensis Fisch.Glyur000220s00014771.1 _
Codonopsis lanceolataCl_chr02_05050T _
Arachis hypogaea L.AH16G47030.1Probable histone H2A variant 3 like

Expression pattern