Gene detail

Detail information of Am01G028510.1 Annotation

Gene ID	Annotation
Am01G028510.1	Protein kinase superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G028510.1	mRNA	Chr01	174077283	174081231	+

Sequences

CDS:

>Am01G028510.1
ATGGGGTGCGTCTTTGTGAAGCAGGGTGTGTCAGTGACGCCGGCCGTCGACAACTCAATTGACTCAGACAGGAACAGGAAGACAAAGAAGACTACTACTGACTCAGTAAGAACGAGTCAAAGCGAGTTGGGTGAGTCAGGGAGGGCGAGTTCCAATAACAGTTTCAGGTTAGGGAACCTCAACAAATATATAGAGGGAGAACAAGCCGCAGCTGGATGGCCTACTTGGCTCACCGCTGTGGCTTCTGAAGCCATTCATGGTTGGGTGCCTCTCCCTTCTGATGCCTATGAGAAACTTGAAAAGATTGGGCAGGGTACTTATAGTAGTGTTTTTAGAGCGAAGGAGTTAGAGACAGGGAAGATAGTGGCACTGAAGAAGGTGAGATTTGATAATTTTGAGGCAGAAAGTGTGAGGTTTATGGCACGAGAAATAATGATACTTAGAAGGCTTCATCATCCCAACATCATTAAATTGGATGGCTTGATTACTTCCAGATTGTCTTCTACCATTTACCTTGTATTTGAGTACATGGAGCATGATGTTACAGGACTCTTGTCTAGACCAGATATTAACTTTACCGAATCTCAGATCAAATGCTATATGAAACAATTGTTGTCAGGTCTTGAGCACTGTCATTCGCGGGGTGTAATGCACCGTGACATCAAAGGATCAAATCTTCTCGTCAATAATGAAGGGATATTGAAGGTGGCGGATTTTGGATTGGCAAACTTCTCCTCCTGTTCCCAGCCACTTACTAGTCGCGTGGTCACGTTATGGTATCGTCCTCCGGAACTTCTGCTCGGTTCAACAGGTTATGGTCCGTCTGTGGATCTCTGGAGTGTTGGTTGTGTATTTGGAGAGCTTCTAGTTGGGAAGCCTATACTTAAGGGGAGAACAGAGGTTGAACAATTGCACAAAATCTTCAAGCTTTGTGGCTCTCCACCTGAAGAATACTGGAAAAAGAGCAGACTTCCTCATGCAACTTTGTTCAAGCCACAGCAACCATATCATAGTTGTCTCCAAGACACATTTAAAATTTTTCCGGAAACCAGTGTAAATCTACTGCAAACCCTTCTTTCTGTTGAACCAAATAAACGTGGCACTGCCTCCTCTGCTCTCTCATTAGAGTATTTCAAAACAATACCTTATGCATGTGACCCATCAAGCTTACCTGTGTATCCACCTAGCAAGGAGATTGATGCAAAACAAGAGGAGGAATCTAAAAGGAAAAAGATCAGCGGACGAGTCTGCGGCCCTGAAACAAGAAGGTCATCAAGAAAGCCTGTAGGGCTGAGGAAATTAGCCCCAGCAGAGGATTCGACGACTCGAATTCAAAGTTCCCTAAAGATGGATGACAAAACTCTCCACATCCTTAAAGAAGAGAACACTAACTTAGGTGAGGATGCACCAAAGTCAATCAGTGGTAAACCAGAAGAAGATGCTTCCCATATGAAGAATGGATCTCAAGTTGATTTTCCTTTCCCAGGACAATTACAAGTTTCGAGATCAAGTGGATTTGCATGGGCAAAAAGGCGTAAAGACGACACTTCAGTTAGATCCCACAGTCGATCTATTTCTAAAGGACATATATTCAATGAATTGGAAGCTTGTACACATAATTTAAGGAATAATTCTCACAGCAGAAACTATGAAAATAAGGAAATTCTTGGGGAACGCACCAGCTCCAGGGGCCAAGACCTACTTGAAATTTCTAAGCTTGTAATGCAAAATCAATGGAGTAGGTTTGATCGCCCAGATTCCTTTGATACTTCTGATGAGTACCATTCACAAGAACTGTCTATGGTGCTTTACCACAGAGAAGGTTCACTGTCCAAGAGAAGCAACCTGGTAAGTTTGCCAGATTCATTGATATGGTATTAA

Protein:

Promoter(3k):

>AM01G028510.1
TTGGAAAAAGTCTAAAAAAAGTCGGTACTCCCGTTGGCAGTCCCATTGCCGCTCTTGTTGTCGCTCTCGTTGCCACTGTCGTCGGCACTCATGTTGGAAGTCCTGTTGGAAAAAAAATGATGACTTTCTAAATCATATTTTAAATCACATTACTAATAAACAGATTTTAAAATATTAATGAAATCATATTTTTAAAATTATGAAAAAAGACTTTTTTTAAAAAAAAAGTTTTTTTTTTAAAGTTTTGAAAAAAAATAAAAAAAACAATTTTAAAAAAAAACGATTTAAAAAAAACAGTTAAAAAAATTAAAAAAACACTTTTTTTAAAGACAATTGCTTTTTTTTATAAAAAAAAAAAAAAATCTGCTGATAGCGCGTCTGTTTTAATTTTTTTTAAGATGCTAAAAAAGCTGTTTTATTTGTCTTTTAGTGGCGAAATGACCATTTTATCCATAATTTTTGACAAATGGCAAAATTCTAAGATGTCTAAAAATGTAAAAGTCCTAACATTGGTTTTTATTATAGTAGTTATAGTAGAGTTGATTGATGATTTTTTTTTTAAATGCTGAAAAAGTTTTTTTTTTTCTTTTAGTGGCGAAATGACCATTTTACGCCTAGTTTTTGACAAATAACTGGCATTGATTTTTATTATAGTAGAGTTGAGAGTTGATTGATTAACTCACTTGTCTTAGTTTAAAAATCAATTTTATTATTTTAATCTTGTTTAAGTACATTCTTCTGTGTTTCTTGTCATTTGTCTCAAGCTGAAATTAAAAAACATAATGCAGAAGTCCCACTATGTCACTAACAGCTTTTGTCATCATTATAAAGCCAACTTTGTCAAAATGTCTGAAGTATTATGCATGAACGAAAATTATTTGTTTTCTTTGATCAACATCAAAAAAAGTTGTGGACTTTTTGCTGCTCTGTTTTGCACCGTTGTAAAAGGGATATAAACTTTTACCTGTTTTAACCTTGCAATATATCAGTTTCCATTGTCCCTCTCTACCTTTTTTTAAGTGTAAATTTACAAAATGCTTTATGTATCCACCTTTATTTACATTGATTTACCTTTCATATTTTGAACTATAGATATTTTTTGTTTGTTGTCACTTTTGTATTGCTTGTCTGTATGATTGCTTCTGTGTTCTCCTCATTCGATCTTGAATAGATCACGGGTAGCACGAGACAGTAATTATGGCACATTATAGCCATCCATCCCTTTTTCCTGAAGGAAGAAGCTTACTATTATCAGTGATGACACAGACACACCACATGTAAAACAGATAAAAAGAAGCCCATAACTTGATAACAAAGGTAACAATAGTTAGTTACTATGCCATTCTCTCATTAAGTTTATTCAAAATTAAATTTATATCAGCAGTGTCACCAAGGTAGAAGCTAATATTTCAATCAAGATAGCTAGCTTTAGAAAGCGTGATTTAGATGAGTAACAATATAAGGAAAATTGATTAACTTATTCTACTTCCTATTTTCCTAGCTGTTACTCTAGGATTCCACTTCGAGAGTGGGTGTAAGTGAAAGAGGAGGTTTTGATTGAGCCAACTTCCTTTTTCTAATGAGAAAAAGAAAAAGATAGTGGGGGCAACACTTGAAACTTTTGCCTCACTCTTTTTCTTAGGTTACTGGAAAGAAACATCATACTGAAAATAAGGTGGACATATTAATAAGGTAGGCATGGTTTAGGCATTAAATCATGCCCAACCCAATCAATCATTGTACTAGTAAATTCCCGAACGCATTAGCAAAAAGAATGATCATTATTAAGTATGTTTTCTTCTAGTGTTTATTAATATTAATAATTGAATTGATCCCAAGTGTTGGCCTTCTTTGTCTTATCTTGTGCATAGCATATATATAAAACTAAATGTTGAAAGTTAGCAAATTGGCATGTGAAAGCTATATAGTGAAATTCAAAGGGAAATGGTCCCAAAGTCTGAATTCATTCATCCCTACCCTAATGAACACGCACTGTACCCACTCATAAATATCCAACATTCCAAAGCGTTATCTCTAAGGAATTCAGAACTGTGGTCAATATCAGCACAGGACAGCAAGGAGATAATAGATAGATAGACTCTTGTAATTTCATTTCCAATTTGTTCAAACTCAAAGCATGAGGAAAAATATGTAGCATATAATAGGTGCCGGTCTTAAGAAAGTAAGAATGAAAATGTCAATAATTAAAATCTCCGTTTGATTGATTGCCGCGTGCCACACACGTAATTGAAGTTGTGCATGAAGTATGAACGAACCGAAGAAAAGAGGTTGACATGTTAAAATAAAAGAAAGTTGAATTTGAAAGCAAATGGAGATTAAAGATTAGCGACCCTATACCATCGACCAGTGTGGACAGCAAGAAATACTGATTATTAGTAATAATTGATGATTATTTCAGAGTTTGGTGGTTACGATACCTTTTAGGTAAAATGAGTTCAATATTTATTTTTTTGACAAAATATTTAAATAAAAAAAATGAGGTGTCATTGAATGATTGAATGTTGGGTATCATACCTAAAGGTACGCTAGTCTTCACCATATATTATATATAATACTACAACACACGCGCTGTGCTCTTTTCGGAACCCAATCAATCCCATGCAAAATTTCCTTGCTTTCTAGTTCTAGTGTAGTACACCATTCATTGTCCATTGATTATTATTCACTTCAACAAAGCCCAACCAACGTATTACTACATTGCAAACAAAACCAGTTAGTATTTAGCGTCACTTTAATACTGGTAGTTGTCATTGAAAAGGCAAATACACAGAGGCAATAGAAGAACGAGTTTTTATTTTTCCGTTGATTTCGGCGCTCTGTTTTTAAGATCCCAACATCCACCATCTTTCCCCGCAATTGCCGCAAAAACAAAAAGTGAACCATTTCTCCTCCTTCACTTCTTAAACAGTTATTCTCATCCTCTGCAGTTCAAAGGAACCCGACCAAGTTGAAGGCGTTGATGAGGTGTCATTCATATTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	96	378	6.60E-69
PF07714.20	PK_Tyr_Ser-Thr	98	307	4.60E-29

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.2:CMGC_CDK-CRK7-CDK9

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0097472	cyclin-dependent protein kinase activity	Molecular Function
GO:0046983	protein dimerization activity	Molecular Function
GO:0051726	regulation of cell cycle	Biological Process

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain

trEMBL

trEMBL term	Description
A0A1S2YRD3	_

SwissProt

SwissProt term	Description
IBS1_ARATH	Protein IMPAIRED IN BABA-INDUCED STERILITY 1

KEGG

KO	Description	Enzyme
K08819	cyclin-dependent kinase 12/13	[EC: 2.7.11.22 2.7.11.23]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G18670	Protein kinase superfamily protein
Medicago sativa L.	MsG0880046496.01.T01	_
Oryza sativa L.	LOC_Os07g40550.2	IBS1, putative, expressed
Cucumis sativus L.	Csa004366	_
Glycyrrhiza uralensis Fisch.	Glyur000050s00005740.1	_
Codonopsis lanceolata	Cl_chr02_25400T	_
Arachis hypogaea L.	AH11G23800.1	Probable serine/threonine-protein kinase At1g09600 like

Expression pattern