| Gene ID | Annotation |
|---|---|
| Am01G029530.1 | histone deacetylase 15 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G029530.1 | mRNA | Chr01 | 176910676 | 176920284 | - |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF00850.22 | Hist_deacetyl | 170 | 458 | 4.20E-89 |
| Gene family | Subfamily |
|---|---|
| Epigenetic Regulators | HDA15 |
| GO term | Description | Category |
|---|---|---|
| GO:0046872 | metal ion binding | Molecular Function |
| GO:0005737 | cytoplasm | Cellular Component |
| GO:0005730 | nucleolus | Cellular Component |
| GO:0009640 | photomorphogenesis | Biological Process |
| GO:0009294 | DNA-mediated transformation | Biological Process |
| InterPro term | Description |
|---|---|
| IPR001876 | Zinc finger, RanBP2-type |
| IPR023696 | Ureohydrolase domain superfamily |
| IPR000286 | Histone deacetylase family |
| IPR037138 | Histone deacetylase domain superfamily |
| IPR023801 | Histone deacetylase domain |
| IPR017320 | Histone deacetylase class II, eukaryotic-type |
| trEMBL term | Description |
|---|---|
| A0A1S2YR24 | _ |
| SwissProt term | Description |
|---|---|
| HDA15_ARATH | Histone deacetylase 15 |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT3G18520 | histone deacetylase 15 |
| Medicago sativa L. | MsG0880046531.01.T01 | _ |
| Oryza sativa L. | LOC_Os07g06980.1 | histone deacetylase, putative, expressed |
| Cucumis sativus L. | Csa006516 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000523s00021969.1 | _ |
| Codonopsis lanceolata | Cl_chr02_27820T | _ |
| Arachis hypogaea L. | AH01G32240.2 | Histone deacetylase 15 like |