Gene detail

Detail information of Am01G027310.1 Annotation

Gene ID	Annotation
Am01G027310.1	DP-E2F-like 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G027310.1	mRNA	Chr01	170269441	170272926	-

Sequences

CDS:

>Am01G027310.1
ATGTCTTCCTCTGCTACTTCAGTCCCAGATCCCACCTCTGCCAGACACTACACTTATAACCGCAAGCAGAAATCTCTCGGCCTCTTATGCACCAATTTCTTGAGCTTGTACAATCGAGATAGCGTTCACTTAATTGGCCTCGATGATGCCGCCGCCAGATTAGGCGTAGAAAGAAGACGGATCTACGATATAGTCAACGTTTTAGAGAGCATAGGGGTGCTTGCAAGAAAGGCCAAGAATCAATATACATGGAAAGGATTTGGGGCAATTCCTTTGGCTTTACAGGAGCTCAAAGATGAAGGTTTAAGGGAGAATCCTAATTATCATGAAGGTGAAAGTGGCAACGAGAATGTAAAAGTTTCGGATGATGAGGATGATGAAGAAACGTTGTCAAATCCTAGCACTGGTAGTCAGAATGACAAATCAAACCCTAATTCTTCTCAACCCAGAACTCAGAAAAATGATAATCATCGAAGGGAAAAATCTCTGGCCTTGCTTACACAGAATTTCGTCAAGCTCTTTGTGTGCAACAACGTGGAAATGATCTCCCTTGATGATGCAGCAAAATATTTGCTTGGGGATGCCTATAATTCATCAACCATGAGAACAAAAGTTAGGCGTTTATATGATATTGCAAATGTGCTAACCTCAATGAACCTTATTGAGAAGACACATACATCAGATACAAGAAAACCAGCATTCAGGTGGTTGGGCTTGAAAGGGAAGACAAACAATGAGTCACATTATAATTTTAATTATAATAATTCAGATAAAAACGAGACTAGGAAAAGGGCATTTGGAGAAGATATCACAAACATCAGTTTTACAAGAAACAAATCAGATTTATTCATGTCCGGGGGCTTCAGCCAGAATCCCAAGAAGCAAAAAACAATGGAAAATGAAAGTGGTCCAAGTCATGAAGATAAGAGCAATGTAAAAGAAGGCACAAAACAGACTTCAACTAGCTATCAATTTGGTCCTTTTGCTCCAGCTTATGTGTCCAAAGTTGAGAATAATAATGTGAAGAGAGTGCATGATTGGGAGAGTCTTGCAACTGAACACTGCCCTCAGTATCAGAACCAAGCTTTGAAAGAACTATATGCTCATTACATGGAAGCATGGAAATTGTGGTACTCTGAAGTTGCTGAAAAGAGGCCAATACAAATTTTGTAA

Protein:

Promoter(3k):

>AM01G027310.1
TGGTGGGGAGAAGCAAGAAGTAATTGTTTGGTTATCTACGGGACCGAGTTTGGAGTAAGGTCAGGCAGTGGGCGGGGAGGCCCTTGTCCAAAGCAGGTAGGGAAGTTCTGGTGAAGTCCGTAGCTCAAGCAATTCCTGCATATTGCATTTGTTTGATGCAAGTGATAATCAATAGCACCCTCCTTTAATTGAACAGCTTTTCAACCACAATGACATGAGAAGGATTGTTGGGATGGTTCTTCAGTGTAGGGGAGGCGAGGATCAACTAGTGTGGAATCGTAGTAGAGACGGTTGTTATTCGGTGAAGTCAGCCTATTATGGTGCCATGATTGATCTTATTGATTCATCTAAATGTTGTATACCAGGTGATTGGAATAGTCTGTGGAAGTTGCGGATACCTCATAAGGTTAAAATACACCTCTCGCGCACTGCTCGCAGTTGCTTACCGTGTAGGTACAACTTGTGTCGCTGTCGGGTGCCATGTCCGGTGGCGTGTACTTTATGTGATGATTCAGAGGAGAGTGAGTGGCATTTGTTTTTTGGATGTCCACATAGCGTCGACTTTTGGAGAGCAGCGGGGCTTTGGAATCGGATTGAGCACATTGTTGCTGAGGCTGAGGGATATAGAGATTGCTTGTTCACGATTTTGTCTTCTTTGCAAGAGGGTCCTAGAAAGAAGTTTGCAATGATGATTTGGGCTTGGTGGGAGCGACACAACGAGAAATTATGGGAAAATGTCAATATCTCGATCCCGGTTTCTATTACTCTTGCGATGGACTTTCTTTTCCGTTGGGAGGAAGCGAAGAGGTCGAAGCAACTTCACCTCCAAGCGCAACTGAATCAACAATGAGGAGGAGCAGATGTTTGGTCGAAACCTGAGGCAAATTCTTTCAAGTGTAATGATGGTTACTACGACTTTGGTATGTGTATTCGTGACGAGCACGACGCTTTTGTAAGGGCGAGAACAATGTGGTTTACGGGTACTCCAACTCTGCAGGACGCTGAGGCCTTGGGCTTATTGGAAGCAGTCATGTGGTTACAAGAATTGGATGTCTGAAGAGTTACCATCGAGCTAGATTGCAAGGCGATTGTTGATGGAATCAGAAGAGTGTGTAATTCTGTAACTGAGTATGGCTCAATTATTTTATCGTGCCAAATGTTACTATCTAGTCTACAAAACTTCACGGTTAGTTTTATTCGGAGGCAAGCAAACCTTGTGGCTAACTCTCTAGCTAGAGTATCAAGGAATTATGCTAGCTCCCATGTTTTTGATTATAGTCCAACCTGCATTATGTCTTTGATTATGAATGAAATGCAGTGAGTTTCCTTTTGTTAAAAAAATAGTGCGGAATATGTAAGTAAGTACCTATGTGAGCGCTCAAACAACCTTGAGGCTCTTTCGGATCCCGATAAGATTTTGGAACCCAACTAGCTTAAAGTTTTTGTAAAAAAAAAATTAAGAATTTAATTTATATACACTGTCGGTATATAAGATTTTTTAGAAAGATAGCCAATTAGAAATGATACCAAATTTACGTCAACAAATAAGAAATGATACCTAATAAAAAATGTTTGACTCTATCTCAACTACCTTAAAAATAACGGATACCATGATTTTGATTGATCTACACTATATTTATACAAGGCTAAAGTGCTCCCGAGGTCCCTTATCTTTATTTAAAGTAACGAATTAGTCCTTTATGTTTTTTTTGTCCCAAATAAGTCCTTTATCTTTCAAATTTTTGACACATAAATCCTTTTCCGTTAACAGTGCTGATTTATGTGTCAAAAAAAAGGATTTATGTGTTAAAAATTTGAAACATAAAGGACTGATTTGGGACATAAAAGGATTTATGTGTCCAAAATTTAAAACATAAAGGACTGATTTGGGACAAAAAAAAGATAAAGGACCAAATCGTTACTTTAAATAAAGATAAGAGACCCCGGGAGCACTTTAGCCTTTATACAACTAAACCACATATGATTTTCCGAATACCCCCATTCTATCTAAAATACACCTCAAATTTTTTAGGGTAAAAATGTCATTACACTCTATTTCTTCTTTTATTTTCTCTTTATTCTTACACTCTCTTTCTTACTTTTCACTTTTCTCTTACCATTGATAATTATAATTTTGAAAAACTACTATAAACTTACTATCTAAAAAAACACGAGATAACTGCAATAATCTACTATAATCTACTATAACCTACTAATCAACTCAAATAATCTAATATAAAAACACGGGATAACTGGAATAATCTACTAATCAACTAAAATAATCAATTGAAACTACAAGATAACTGCACTGATATATAAACAAACAAGAGATTAATATTTGTCATTGATAATTAAAATTTTTGAAGCCTACTACTACAAACATACTATCTAAAAAATAAGCAGACTTAATGATTATTTAAATTACTAATTAATATTTAAAAAAATTATTTTTTATTGATAATCTACTATCTAACAAATTTACTATTTACTATAATCTACTATCAACTAAATAATCAATTGAAACTACGAGATAACTGCACTGATATATAAAAAACACGAAAATAACTGCAGTGATATATAAAAAAACACGGGATTAATATTGCCATGTATCAATTAATTATTAATAGATGTTTTATTATTTTATTATTTTAAAAAGCTGGCAGCCTGTATGTAGGTGGGGAGCGTGTTGATTGAGTTTAGTTATACCCGTTTCAGAGAGAGAATTCCCGCTTAATCGAAACAATTTATTTTCACTCGAAAAAAAACGCAAAACTAAATCCCTCCACTCCATCCATTCTGAAACCAAAACACGGCTTCCATTTATTTAGATTGAAAAGATTCGCCGCTACTATCCAATTTTCAAATTTCTGACCCCGCCAATTCACTTCAAACATCTCCATCTAAACCTATTTTAAATTCTTTAACAGCCCCGTCCTTTTCTCGATCACAACAACGTTATTTGTTTGTTTCTTTTGCGCTCTCTCTTCTCTTCACCCTCCC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF02319.23	E2F_TDP	22	86	7.20E-45
PF02319.23	E2F_TDP	160	238	7.20E-45

Gene family

Gene family	Subfamily
Transcription Factors Family	E2F-DP

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	Molecular Function
GO:0032876	negative regulation of DNA endoreduplication	Biological Process
GO:0042023	DNA endoreduplication	Biological Process

InterPro

InterPro term	Description
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR036390	Winged helix DNA-binding domain superfamily
IPR003316	E2F/DP family, winged-helix DNA-binding domain
IPR015633	E2F Family

trEMBL

trEMBL term	Description
A0A1S2YRL5	_

SwissProt

SwissProt term	Description
E2FE_ARATH	E2F transcription factor-like E2FE

KEGG

KO	Description	Enzyme
K09391	transcription factor E2F7/8

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT3G48160	DP-E2F-like 1
Medicago sativa L.	MsG0880046374.01.T01	_
Oryza sativa L.	LOC_Os02g50630.1	E2F family transcription factor protein, putative, expressed
Cucumis sativus L.	Csa003797	_
Glycyrrhiza uralensis Fisch.	Glyur000058s00006152.1	_
Codonopsis lanceolata	Cl_chr02_19260T	_
Arachis hypogaea L.	AH15G21400.1	E2F transcription factor-like E2FE like

Expression pattern