Gene detail

Detail information of Am01G026800.1 Annotation

Gene ID	Annotation
Am01G026800.1	myb domain protein 98

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G026800.1	mRNA	Chr01	169092352	169094440	+

Sequences

CDS:

>Am01G026800.1
ATGTTACCTTCAATTTCTGTTACTCCTCTCAACTATGCATCATCACAGCCAATACATTTGAGAGAAAATTACCTAAAACCAAAGATGAAAGACCATGAGCTTATTCCTTTTGGGGTTCCTTCTAATTCTCAAGGTTTCTTACAAGACTTTCACCACATTGAGCAGTTTCATGATCATGTGCATGGCTCATCATCATCCAACACAGTTTTTGGGGTCCAAACTCAAACTTTTGATCCTTTTGATAATGCTAACTGTGAATGTGCACCAGCTGCAGGTTATGAAGTTTATGAAGACAAGCCTTTTGATGGCAATGAACATGCTCACATTATTGATAATTTTCAATATGATGGTTATAGTTTGAATCTTCCTAGGAGGAATCAACTTGATCATATGATGGTTGAAAATCAAAGTTATTTGCCATTGAATTATGTTGTACCAGATGAAGTCTCAAGCATAACCCCATCAGATTATTATCAGAGATCAGTTGACTTCAATAAAAACAATAGGGAATCTCCAACATCCAGAAGAGCATTTAAAGTGAAGAAGAGGTCCAATATAATCAAAGGACAATGGACAGTTGATGAAGATAGATTGTTGATTCAACTGGTGGAACAATATGGAATGAGGAAGTGGTCTCATATTGCTCAGAAGTTGCCTGGAAGAATAGGGAAACAATGCAGAGAAAGATGGCATAACCATTTAAGGCCTGACATTAAGAAGGACATATGGACTGATGAAGAGGATAAGATACTGATTCAAGCTCATGGAGAGATAGGAAATAAGTGGGCAGAAATTGCGAAAAGATTGCCAGGTAGAACTGAGAACTCAATAAAAAATCATTGGAATGCAACAAAGAGAAGACAATATTCCAAAAGAAAGTGTCGCTCAAAGTACCCTAGAGGCACACTTTTACAGGAATACATAAAAAGCTTGAATTTGGACCAAAACCCACCAAGAGACTTTCGAAAAAAATCTAACAATGCTAATAGCAAGAAAACCAATATCAGCACAAGCAAATCAGTAGCACTAGTAGCAGCACCAACTCAGCCTCAGATTGCTAACCAGCTTTGTTCCAATAATGATCGTGTGGTGCCAAATTATGATCAATTTAATGAGGTCTCAAATTTTTGCTTAGATGATAATTTGTTTGAACAAGGGTGTGGTATTGATTCTTTGCTAGATGATATGCCTAGTGTTCCTAATGAGAAAGATTTTGATGATAAGGGAGACATGCAAGTTGTTAATCTTGATGAGATTGAGGATCACTTTGAGACAGAGAATATGATGGCATCCAAAATGGAGATTCATGAAGTTAAGAAAGAATTGGATTTGGTGGAGTTGATCTCTCAGGTTAATGAAAATATTGATGTGTAA

Protein:

Promoter(3k):

>AM01G026800.1
GCTGCTCAATCTTGCACAACAACACTCCAACTGAAATGCTATACCTCATACCACTCCTAGAGCTCTATTAGAACCACATGCAAGCTAGGAACTCATCTTTTCTCCAAAATGGAGCTTGGGTTCGAAAATGGTGTTTTAAGAAGGGTGGAGAAGTAGGTAATGAAACTAGTATCAGTAGGTAGAGGAGAAGAAATGGAAATGAATGGTGAAGAAAAACTGGACATGCATCAAGAGATGAAGCTTGGCTTCCCTCTCACTCTCGTGTCTCCCTTCTCTCTCTCTCTAGCTCTCAATCTCTGATTTTCAGCAACTGTGTTTTTGGTTGTGAGTGTGTGTTGTGTTTTGAATTAATGAGCTGAGGGTGTTTTTAAAGGGGAAAACCAAACTACCCTTCAGTTATGTTACTCACTTAAAACTCCATTTAATTCAACAATCAATCAATAATTCTCATAACTATTATAATTTAGCAACCAAGCACACCATGAATCATTTAATCAATGACAAACTACCCCATAATAATTAAATTATGCGAATTAATTAAACAAAACACTTTCTAATTTTGAGTAACGAAATTAGACAAATTGGGGATGTTACACCTCCTCTCTATTGCAGCTATCCGACGTTGGCCTGTATTTCAACTTGACATTAAAAATGTCTTTTTGCATGGTGACCTTGAAGAGGAAGTGTATATGGAGCAACCACCAGGATTTGTTGCTCATGGGGAGTCCTCAAACATGGTTTGTCGATTTCACAGATCACTTTATGGTCTTAAACAATCTCCAAGAACCTGGTTCGGTAGATTCAGCACTGTGGTACAACAGTTTGGTATGACTCGTAGTGAAGCTGACCACTCTGTATTCTATCATCATTCAGTCCATGAATGCATTTATCTGTTACTTCTTGGGTATCGAAGTAGCCCAATCCAAGGATGGTTTAGTAATTCCACAAAGGAAATATGCCATGGATATTCTTGAAGAGACGGGTTTATTGAATGCCAAACATGTTAACACTCCTATGGATCCAAATGTAAAACTTCTACTTGATCAAGGGGAGCCACTTTCAAATCCTGGGAGATATGTTAGATGGGTTGGAAAGTTAAATTACCTGACTACCACTCGTCCGGATATTTCCTTTGCAGTCAGTGTAGTAAGCTAATTTTTAAATTCCCCTTGTCAAGATCATTGGAACACTGTAATTCGAATTCTAAAGTATGTTAAACGTGCTCCGGGGAAAGGTTTCATTTATGAAGATAGAGGGCACACTCAGATAGTTGGTTACTCAGAAGCCGATTGGGCAGGCTCACCCATTGATAGACGATCCACTTCTGGGTATTGTGTACTAGTTGGAGGGAATCTGATATCCTAGAAGAGCAAGAAGCAAAATGTTGTTGCAAGATTCACTGATGAAGCTTCACTTTCAAGATACTGCACAAATGACTCTAGTCTGTGACAATCAAGCAGCATTGCATATTGCCTCTAATCCAGTTTTTCATGAGAGGACTAAACATATTGAAGTAGATTGTCACTTCATCCGAGAGAAGATTGAGTCAGGAGACGACATCACCACAAGTTTCTTCAAGTCAAACGACCAATTGGCAGATGTCTTCACTAGATCTCTAAGAGGTCCTCGAATAAGCTACATATGTAACAAGCTCGGTGCATATGACCTATATGCTCCAGCTTGAGGGGGAGTGTTGATTATTTCCATATTCATTGTACATTTTCATGTTCCTATGCATATTATTTATTACACTTAGATTATACATCTTCCTAGGCTAGCTATTACTATTCTTTGTCTTTACAACTTCATAGGTAATCAATATAATTATTGTATAAACACTACTACTCCGTTATAGAATATACGCACAAACTGGTCAACAGAAGTTGATGTATCTGGTCCAAATTTTGAACCAGATACATCAACTTCTGTTTACCAGTTTTTACTTATATTCTGTAACGGAGGGAGTATATATAGAGGGTGTGTGATCTTGATTGACACACAGTATTCATTCAACATATGTCTCTCTTTTCTCTCTTTCAACAAACAATTAACTAGGTATTTTTTGGATAAAATAATGACCTAATGAAAAATATAAATATATTTATAATACTTCTTGTATACCTATCTCATGAATTTGAATAAAAAAATTAGACAAACATAATAATATAATTTGAGAATTATCTAATGATATAATTAATGTTAAACAAGTTGCACCAACCAATAAACAAAAAATATTGCTGTAAAAACATAAAATGCATAACAAAGATATATTAAAATTATAATTAAAATATATAAACCAAACAAGTCGAGTTATACCTAGCTCAAGTTCAGCTCATTTATTTAACGAGCTCAATTTTCCAGCTAAAGTTCAACTCATTTGGTTCATGAACCGAGTTCAACGAGCTATTTATCGAGTCGAGTTTCAAACTTTGTTTGAATTGGTTCGGTTCATTGCCAACCCTACCCAGTGATATAAGCTACCCTAGGACACGGGAGTCGATCCGGTCCTCTCGGGTTCTATTCCCGTAGTAGACAAATTCGGTGTTGGTCAGTGCGAAATTTTCTCCTAAACACGAACGGGGATTAGTCTTTCGTTGAAAGCGATGGAACACTCTACGAGAGCCAACAATAGTCCGAATAAAAAAAATCAAATTAACGTGGACTTGTGGGATTCACAGACTACTGCATCCTCATAGCACTGCATAAAATCTACTCACAGGGGAATATTTGACCATAGTCTTATCTTAGTAATTAATAATGGTTAACTAAGCAAATTTGATAACGCCAATGTTATAATGAAACTGTAACTATTAATCAATTAATCTTAATTAATGTCAGTTACCAACATAGAAAAATAAAAGAAAATCTTATTAAAATCTAAACCTTATAGTCAAGTTTCTTGAGGGGGAGCAATCTTGACCATTTGATGCTTTCATGTTAATTAATGAATGCATTCTCACTCTCTCTTATAAGACACAATTGAGTTGCCTTAAAACACAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00249.34	Myb_DNA-binding	188	234	2.80E-34
PF00249.34	Myb_DNA-binding	243	282	2.80E-34
PF13921.9	Myb_DNA-bind_6	191	240	1.20E-26
PF13921.9	Myb_DNA-bind_6	243	294	1.20E-26

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Gene Ontology

GO term	Description	Category
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	Molecular Function
GO:0045691	regulation of embryo sac central cell differentiation	Biological Process
GO:0045697	regulation of synergid differentiation	Biological Process
GO:0010183	pollen tube guidance	Biological Process
GO:0009553	embryo sac development	Biological Process

InterPro

InterPro term	Description
IPR001005	SANT/Myb domain
IPR017930	Myb domain
IPR009057	Homeobox-like domain superfamily

trEMBL

trEMBL term	Description
A0A2K3PM89	_

SwissProt

SwissProt term	Description
MYB98_ARATH	Transcription factor MYB98

KEGG

KO	Description	Enzyme
K09422	transcription factor MYB, plant

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G18770	myb domain protein 98
Medicago sativa L.	MsG0880046326.01.T01	_
Oryza sativa L.	LOC_Os06g06740.1	MYB family transcription factor, putative, expressed
Cucumis sativus L.	Csa005208	_
Glycyrrhiza uralensis Fisch.	Glyur000198s00008741.1	_
Codonopsis lanceolata	Cl_chr02_11430T	_
Arachis hypogaea L.	AH20G00350.1	Transcription factor MYB98 like

Expression pattern