Gene detail

Detail information of Am01G028030.1 Annotation

Gene ID	Annotation
Am01G028030.1	ABC2 homolog 6

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G028030.1	mRNA	Chr01	172684501	172693373	+

Sequences

CDS:

>Am01G028030.1
ATGGCAAATCCTTCCCCCTCGACCTTCTGGATTCAGGCAGACGCTCTTCTCCGAAAGAATCTAACCTATCAGAAACGGAACTTGAAAACGAACCTTCGTCTAATTCTATTCCCGTTGATCCTCTGCGTCTTGATGGTTATCCTCCAACGTGTAGTCGATGATTTCATCGACAATCCGGCTCTCAAATGTGGCTGCATTTGTGCGAATAACACAAGCGGCGATCAATGCCAGAAGCTTTGTGGACTCAAATATTCGAAACCGGAACAAGTTTTGAGCTGTGACATTCCCAAACCACCCGAATGGCCTCCTTTGTTGGAGCTTTCGGCATCAGGCCCATTTAACATGCTCTTCACCGCCCAAAATCGCTCCTTTGCACAAAGTGTGTCTAAAAATATGTTCCCAAGCGCCTCCACTACGAGTCTCTCTGATCCCATGGAGGATAGTTTCATTAGTTTGGATAGTTTGGCAACATATGTCTTGGGAACTTCAACAGAGACCGATTTTGATAATTTTGGCGAACCTGGTTTTACAGAGGGTCAAATTGTTTATCTACAAACTCAGTGCCGGAATGATTCTTTCATTTCTTTCCAGTTACCAGCCATTACTCAACCGCTAGATCTGCAAGCCGAATGTGCTCAGGGTATACTATCATGGCGTAATAGTTCTTCTGAGATCAACGATGAGCTATTAAAAAATGATATCCTCAAGGAGATAGTTTCAGCTTTTGATTTTCTAAACTCAAATGGGAATAGATTTAATGTCACTCTATGGTACTACTTACCTGCCGACATGAGGGATACTAGTTCTGCTATTCAGTTGTTGCGGATTCCTCGTTATGTAAATCTGATATCCAATGCCTACCTGCAGTTTCTGCGTGGACCAGATACCAAAATGTTCTTTGAGTTTGTAAAGGAAATGCCAAAACATGAGACCTCACCCAAGTTCGAGGTAGCTTCTGTTATTGGTGGTCTGCTCTATACATGGGTCGTCCTGCAACTTTTTCCAGTTGTTCTGACATCACTGGTTTATGAGAAGCAGCAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGACGATTTCATATGGTTATTTTCTTGCCATATCAATGATCTACATGTTGTGTTTTGTGATATTTGGCTCAGTCTTAGGATTAAAATTCTTCACCTTGAACGACTACAGTATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATTTCATTGGCATTTTTGATGGCTTCCCTATTTTCAAATGTTAAGACTGCTACAGTAACTGCATATATAGGCGTCTTTGGAACTGGCCTATTAGCTGGCTTTCTTTTCAAAAATTTTATTCAGGATATTTCCTTTCCAAGAGGGTGGTTCCTTTTTATGGAGTCGTATCCTGGGTTTGCCTTATATCGGGGGTTATACGAGTTTGCACAATATGCCACCACCGGCAGTAATTTGGGGACTGGTGGTATGCAGTGGAAGGATGTCAGTGATAAAGCCAATGGCATGAAAGAGGTCTTAATTATCATGCTTGCTGAGTGGATAGTAGTGCTTTTTGTTGCTTATTACATTGATCAAGTATTGTCATCAGGAAGCGGAAAAAGTCCTCTTTTCTTCTTAAAAAGATTTCAGAAAAAGCCTCCTTCAGCATCCCGAAAACCCAGTATCCAAAGGAAGTTGTCAAAAGTTTTGGATGAAATGGAGAAACCTGATGTCATCCAAGAGAGGGAGAAGGTGGGGCAGTTGCTACAAGAACCAACCAATAACCATGCAATTGTATGCGATGACCTAAAAAAAATCTATCCTGGGATGGATGGAAATCCAGAGAAATTTGCAGTAAGAGGATTGTTCCTTGCTGTGCCTCGAGGGGAATGCTTTGGTATGCTTGGTCCCAATGGTGCCGGGAAGACTTCTTTTATCAGTATGATGATTGGTCTCACAAAGCCAAGTTCTGGATCGGCTTTTGTTGAAGGCCTAGACATCAATACTGATATGGGTGGAATATATACTTGCATGGGAGTTTGCCCACAGCATGATTTGCTGTGGGAAAACTTGACAGGTAGAGAGCACCTACTTTTTTATGGAAGACTTAAAAATCTTCAAGGCTCGGTCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAATTTAAACCTTTTTCATGGAGGGGTTGCTGATAAACAATCTGGAAAATATAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGATCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGTTTAGACCCTGCTTCAAGAAATTGCTTATGGAATGTTATTAAGCTTGCAAAACGGAATCGTGCAATCATTCTGACCACACATTCCATGGAAGAGGCAGAATTCTTGTGTGATCGATTAGGAATATTTGTAGATGGTAGCTTGCAGTGCGTAGGAAATCCAAAGGAGCTGAAAGGCAGATATGGAGGAACTTATGTGTTCACAATGACAACATCTTCGGATCATGAGGAGGATGTGGAGAACATGGTACAACAGCTCACCCCAAATGCCAACAGGATATACCGTCTCTCTGGTACCCAGAAATTTGAGCTGCCAAAAGATGAGGTGAAAATAGCAGATGTATTCCGAGCTGTTGATGATGCCAAGAGAAACTTCACTGTTTCTGCATGGGGTTTAGCTGACACCACGTTGGAAGATGTCTTCATTAAGGTAGCACGTGGGGCTCAGTCATTTCAGACCTAG

Protein:

Promoter(3k):

>AM01G028030.1
ATTAGTAGGCTATTCTGATTCAGATTGGTGTGGGGATAAGGCTGACAGGAGAAGCACAAGTGGGTATTTGTTCAAGTTTAATGGAGCCCCAATCTCATGGAGCTCCAAGAAACAGAGTGTAGTGGCATTATCTAGTTGTGAGGCTGAATATGTAGCAGGCTCAGCTGCTGCTTGCCAAGCTAACTAGCTTGATTCTCTAATGGAAGAACTACTGCTAAGGGAAAAACAACCAATCAGGCTACTGATTGATAACAAGTCAGCAATCAACTTAGCTAAAAATCCCGTATCTCATGGGAAAAGCAAACACATTGAAACTCGTTTTCACTACCTAAGAGACCAGGTGAACAAACAGAAGCTACAACTAGACTACTGTCTTACAAAGGAGCAACAAGCAGACATACTCACTAAAGAAGTCAAAGGAGAACAGTTTATGAAGCTGCGAAGGAACCTGGGACTGGTTTTCTTCGAGGAACATAATTAAGGAGGAGTATTGACTTGTAATTCTGTTTACTTTTACTTTACCTAGTTACTGAAAAAATGTACCTGTTGTTAAAATTAGGGTTTTCGCAAATCTAGGTCAAAATGACCATTTGTAAACAAAAACAGAATCTGTTACAAGTTGTTAGGAAAACTGTTTAGAAGATTAGCTGGGTTGTTAGTGTAACTAACCTAGATTAACAAACCCAAATCACTTCTATAAATATAATACATGTATGTACACAGAATATATGAGAAAATTACAGAAGTGTAATAAAAACGAAGGAGAAAGCTTTACAATGTCCTTGCAATCCATTTGTTCCTTCTGCGTTTTTTTTCTTCTTTTGCTAACTGTTGCGCTATTGAGTTTGTCTTCTCTCTCGTTTTTGGTCATGTTGCACTGAAACTTCATCTTTCTCTCTACAAGCGTCAGTCACTGCTTGCTAGTCTCCTTCCTTGAGGTTTGATCTCACCAACAGAGGCGTGAGGTACCTGCAATTGAAAAGAACAGAAGTTAGGGTTCAGAGTTCTAGAGAGAAGGCAGAGAAAAGAAAGAGAACGAAGATAGAGAGAGAAGGAAAATTACGTGTGAGGCGCAAACTAGGGTTCGTTGAATTAACCCTTCTCTGCTTCGCTTGTTTCTGGATTCGGGTCACTTAAGTGCACAGTACCTACAACACAAAGATTTGGGTCAGTTTTGTTTTTTCAATTCTAGGCCTATTCTTTTGCTATCTACACCATACAATTTAATATAATACACCAATAGTGACCTCATTCTCTCTCTGGCCTCTGTGACTTTATGTTAAATGAATTAGTATTGTTTTAATTTTTTTCTCCACTGTTTCTCTCTCTTTCCGCCTAATGCACATTTAGTTTTCTTAGTTTGTTTTTGTTTCAAGATTTAAACTGGTTACCGGTTATGAACCAGTTTTGAATTGGTTTACAAACTAGTTATAATAATAAACCGGTGTACACAAACAAGTAAACCAAAACCAATTTTTAAAAGTGGTGTGGTGTAAAATGGTAAGGTTATTGTACCATGCACACCCCTACCCCTACCATCTTATCCAACCGCTCTTGGGTTAGTTAATTACCGTAATTTCTTTATTCTTTAGTTAATAGTTAATTTAGTTAATATTAATGACAATAAGTGATTTGTCAAAAAGAGAAAAATCAGTGATCCCTTTTTTCTTTTTATTATTAGTTTATTTTATAAATTTTTTGTATTTGTAATTTATTAAAACAACAATTATTAGTATTTCCTATTAACACCTACAATTTATATACCAACAAGGGTTGGTCTGAGTTGTAGCTGGGCTCGCATCCCACCCTAAGGTCTCAGATTCGAATCTAGGGTGTGACAAAAACTCTATTGGTAGTGGAGAACCACACAGACCGACAAAGAAAGCTAGGTATACAACCATCTAGGTTCCTCGACTTAAATTAATCATCGACAAAGCCAATGGATATTGTGCCCAATAACACAGTAACAAAAAAGGACCTACAATTTATATATTTAACATGCAGTAGAATCACATTTTCATAGTAAAATTAATATTGATTAAAACACAGTAACAAACAAACAATTTTTATCAAGAACTACAGAGCATTTGATTCTACATTGCATACAAAGGTAGCTCCGTTGCGAGCTAAGGTACATGAAGGAGTTGCATGAACGAAGTCCAGGGTTTAAACCCCGGAAATTAACATTCCCCCACTCCCACTAACATTTGCTTATAAAAAAAAAGATAGAGTGGGGCCACACTTTTGTCGGGCACAAAAGTAAATAAATTTTATAAAGAAGACATAGAATTATAACCTATTATATTCAAACTTGTTAGCATGGGAAACACTAGATAACTTTTTTCACAAAGAAGGTCTTTCTAATGAATTTCCAATTGAACTCCTGGAAGAATTAACGCTATACACTGAATTAACTAATAATTATATTGGTTTTACTTTTATTTATCCTAATATTATTGTATTTTGTTATTTTTGTCTTTTGACTCATTTATATTTTGAATGTATGTAAAAAATCCTTAAAATCCTGTCAAATTTCACAAGTCCATAAAGTCCTACAGAGTCCACAAAGTCCTACAGAATCCTTATGATACAAATCCCATTAAAATCCTAACTGATAGTCATGAAAATCCTGCAAAATCTTAAAAGTCAAGAAATTCTTACAAAGTCTTTTAAAATCTACTGGGCTTTTTTAACTATTTTTTTTTTTAAAAATCTCAAACCAATACATCGCAAATGTGACCTCGAGAAGTTGAGGATTCCAATAAATAAATAATATTTAAAAAGGTTAGGACTAATTAGGAATATTATTACTTATTTGAGATTATTTATGCCATGGAATATTTGAAGGACGCATATAACTCAATTAAAAAGTCATTTTGAATTAAAAAGATGTGATTATCACGTGATGAATACAAATGGTGAGGGAGCAAACCGGAGGAGTTCATATATAACGGCAAGAATTTCATAGATTTCGCTGAGAAAACGAAGAGACAGAGGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00005.30	ABC_tran	623	763	1.80E-21
PF12698.10	ABC2_membrane_3	304	527	4.70E-11
PF13304.9	AAA_21	735	794	1.80E-10

Gene family

Gene family	Subfamily
Transporter family	ABC

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	Biological Process
GO:0016020	membrane	Cellular Component
GO:0016887	ATP hydrolysis activity	Molecular Function
GO:0005319	lipid transporter activity	Molecular Function
GO:0005524	ATP binding	Molecular Function

InterPro

InterPro term	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR017871	ABC transporter-like, conserved site
IPR003439	ABC transporter-like, ATP-binding domain
IPR026082	ABC transporter A
IPR003593	AAA+ ATPase domain

trEMBL

trEMBL term	Description
A0A9D4X8Y7	_

SwissProt

SwissProt term	Description
AB7A_ARATH	ABC transporter A family member 7

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G47780	ABC2 homolog 6
Medicago sativa L.	MsG0880046436.01.T01	_
Oryza sativa L.	LOC_Os08g30770.1	ABC transporter, ATP-binding protein, putative, expressed
Cucumis sativus L.	Csa005380	_
Glycyrrhiza uralensis Fisch.	Glyur000020s00001780.1	_
Codonopsis lanceolata	Cl_chr02_26490T	_
Arachis hypogaea L.	AH15G20740.1	ABC transporter A family member 7 like

Expression pattern