| Gene ID | Annotation |
|---|---|
| Am01G027380.1 | plastid transcriptionally active 2 |
| Network Category | Relationship Type | |
|---|---|---|
| Global Network | Protein-Protein interaction + Coexpression Positive and Negative | |
| Top300 PCC | Coexpression Positive | Coexpression Negative |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| Am01G027380.1 | mRNA | Chr01 | 170441246 | 170449608 | + |
| CDS: |
| Protein: |
| Promoter(3k): |
| Pfam accession | Pfam name | Protein start | Protein end | E-value |
|---|---|---|---|---|
| PF13041.9 | PPR_2 | 174 | 222 | 3.60E-99 |
| PF13041.9 | PPR_2 | 231 | 257 | 3.60E-99 |
| PF13041.9 | PPR_2 | 244 | 291 | 3.60E-99 |
| PF13041.9 | PPR_2 | 314 | 359 | 3.60E-99 |
| PF13041.9 | PPR_2 | 356 | 395 | 3.60E-99 |
| PF13041.9 | PPR_2 | 384 | 431 | 3.60E-99 |
| PF13041.9 | PPR_2 | 454 | 503 | 3.60E-99 |
| PF13041.9 | PPR_2 | 524 | 573 | 3.60E-99 |
| PF01535.23 | PPR | 142 | 171 | 9.00E-88 |
| PF01535.23 | PPR | 177 | 205 | 9.00E-88 |
| PF01535.23 | PPR | 247 | 277 | 9.00E-88 |
| PF01535.23 | PPR | 318 | 347 | 9.00E-88 |
| PF01535.23 | PPR | 353 | 380 | 9.00E-88 |
| PF13812.9 | PPR_3 | 162 | 220 | 8.40E-80 |
| PF13812.9 | PPR_3 | 233 | 293 | 8.40E-80 |
| PF13812.9 | PPR_3 | 303 | 363 | 8.40E-80 |
| PF13812.9 | PPR_3 | 408 | 468 | 8.40E-80 |
| PF12854.10 | PPR_1 | 241 | 272 | 6.90E-75 |
| PF17177.7 | PPR_long | 109 | 260 | 7.90E-41 |
| PF17177.7 | PPR_long | 191 | 331 | 7.90E-41 |
| PF17177.7 | PPR_long | 403 | 517 | 7.90E-41 |
| PF17177.7 | PPR_long | 475 | 577 | 7.90E-41 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| GO term | Description | Category |
|---|---|---|
| GO:0042793 | plastid transcription | Biological Process |
| GO:0009507 | chloroplast | Cellular Component |
| GO:0003729 | mRNA binding | Molecular Function |
| GO:0045893 | positive regulation of DNA-templated transcription | Biological Process |
| GO:0004519 | endonuclease activity | Molecular Function |
| InterPro term | Description |
|---|---|
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR002625 | Smr domain |
| IPR002885 | Pentatricopeptide repeat |
| trEMBL term | Description |
|---|---|
| A0A1S2YRK5 | _ |
| SwissProt term | Description |
|---|---|
| PP124_ARATH | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Species | Gene ID | Annotation |
|---|---|---|
| Arabidopsis thaliana | AT1G74850 | plastid transcriptionally active 2 |
| Medicago sativa L. | MsG0880046382.01.T01 | _ |
| Oryza sativa L. | LOC_Os03g60910.1 | PPR repeat domain containing protein, putative, expressed |
| Cucumis sativus L. | Csa003748 | _ |
| Glycyrrhiza uralensis Fisch. | Glyur000247s00015505.1 | _ |
| Codonopsis lanceolata | Cl_chr02_18600T | _ |
| Arachis hypogaea L. | AH11G20510.1 | Pentatricopeptide repeat-containing protein At1g74850, chloroplastic like |