Gene detail

Detail information of Am01G028240.1 Annotation

Gene ID	Annotation
Am01G028240.1	myb domain protein 94

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G028240.1	mRNA	Chr01	173307543	173309274	+

Sequences

CDS:

>Am01G028240.1
ATGGGGAGGCCACCATGCTGTGACAAAATAGGAGTTAAGAAAGGACCTTGGACTCCTGAGGAAGATATCATCTTGGTCTCTTACATTCAACAATATGGACCTGGGAATTGGAGATCAGTTCCCAACAACACAGGTTTGATGAGATGCAGCAAAAGCTGCAGACTTAGATGGACAAACTATCTTCGACCTGGTATCAAACGAGGTAACTTCACCGATCATGAGGAGAAGATGATTCTTCACCTCCAAGCTCTTTTGGGCAACAGATGGGCTGCTATAGCATCATATCTGCCACAAAGGACAGACAATGATATAAAAAATTTCTGGAATACACATTTAAAGAAGAAGCTGAAGAAAGATCATGAAAGTGGGAGTGAAAATGATGATGAAGAAGAAGAAGGACGTCATTCTCGTTCTCGTTCTCGTTCACAAGCAAAGGGAAAGGGTCAATGGGAGAGAAGGTTACAAACAGATATTCATATGGCCAAACAAGCTTTGTCTGATGCTTTATCCCTTAATGATCAGCACAAGCCAACAGATCATAATACCAAGCCTTCAACTTCAACTTCAACTTCAACTAATTTTCATGATCACCAACCCTACGCATCAAGCTATGAAAACATTTCAAAATTGATGCAAAACTGGATGAAATCTCCAAACTCATCAGCAGCTCATGAAACAAATTCTTCATCAGGATACTCCTTCACCAACAATAATAACATGGTCACCACTGGATCTAGTTCTAGTGAAGGAGCACATAGCACCACCGCTTGTACACAAGATCATCATGCTTTTGACTCTAATTTGTTGACCTCCAAATCTGATATCTCTCGACCTAGGTCAGTTGAAGAGGAAAGGAATAATCCAAACTTGGAAACGCAGGCCCCTCTAACATTACTCGAAAAGTGGCTTTTTGATGATGGGGCAAACCAGTGCCATGAAGATCTAATCAATATGTCCTTGGATGAAAGTACTGCAGGTTTGTTCTAG

Protein:

Promoter(3k):

>AM01G028240.1
CAAAAGCCAATAATAATTAGACATAAAAAAGGAAAACGACTTTATTTGAGGGACATGAAAAGGAAAAACAAAATGCTAACAACTCTAAGCCACTTCCTTAGTTGACGTTAACTTAGCAATTAATGGGAGGGATCATATTTTAGTTTCTGTTTTAATTACTTGTTTATAAGTAAAAATAAGAATTAAAAGCGAGAAGGAAATTATTCTCTCCCCATGTGTATTGTATTGAATATGTTTGTAATTCAATTGCTCCTAGTATTGTTAGGTGTCACTAGTAAAACATCCAATGGGCCAATATGTGGCCCAGTCGAAATATAGGCCCAATATGGGCGCTGCATCTTTGTATATATATATACCTTTCGACAGCTTGTAAATAACACTCTTTCGATACAGTTTTGAATTACTGTTTAATTGTCTTGCCCAGTTTTTCCCTCTATTTTTCTTCGTTCTCTATTCTTTTCCTTCTCCCTGCGCAACTCTCCTCCAACATATTGAACTATTTTTTTTTACATGTATGTGTATTGAACTTCTGTTAAACTGATTGTCAAAAACAAATTTTCTGTTAAACTGTTTATATAGTTACAAAATAGTCGATCAATATGATGAAAAGTTTTTTAAAAAAGTGTCCCATTAAATTTTACCTCTATCAAATTTATAAAAATATTTATATATGTATAGCCCATCAATAAATAAATAGTTGTTTTGTCAAAAATAAAAATAAAGAATTGTTCGTTTTATTGACAAAATAAAGAATTGTTATTAATAATTGATCGTATGCATCCCGCATCCACACAATTCGATTGCAACATTTGAGCTAACACTTGGAGGCGTAATATAATGTGTAAAATAATAGCACACACCGAAAACATTGTTATAGACGGTGTAAAAAAAATGAAAACATTGTTATAGATGTTTTTCTTTAGCTGAAAAAGGAAAAAAAGAAAAAGTGGTTCCATTGTTGGCATATTAAATGCCACACGGATTTGTTATTATTTGTAGTTCATAATGTTTGTCGAGAGGTAGAGAGATCGAGTGACATACGCGTAGCAGGCAGTTGTTAGCTAAGGAAAAAAGAATTGAAATCACCTGTCTTATTTTTAGTTTTTCTAATAAATACATAACACTTTACCATATAATTCAACAATTAAGAGAAAACAAATAATTAAAAGTTTTTTTCTTCAAAGTTTAATTTTTAGTTTAAATATGTTTATAGACCGGGGAGATTAGGGGAGAGCTACGTTGCGGCTGTGTAGGGGAGAGTTGCAGATCTGAGTGGTGACTTGCAGCACTAGTCGCAATTCAACTCTGGTAACTCACCGGTGAATGCTCGGTGTTGCATGACGCACGACGGAGAATTAGTAGGGATATCATGAGAGTAGTAGCGGAGCCTGGTGCACGATGCAATTTCTAGGTTGTGATATGGTTTGGCATCAAGGTATGGTATGACTCATGGTCGTAGCGATTGGCAAGGAATGGAGGTTCGCGCTGTGTGGTTGTGGTAGATCACGTGTAAACATCGCATGAGATGTGACATAGGCAACCAAAAGTGGTGGTGAGTGTTGGGAAAGAAAAGGAGAAGAAGAATTAGGGTTTGTGGTAGAAAAAATTGGCTCAACTGCCATGTGTTCGGTATGTAGGATCAATCATCTGTTAATGAGATCATCAAGAGGGACTAACAGAAAGACAATTCCAAATGTTAGGGGACTAACCATCAACAATTTTTAAGTGGATCAAAAGAAACATTATTCTTTTTAAAGGGCAAGCATAAGAAGTAATATTATGAGTCCAAACCCAATAATCCTTATCCAACTCAACCCGAGAGTCTAACTTTGAAACCAACTTTTCCTCCCCAAGTAAAAAGGCACTGCCTCCATGGAATTGCCCAAATCCACTGGTAAGCCAAAAATCCGCCATAGGACCTAACCTGGTGTCAGAAAGTAAACATGTTAATTAACATGATAAGGAGCAAAATCATAAGTAATTTTTTTTGTAAACAAATGTATCATCCACGTTGACTGTGCAGACTAATCATTCTCGGAGATCCATTTAAAGGGGTTGACTTCTCCCAACAAATGTTTTCCATACGCACCGGTCAGGGATCGAACCCATGACCAAATTGTTAAGGGACCCATCTTGGTAAAGCATAAGTATTTTTATCAATAGGAAGAAGGGAGTAGAAAAATACAACATTTACAAATAAGTGCTGTCAAATGTTTTAAAAAAATAAATAAAAATATTAAAAAATACAACGTTACTGTTTTTACGATTTTTGTTTTCTTTTAAAAGAAATATTTTTAGTATCTTAACCATATTATCTAGTAACTAATTAAGAGAATCAAATTTATATTTGACATATAAATTCAAGTTAAAATTTATATTTGAGTTAAAATTTTATTTGACATATAAATTCGAGTTAAAATTTATATTTGAGTTAAAATTTTAGTATCTTAGCCATATATATATATATATATATATATATATATATATATATATATATATATATATCAGAGAATCAAATTTATATTTGACATATATTTTGTGTATAAAATCTATTTGGGTTACGTGAGATATATCATTGGGAAGCAAAGTGGGAAAAACCTTCCTTTAAGTTTTATTTAAAATTACAAACACCTCGCCTCTGCACCCTCTATTTTTACTTAATAGAATGGAGGTTTGTATAATCTAGGAGAGATCAATATATTTTACGAATTGAGGGGTACCGGTGCATGTGTTATCTAACAAAAACTAAAGGGAGGTGAGTGTAATTTCTCCTAATAATAAATATTAAAATGAGTGCTCATTATCATTAAGGTGAGTTTTTTCTTGGTGTTAAGAAATTTCCATTTTTAAACGGAGCTGGTTGTCTTGTCTGTCTCTATATAAACGTACCTACATAACAAGGCAATTCCAGTTGGGGAGGCTTGTCTTGTCTCTTCATTTATGAGTAGCTTTTTTCTCTGACTGAAAAAAAAAAGGTGAGCTAGATAGGTTTTGATCAAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	14	61	8.50E-31
PF00249.34	Myb_DNA-binding	67	112	8.50E-31
PF13921.9	Myb_DNA-bind_6	17	76	1.70E-18
PF13921.9	Myb_DNA-bind_6	70	120	1.70E-18

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0009626	plant-type hypersensitive response	Biological Process
GO:0042761	very long-chain fatty acid biosynthetic process	Biological Process
GO:0001666	response to hypoxia	Biological Process
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0009617	response to bacterium	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A0D4D983	_

SwissProt

SwissProt term	Description
MYB94_ARATH	Transcription factor MYB94

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G47600	myb domain protein 94
Medicago sativa L.	MsG0680030764.01.T01	_
Oryza sativa L.	LOC_Os08g33940.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa017450	_
Glycyrrhiza uralensis Fisch.	Glyur000496s00030952.1	_
Codonopsis lanceolata	Cl_chr02_26180T	_
Arachis hypogaea L.	AH01G34090.1	Myb-related protein 306 like

Expression pattern