Gene detail

Detail information of Am01G028970.1 Annotation

Gene ID	Annotation
Am01G028970.1	AGAMOUS-like 8

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G028970.1	mRNA	Chr01	175207600	175216360	+

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G028970.1
GATACATATTATAATAATGTTGATGACATTGACCGGCAGGCACCCCAGTAGCTTTAGATTATTTTATTTTTTTGTATGGATATTTTATTAATTGTATGGATATTTTTTTGGTGATAATATTTTACTGCTTTTCCCAATTTTTATTTTTTAAATTAAAAATTAATTAGTTATTAGATTTTATTTTTTTATCAATAATTAAAAAAATTAATAAAATAATATATTTTTTAATTAATACGATTTTTTTTAAAAAATAATATTTATATTTTAAAAATAATAATTTTTTTTTTAAAAAAAAGGGTACTTTGCGGCGGAATTTTAAATAAAACGTTTTTTTAAAAAAATTATATTTATTTATTTTTAAATAAAACGGGTACTTTGCGGCGGATAACGGGTACTTTGCGGCGGATATTGGGCACTTTCCGACGGATATTTTGCGGTAAAAATTTGTCCCTTTTCTGGCGGATTATCCGCCGCAAAGTTCCAGCGGAATTTGCAGCGCCACTAAATCCGCCGCAAAGCGTTTGCTTCGAGCTGGCTACCGGCGGCAAAATTTCGCCACAAAGTCCAAATATCCGCCGCAAATTTGGCTTTTCCGGCGGATTTTGCCCGCCGCAAAGTCCAATTTTTCTTGTAGTGTTCCATCATCATTATTTGGGAGCGAACATGAAGGTATTGTTCGTTTAATCCCTCGATAAACTTCAAAACTTTGTCTTGCTATATGGGGCATTATGCCACCCCTCTAGGCATATGCATTTTTTAACTCATGTGGATGATTTTAGTAGATTTACTTGAATTATATATATTTACGACTCTTAAGAGTGAAACCAAACAACATATGGCTAAAGTGCTCCCGGGGTCCCTTATCTTTATTTAAAGTAACGATTTGGTCCTTTATCTTTTTTTTGTCCCAAATCAATCCTTTATGTTTTAAATTTTTGACACATAAATCCTTTTCTGTCCCAAATCAGTCCTTTATGTTTCAAATTTTTAACACATAAATCCTTTCTTTTGACACATAAATCAACACTGTTAATGGAAAAGGATTTATGTGTCAAAAATTTGAAAGATAATGGACTTATTTGGGACAAAAAAAATATAAAGGACTAATTCGTTACTTTAAATAAAAATAAGGGACCCCGGGAGCAGTTTAGCCACAACATATTATAAACTTAATCACCTTAATTGAAACTTAATTTAACACTAAACTTAAATTCTTAAGAAGTGCGCAACGGATTTTTATGTCCAAAAATGTATTATTCACCAAATATCTTGTGTTGTCCCCTCGTCAAAATAGAATTGTTGTAAGGAATCACTTTCTTTTCAAGCTAAGTTGCCTAATTTTGGAAAATTTCTATTCAACATGTTCATTTTATAAATAGACTTCCTACCCCTCTTTTAGAGAACCAAAATCCCTACATTTTTTTTGTATAAACAACCTATCATTTTGTCTCAATTGAGATTTTTTGGCCTATATATGCTTCTACCCTACACAATCACATGACAAATTTTGAGGGTTCATGCTCACAAACATCTTTTTCTTGGACAAAATAATAACATTTTTTACTAATAAAGAAGTAAATAACTAAGAGCATAGAGATTGGGGGTGAAGGTTCATCATTCCTTAAGAGAGACAAATTTCTCTATTGATTTTCTTGCAAAACTAGGAGTCAAATGATTCTTTGCTTGAGTTTGTGGAGGTTCCACCCTTAGGTTTGCAACACGGTCTTATAAGTGATGCTTTAGGAACTTTGTGAGGCATTTTTTTATAAGCAAAATATTATATAAAAGAGGTATAAGGGGGTACGCCAACCCTTACATATATAAGGAGACTCATTAAAACCTCCTTGGGCCAAAACCCATGGGAAAATGTCCCAAGAAGGAAAAAGAGTATCCTAGGAAAAATTAGGCAAAAAGGCAATTACACCGAATTCAGACACACAAAAGGATTTCCCCACCAATCAGAAAACTTAAGAGTGGAATTGCGACCTTCTATGCTTATGAACCAACTACATGTTATAGACTTAACATGGTTAACAACTGCTTGAGGATTAAATACTTGTCCTCTGAAGAGATTATGGTTCCGATGAAATCAGATACACCAAGTGACAACCAACCAGAGTAAGTACTTCAATCTACAAGTTTTCTTGGATTCCAACTGCAAATCATGAGCTTGGAAATGCTCGACACCTACCAGAGTATTAAAAACCGTCATGCCCAACCAATTCTGAATAACAAGCCAAACTAATCTGAAACACCTGCACACAAAAAATAAATGGAAAATAGACTCATCTTGCTCAAAAGAAAATGGGAAGCACGACCCATGAGGATCATTGATAATGCCCTTAGCAATAAGATTATCGCGAGTTGGAAGCCTCCCTAACAATAATCTCCACCCAAAAACCTTCACCTTAGTGGGGATAGATAGATGTCACATATCAACAAAAACAATCTGGATTATCCTGCTGCCTCAAATTTAGCAAAAGAAAAATTAAATTAACTACTTTAATTACATTAGTTAAATGCACACTTAAGCAGTTATGTATAATTAGCATTTAAAGTTTAATATTATAATCACACGGGCATTAATATATTAAAGAATTATATATGACATATGATAAGAAAAGGTCAGAATGTGTACGAGAAAGAGCGGGGCCCAAAACAATAATGACAGAGTATGTGACCAATGGTGAGACGACAACGTTATTGACGAAACCACTGAGGTATTGCCAAAACCACCATTAAGATCCTATCAGTGGTTTCTCTAACTTTGGCCTTTTCCTTTCTTTTTCTTCCCGAATATGTTAAAATACTGACTATATTTTCCTTTTTTATAAGCGAAGAAAAGAGTTGCTGTCTGCAGTGTGCTGTTCTTCTCTTTCCTTCTCAATATAATTTCCCTTCTTAGCTCCACATCTTCGAATTAAGATTGATAGTGTATATCTCTAATTGATATACGTTGGTGATTTAATTATCATAATATAAAATTAGTGTATAATTAAT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01486.20	K-box	87	172	1.40E-29
PF00319.21	SRF-TF	10	57	4.60E-26

Gene family

Gene family	Subfamily
Transcription Factors Family	Others
Epigenetic Regulators	FLCP33

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0046983	protein dimerization activity	Molecular Function
GO:0000987	cis-regulatory region sequence-specific DNA binding	Molecular Function
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0010582	floral meristem determinacy	Biological Process

InterPro

InterPro term	Description
IPR036879	Transcription factor, MADS-box superfamily
IPR002100	Transcription factor, MADS-box
IPR002487	Transcription factor, K-box
IPR033896	MADS MEF2-like

trEMBL

trEMBL term	Description
I1U3J9	_

SwissProt

SwissProt term	Description
AP1_VITVI	Agamous-like MADS-box protein AP1

KEGG

KO	Description	Enzyme
K09264	MADS-box transcription factor, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G60910	AGAMOUS-like 8
Medicago sativa L.	MsG0880045135.01.T01	_
Oryza sativa L.	LOC_Os07g41370.1	OsMADS18 - MADS-box family gene with MIKCc type-box, expressed
Cucumis sativus L.	Csa004592	_
Glycyrrhiza uralensis Fisch.	Glyur000050s00005679.1	_
Codonopsis lanceolata	Cl_chr02_57170T	_
Arachis hypogaea L.	AH01G33000.1	Agamous-like MADS-box protein AGL8 like

Expression pattern