Gene detail

Detail information of Am01G027490.1 Annotation

Gene ID	Annotation
Am01G027490.1	zinc ion binding

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G027490.1	mRNA	Chr01	170932603	170942946	+

Sequences

CDS:

>Am01G027490.1
ATGGCCGGCGGTGGCGAGCTTTCCTTGTCGGATAAGGAGGAAGACGATGTCGAGGACACGCCGGACATTCTGTCGCGATTTCGACTAGTGGATGCTCCTATACTCCTTTTCGTTTGCTTTCATAAGGCTCTGCGTTCTGAAATCGATCGACTCCGTGAGTTGGCTGAATCGGCGTCGTTGGTTGATGATCAACATGTTTACCGAGAAATTGTCGTTAAGCTTCTACAACGGTTTCAGTTTCTGAAACTAGCTTTTAAGTATCATTGTGCTGCAGAAGACGAGGTTATTTTCCATGCACTGGATATGCATGTCAAAAATATTGCCTGTACATATTCCCTCGAACATAACAGCACAAATGGCCTTTTTGATTCTATCTTTTGCTTCTTGGACGAACTGCTGGATGCTAAAGAGAATATTTCTATGCTGTTCCAAGAACTTGTGCATTGCATTGGCATCTTGCAAACCTCCGTCTACCAACATATGCTGAAAGAAGAAGAGCAGGTTTTTCCTCTGTTGATTCAGAAATTGTCTACTAAAGAACAAGCGTCACTTGTGTGGCAATTCATATGTAGTGTTCCTGTAATGTTACTGGAGGAAGTTTTGCCATGGATGGCATCCTTCCTTTCTGCAGACAAACAAGTAGAAGTTACTCAGTGTTTAAATGAGATTGCACCCATGGAAAAAGCACTGCAGGAGGTTTTGGTTTCTTGGCTTGGAAGCAAAAAACAAACCTTCACTGAGACCTATTTTCAGAGCGAAGAACTTCAAGGTGTTCGTGAATTCCTACATATGGAAAGTTCACTTGGGCTGAATTCTCACAATGGGAAATCTGAAGAAATTTTAAGTCAGATGAAAGTGAATGGCCAAGAAACAGAAGATGTGGTCAATCGAGTTAATGTTCTTCATCTTTGGCATGGTGCCGTCAAGAAAGATTTGCAAGAAATTCTTCAAAAACTCCATTTCATAAGGAGTTACAGCTGTTTTCAAAATTTAGACTCAATACTTATCCAGCTAAAATTCTTGGCTGATGTTCTCATCTTCTACAGCGATGCTTTGAAGAAATTCTTTCGTCCTATACTGAATAAACTTGCTTATGACCAGTTTTCCAAGTCTACCGAACAATTTCTAGGTGAAAGTTGCATTGAAGATATACAACACTTGCTATTCTATAACATAGAAAGTGGAATGCCTTTGACCAAGTTTGTAGGCAAGCTTTGCAGAAAACTTGAATCATTTGTATCAGCGGTCAACAAGCAATTTGCTTTTCAAGAAATTGAGGTGTTTTCTGTCATTGGAAAGAACTGCAGAAATGGAATGCAAGGGAAACTTCTAAGCTTGAGCATGTATATGATGCCACTTGGGTTACTAAAATGTGTTGTAACTTGGTTCTCAGCTCACTTGTCTGAAAAAGAATCCAAGTCCATTCTCTATTACATTAAAGAAGGAAGTAATTCTGTCTGTAAAGATTTTGCACCATTGTTACATGAATGGTTCCGCATTGGTTATTCAGGTAAAACATCTGCAGAAAATTTCCGACAACAATTGCAGCACATGTTTAAAAGAAGATACCCCTTTTCACTTGAGAAAATGCAAGAAGCTGTTGGGTTTTCTTTCTTAAACTCTGACAAGAAGCCTCATAAAAGCTCTAGCAAGAATTGTTTGTCCCATTCCTCATCTTCAGTACCCCACAATGTGAACAAGTATGAGACACCATACTCCACAGGAATTAATCTACATATATTTTTCCCTGCCACGGCTTTGAAGTTAAATCAACATCCAAGATTTCTTGCAACAAATCCCTCTATTTCCTTTCTTAATGATCCAAAACCAATAGACCTAATATTTTTATTTCACAAGGCTATTAGGAGAGATTTGGATTACCTGGTTATTGGCTCAGATCAGTTAGAAGAAAATGGTGAGTTGTTAATAGATTTTCACAAACGATTTCATCTCATATGTTTTCTTCATCAAATTCACAGTGATGCAGAGGATGAGATAGTTTTTCCAGCCTTAGAGACAACGGGCAAACTAAAAAACATCAGCCATGCCTACACCTTTGATCACAAACATGAAGTTGATCACTTCAGTAAAATGTCTTGCATTCTCAATAAGATGTCTGAATTACATCACTCAGTTTCTACTACGGATTCAAGGATAAGGGATAAGAGAAGGCTAAGACAACATCATTTATGTAGGAAATTGCAAGAAATGTGCAAATCAATGCATAAGTTACTTTCCGATCATATAAATCGCGAAGAAATAGAAATTTGGCCTATAATTAGGGAATTCTTCTCAAATCGGGAGCAAAAGAAAATTGTAGGATGCATGCTTGGAAGAATAAAAGCAGAAATATTACAAGATATGATACCTTGGCTAATGACATCTTTAACCCAAGAAGAGCAACATGTTTTAATGTTCTTATGGTCCATGGCTACTAAAAATACAATGTTTGATGAATGGTTAAGTACATGGTGGCATGGGTACAGTTTAGCTAAGGTAACAGATGGATCGAATGATGTTCCTCTACAGACGATTGAGCCACTAGAGATTATATCCAAGTATTTATCTGAAGAAGTTCTTAATGAATTACAACAGGAATCGTCTGCCAACAAAAGAATAAATCTTTTGCAGAAGGATCATATTGGTGATAAAGCAGAGCTATCTAGCTACAATCTTGATGATGATAAGGTTCATTATGCAGAACAAAATGATAATCATTGTTCAGATTGCTCAGACAGATTTCATGGAATTGAGAAACATGGAACAAATACCACAGATCCGATATACCATGAAGGTCGGTCTTTTCAACACCGTGACAAATCTGGGCATTATGAACGACTTCTGAAATTAAGTCAAAATGATCTGGAGATGGTAATAAGAAAGGTATCTCGTGACTCTTGCTTAGATCCTCAGAGAAAGTCATACATAATACAGAACTTGCTAATGAGCCGTTGGATTATTGGACAGCAGATCTCTTTCACAGAAGTCAATATCAAAAGCGATGGACAGGAATTTCCTGGGAAGCATCCATCTTACAGGGACCCTCTCAAACAAATCTATGGTTGCAAACATTACAAGAGAAACTGTAAGCTTTTTGCTCCCTGTTGCAACCAACTTCATTCTTGCATACATTGCCATGATGAGACATCAGATCATTCAATTGACAGAAAATCTGTTACAAAGATGATGTGTATGGAGTGCTTGATAATTCAACCAATCAATGACACATGCTCAACAGTTTCTTGCCGTAATTTATCCATGGCAAAATATTACTGCAGTATATGCAAGTTATTTGATGATGATAGGGAAATTTACCACTGTCCCTATTGCAACTTGTGCCGAGTCGGAAAGGGTCTAGGTGTTGACTACTTTCACTGTATGGATTGCAATGCTTGTATGGCTCGTTCTCTTATGATACATACATGCAGGGAGAAACATTTAGAGGATAACTGTCCAATTTGCCATGAATATATCTTCACGTCCTGCTCTCCAGTAAAAGCCCTCCCATGTGGTCATGTGATGCACTCGACCTGTTTTCAGGAATATACTTGCTTTAACTATACCTGCCCAATATGTAGCAAGTCACTTGGAGACATGCAGGTATATTTTAGGATGTTAGATGCATTATTGACTGAGGAAAAAGTTTCTGATGAATTTGCGGGTCAAACACAGGTTATATTATGTAATGACTGTGAAAAGAAAGGAGCAGCTCCTTTCCACTGGCTTTACCATAAATGCCCTCATTGTGGTTCGTACAACACTAGAGTTCTATGA

Protein:

>Am01G027490.1
MAGGGELSLSDKEEDDVEDTPDILSRFRLVDAPILLFVCFHKALRSEIDRLRELAESASLVDDQHVYREIVVKLLQRFQFLKLAFKYHCAAEDEVIFHALDMHVKNIACTYSLEHNSTNGLFDSIFCFLDELLDAKENISMLFQELVHCIGILQTSVYQHMLKEEEQVFPLLIQKLSTKEQASLVWQFICSVPVMLLEEVLPWMASFLSADKQVEVTQCLNEIAPMEKALQEVLVSWLGSKKQTFTETYFQSEELQGVREFLHMESSLGLNSHNGKSEEILSQMKVNGQETEDVVNRVNVLHLWHGAVKKDLQEILQKLHFIRSYSCFQNLDSILIQLKFLADVLIFYSDALKKFFRPILNKLAYDQFSKSTEQFLGESCIEDIQHLLFYNIESGMPLTKFVGKLCRKLESFVSAVNKQFAFQEIEVFSVIGKNCRNGMQGKLLSLSMYMMPLGLLKCVVTWFSAHLSEKESKSILYYIKEGSNSVCKDFAPLLHEWFRIGYSGKTSAENFRQQLQHMFKRRYPFSLEKMQEAVGFSFLNSDKKPHKSSSKNCLSHSSSSVPHNVNKYETPYSTGINLHIFFPATALKLNQHPRFLATNPSISFLNDPKPIDLIFLFHKAIRRDLDYLVIGSDQLEENGELLIDFHKRFHLICFLHQIHSDAEDEIVFPALETTGKLKNISHAYTFDHKHEVDHFSKMSCILNKMSELHHSVSTTDSRIRDKRRLRQHHLCRKLQEMCKSMHKLLSDHINREEIEIWPIIREFFSNREQKKIVGCMLGRIKAEILQDMIPWLMTSLTQEEQHVLMFLWSMATKNTMFDEWLSTWWHGYSLAKVTDGSNDVPLQTIEPLEIISKYLSEEVLNELQQESSANKRINLLQKDHIGDKAELSSYNLDDDKVHYAEQNDNHCSDCSDRFHGIEKHGTNTTDPIYHEGRSFQHRDKSGHYERLLKLSQNDLEMVIRKVSRDSCLDPQRKSYIIQNLLMSRWIIGQQISFTEVNIKSDGQEFPGKHPSYRDPLKQIYGCKHYKRNCKLFAPCCNQLHSCIHCHDETSDHSIDRKSVTKMMCMECLIIQPINDTCSTVSCRNLSMAKYYCSICKLFDDDREIYHCPYCNLCRVGKGLGVDYFHCMDCNACMARSLMIHTCREKHLEDNCPICHEYIFTSCSPVKALPCGHVMHSTCFQEYTCFNYTCPICSKSLGDMQVYFRMLDALLTEEKVSDEFAGQTQVILCNDCEKKGAAPFHWLYHKCPHCGSYNTRVL*

Promoter(3k):

>AM01G027490.1
GGATTGACTAGCAAATTGCTAACGGAAGGATAATTTTAAAAAATGTTATTTTGCAGAGACTTTTTAAAAAAAATAAATTTGTAGGGACTTATTTTAAAAACCACTGTATTTGCAGGGTCGAAAAACATATTTAAGCCTTATTTATTTAAAATTTGTAAGTTCTCATAGTGAATTTGTAAAAAAAAATGAAAATTAGAATTTGCTAAATAAAATAATTAGCTTTTTTTTATAACCTGTAAGTTCTTTAATAAAATTATTTACTTTTTGTTTTAGAGATTTATACATGAAGAAGACTTGATTCGTGTTTATTATAATAAAGAGAGTCATTTTTTAATCTTCTTTATCATCTACTATATTCATTAAAAATCATATTCTTTCTTAAGCTACTAAAAATAGCTTTTCATCTTAATCATAAAAATAATTTTTTAGATTCTAATTATTATTAAAAACATAAATAAACACAATTAAAACTATTAAAAATGATCTTTTAGTTAAAAACACGACTTTTCTCTCTAATAATTGGTAAGAAAAGAGCTCTAAATCTTATTCAACTTCATTTCACACATCAAAATATTAAATTTTACTTAAAGTAAAATAACCCAAATTTGTTCCCCACTCCTTAATCTAATATTTACATTTTACTAGCACTAATAGTTGATAAAAAACATCTTACACGATTTTATTAATTTCTAACTTCTTAAATTTTAAAATTACTTTATATCTCAATTTTTTATTTTTAAAAGTATATGCCAAATTTATCATAAATTAGAAAAAAGTTTAATTGGTATACACCATCAACCAAACAATTTTGATGACGTTGTAAAAAAGCTCGTACACTTAAAGTGTATATAAATTAAATGATTCACTTCATCTCAACCAGTGGCGGACCTGGCATATGTCCAGGGGGTTCGGTTGAACCCCCTGGAATTTTTTTTTTGCACTAAACACTCTATATAAATAGCCTAAATCTCCTGAAATTTTAATTTTGACACCCCTGAAAATTTGAAATTGTACTAGTAGACCAAGTTTTGCACCCATTTGACACCGGCCTTAAAAAATTTGACACCCCTGACCCCGGGGTCCTGGGTCCGCCACTGATCTCAACTACCTTAAAACTCACTATACCATATTTTTTTGATTGATTGACTGTGTAAAACAACTTGCTACAACAATGCATACCAATTAAACTCGTAGAAAAATACTATCTACAAAGAAGCATTTTGCTAAAAAAGAAAATATTAAGGGTCAGTTTGGTTGAAAGGAGATCGAGGAGTGGGGAGGAGAGAAAAGAGGTAGCAATGTTTTAATTTATGTGTGTTTGGTTCAATTTTTAGGAGGAGAAATGAGGGGAGTGGAGGGGAGCAAAATCTCTCCTAGACCACTTTTTGCTTCCCCTCCATAATTGGGGGGATTTGGAGGGGAAGGGAGAAGAGTTATTAAAGTGTTAATTACATTGACAAAATTAATCTCGATTATATGTAAAAGCTAAGATTATAAGGATAAAAAAGTAAATTAGTTTTAAAATCTCCCTTTTGTGAACAGAGCATATTATTAAATTAAAATCTCTCTTCTCCCCCTCAACCAAACATATATCATATTATATTAAAATCTCTCCCATTCCCTCGTTAAATTCCCTCCAACTCCCCCTCCCATTGATCAAACCAAAGAGACCTAATGAAAATCTTCTTAATTATTAGAGAAATAAAAGAGTGATGTGATGTGGATTAATAAAAAATACGAATTAATTAATAACAAAATTGGTAGTCTCCATTGTTTTGAAAACCAAGCCTGTGAGACGTTTGAGTCATAGTTCAACCGCTTTAAATTGCTCGAATCATGATGAAATTGCGATCAAATCACTGAAATAACCAAATCGTAAATGATGTCGGTTCATGATTTAAGAGGTTTCATTCAATAGCTTCATTTTTTCATACACTAGTAGTCTCGACTCTAAGGTCTATGTGAGGACTTTGTCAAAAAAAAATGTCTCAAGTGAGAATAGCGGTGACAAATGCAAATAAAAATTGTAGAGTGATTCATGAAACTAAAAAGAATTGTGCTTTTAGGGTAAGAGAGCAAATCAAATTCATCACCGGCGAATTATTAAATATGACCGTAGGCTATAATATAAAAATTCATCAACGGTTGAGATTTAATACTGGTTGATTCAATCTTAACCGCTCATAGCATTTTACACGATATCTTACAATCAATTTTAGTGATTCACCGAATTTGATTTGCTCCATCATCCTAAATAGAAATACAGAAAAAAAAGACTATGACGGAAAAACAAAAAAGGAACTGTGACGTTTGCATAACAAAAACAAAAAAAACTATGACGTAAAAAACTTTTTATTAACTATTAAAAGAAAAACAAGAGCGCCTTGGTTAGAAGAGCAAATCTCACTCGAAGACAAAACGTGTCGCCGGCATGGGATGGAACAAACCCTCAGCCTCACGAGTCACGGCCTCGGCCATGGAAAGCATGAACGTGGCAATTTCCTTGACCCACCCTCGCCCCCCTTAGTTAGCAACGAGAATCGAGAACTTCGAAGTTCGAATACGCCAAATCTACGCTCACAGTAATAATTAAAAAACAAACCGAATCCTACCCTGTCTTCTTATTATTCAAAGCAATCTCCAGCGCGCCAAACATATAATTAATAGGCGCGTCTTCTTCACGCTTCATTTGTTAATTCACGGAGCTGGCGCGCTTCATGCTACTCTCCAGTCTCCTCTCAATATCATATCATGTCACACATCTGAAACGCCAAACCGCAACAAACAAACTACTCTGGCCGTTGGTTACAACGTCTTTTTCAATTTCCCAACTGTGCTTTTTTTAATCCCTCGATTCAGTTTTTTAAATAATTATTATATATTATTATTATTGTTACAAGACCGAGAGAGGTAGATAAATCTCATGCCGCTCTGCACTCAGAACTTCCCTTTTCTCTCTCTCACTGTTGATGGTGGTTACTGCCCGAATTTTTGCCGTGG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF14599.9	zinc_ribbon_6	1198	1255	3.10E-23
PF05495.15	zf-CHY	1022	1097	1.00E-16
PF01814.26	Hemerythrin	41	172	1.40E-12
PF13639.9	zf-RING_2	1149	1192	3.70E-06

Gene family

Gene family	Subfamily
Ubiquitin Family	RING

Gene Ontology

GO term	Description	Category
GO:0030003	intracellular monoatomic cation homeostasis	Biological Process
GO:0051649	establishment of localization in cell	Biological Process
GO:0010039	response to iron ion	Biological Process
GO:0009267	cellular response to starvation	Biological Process
GO:0010498	proteasomal protein catabolic process	Biological Process

InterPro

InterPro term	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR037275	Zinc finger, CTCHY-type superfamily
IPR017921	Zinc finger, CTCHY-type
IPR037274	Zinc finger, CHY-type superfamily
IPR008913	Zinc finger, CHY-type
IPR039512	RCHY1, zinc-ribbon
IPR012312	Hemerythrin-like

trEMBL

trEMBL term	Description
A0A1S2YRJ5	_

SwissProt

SwissProt term	Description
BTSL2_ARATH	Zinc finger protein BRUTUS-like At1g74770

KEGG

KO	Description	Enzyme
K16276	zinc finger protein-like protein

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT1G74770	zinc ion binding
Medicago sativa L.	MsG0880046402.01.T01	_
Oryza sativa L.	LOC_Os05g47780.1	E3 ubiquitin ligase, putative, expressed
Cucumis sativus L.	Csa005374	_
Glycyrrhiza uralensis Fisch.	Glyur000204s00012391.1	_
Codonopsis lanceolata	Cl_chr02_18310T	_
Arachis hypogaea L.	AH11G22270.1	Putative RING finger protein C2F3.16 like

Expression pattern