| Gene ID | Annotation |
|---|---|
| Am01G029190.1 | tRNA synthetase beta subunit family protein |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G029190.1 | mRNA | Chr01 | 175958366 | 175968374 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF17759.4 | tRNA_synthFbeta | 402 | 597 | 1.60E-52 |
| PF18262.4 | PhetRS_B1 | 1 | 90 | 9.10E-33 |
| PF03483.20 | B3_4 | 120 | 280 | 1.00E-24 |
| PF03484.18 | B5 | 309 | 377 | 4.00E-22 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0006432 | phenylalanyl-tRNA aminoacylation | Biological Process |
| GO:0009328 | phenylalanine-tRNA ligase complex | Cellular Component |
| GO:0000287 | magnesium ion binding | Molecular Function |
| GO:0003723 | RNA binding | Molecular Function |
| GO:0005524 | ATP binding | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR005147 | tRNA synthetase, B5-domain |
| IPR009061 | Putative DNA-binding domain superfamily |
| IPR020825 | Phenylalanyl-tRNA synthetase-like, B3/B4 |
| IPR004531 | Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archaeal/eukaryotic type |
| IPR041616 | Phenylalanyl tRNA synthetase beta chain, core domain |
| IPR045060 | Phenylalanine-tRNA ligase, class IIc, beta subunit |
| IPR040659 | Phenylalanine--tRNA ligase beta subunit, B1 domain |
| IPR045864 | Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) |
| IPR005146 | B3/B4 tRNA-binding domain |
| trEMBL term | Description |
|---|---|
| A0A9D4XAD3 | _ |
| SwissProt term | Description |
|---|---|
| SYFB_ARATH | Phenylalanine--tRNA ligase beta subunit, cytoplasmic |
| KO | Description | Enzyme |
|---|---|---|
| K01890 | phenylalanyl-tRNA synthetase beta chain | [EC: 6.1.1.20] |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G72550 | tRNA synthetase beta subunit family protein |
| Medicago sativa L. | MsG0480022897.01.T01 | _ |
| Oryza sativa L. | LOC_Os05g48510.1 | phenylalanyl-tRNA synthetase beta chain, putative, expressed |
| Cucumis sativus L. | Csa005129 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000084s00009508.1 | _ |
| Codonopsis lanceolata | Cl_chr02_22560T | _ |
| Arachis hypogaea L. | AH11G25300.1 | Phenylalanine--tRNA ligase beta subunit, cytoplasmic like |