Gene detail

Detail information of Am01G025530.1 Annotation

Gene ID	Annotation
Am01G025530.1	Integrase-type DNA-binding superfamily protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G025530.1	mRNA	Chr01	164398495	164399352	-

Sequences

CDS:

Protein:

Promoter(3k):

>AM01G025530.1
AGCATCATATATATGCATTATCTGTTTGAACTAACCTCCCACCTTGAGATGAGTAAATGTTTTGTCATCATCAAAAAGGGGGAGAATGTAGATATCTTGTGTTGCAGGCTAAGTTTTGATGATGAAGTGGTTAAGAGGTTTTGATGATGAAAAAGACAAAAGCTAAAGTTGATAATAGTAAAAAGGCCAAAGCCAAAGTTGATGGCCAAAGTTAATGAAAGTGACAAAGTATCAAAGTCACAATCCAAGACAATCAAGCTCAAGAATTGAAGTTTCAAGATATAAGGGTAGTCCTTATAAATAAGGGTAGTCCTTAGGGTTTGGGTGTGTCTTAGGAAAAAGTGTAAGCTCTTTCGAAGGTCAGCTCATCTCTCAAAGTCCCATGATTTTCAAAATGCATGCATGCACACGTAAACACAAGAAGCATTTTTGAAAAGCATAAAATCGATTTTCTCTATTTTATTCTATATATAAAAATCGATTTTCAGGTCAATACAAAAGCTAAAGAATCGATTCATACTAGTTTCACTAAGTATGCAAATCGATTCCTAAGTATTTCTAAAAAGGAAGAATCGACTCATACTATTTTATACTAAGCATAAAAATCGATTCTCAAGTGTCTTTAAAAGGAAAGAATCGATTCATATTATTTTTACCAAAGTGCATAATCGATTCACAAGTATTTTTCAAAAAGGAAAGAATCGATTCACACTATTTTTCACTTAGCAAAAGAATCGATTCCTACATGTCTCAGGCAAGCCAAGAATCGATTCATACAAATTACATTGAGTATAAGAATCGATTCCTAGCCTTCCTAGATCTCAAGAATCGATTGTTACTCTTTCTCAAGTAAAGCAAAATCGATTCTCACTTAAAAGAAGTCATACATAAGAATCGATTCCTAGATCCAATGTTTTCAACAAAGAATCGATTCCTACATTATTTTCAACGTAAACTTGATTTTCTCATAGCCTATAAATAGAGGCCTCATAGCCTCCATTTCTTACCAACCCATTTCACGATCTATAACTTCTGAAAAACTCTTTATATTTTATTTGTGTTCTTCTCGCACCGCTGGTCCGTCAAGAACTGATCTGTTGCTAAGAGTTAGTTGGGGTTGCATTCTTCAAGTTGTAATATCTGCCTTCATTAGAGGTATTTCTGTCTTTACAATTGCTTATTATTTAATTGTTGTGTTTTGTTCTAGGGAGTGGGGTATCTCTCTAGGGTAGCTGTTTGTACTAGGAAGTGGGGTATCTTTCTGGGGCAGCTGATTGTAACAGGGGTGGGGTATCTCTTGTTATTGTTATATTAGATTTGAGGGCTCTCCATAGGTGGGGTATCCTAGGAGGAGAGTGCCTGAGTCTGTAAAGGTTTTCCAAGGCACCTGTAAGCCTTGTTGGTTTGGTTAGTGGAAAATCTCACAAGGGTGTGAGGACTGGACGTAGGTCACTAGGAGGTGACCGAACCAAGATAAATCTCTGCGTGCTTTACTGCTTTCCTGCTTTACTGCTTTATATTCTAATTCCTTCGCTTCCACTTAACCTGCGCGAAAATTGATCTAAGTCATTGAAAAGGGGAAAAACGTTTTCGAAAGATCTGAAAAGTTTTAAATCTCAATTCACCCCCCCTCTTGAGACTGAAGCCACTTGGTAACATTTAAGAACTGTGGTAACAGTGTTAGACAAACGGAATATGCGAGCATCATTGGCAGCCTAAGGTATGCCACTGATTGTACTAGACTCGACATTGCCTATATCGTGGGATTGCTGTGCAGGTTTACTAGTCGACCTAGTATAGAACATTGGCACGCTATTGAGAGAGTCATGTGATACCTTAAAAGGACCACGAATCTCGGATCACATTGTCAGAGATTTCGAGCTGTACTTGAAGGATACACTAATACGGATTGGAATACTCTATCAGATGATTCCAAAGTAACTAGTGACTATATATTTAGTATATATGGTGGTATTGTCTCCTGAAAATCCACGAAATAGATCATTTTGGTTCAGTCCACTATCGAGTCTGAAATGATAGCGTTGGCAGCCGCCAATGAAGAAGCTAGTTGGTTGAGATGCTTACTAGCAGAGATTCCTTACGGGAAAATCGACGCCAGTTGTGTTGATCCACTGTGATGGTACCGCGGCTATTGCAAAATAAAGAATCGTTATTACAACGATAAAAGTCGACAAATACGTCGTAGGAACAGCATTGTTAGAGAAATTCTCTCAAAAGGAGCTGTGAGAGTGGATCATGTACGCACTGATTAGAATTTAGGTGATCCTTTGACGAAAGGATTAGCCAAAAAGAAAGTCCAAAACACATCTCAAAAGATGAGACTACTGCCATTAGAACCATGAGTCACTCACGATGGTAACCCGACCTAAAAGACTGGAGATCCCAAGAATTAGGTTCAATGGGTAATAACAAGTTCTGAAGTGATAGGAGATGAACATGCCACTATAAGTAAATAAGCATAATTGCTGAAGCGATGTAAGGTTGAGGTAGTCGAAACTCTTAATGAGATCTATACGCTATGTGGAGTGGAGTACCTAGCTACAGGAGTACTCTTGATAGACTCACCTTTGTGAATGTGGAAGTGGGGCCGCTTCCTATGGAATTCTTGGCAGAAATTCATAGAGCGTTCACTAAACTCGGATAGACGTGCAGGGCCATAAAAGCTAATTATTTCCAAAACCTTATACATTGAATTTGTGATTGACATTATACATTGAAACGCTAATTATTTCCAAAACCTTTAATTGCATGCAGTTGGAACACAAGTACACAACCAAGCGCCACCATTTCATTTGTTAATTTGTTGTACGAACAACATCGGCACTCAGTTACTCCGCGACATCGCCACGGTTTCACTTTAATTGCATAATAGTAGTGTACTATCTTGCATTATATCTACTCTTAAAATCTCCATGCATTTCCCAACAAGACAGTCATCTTCAATTCCATCATTCTTACATACACACCAAACATTCTCTC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00847.23	AP2	14	63	5.10E-12

Gene family

Gene family	Subfamily
Transcription Factors Family	AP2

Gene Ontology

GO term	Description	Category
GO:0006355	regulation of DNA-templated transcription	Biological Process
GO:0003677	DNA binding	Molecular Function
GO:0001067	transcription regulatory region nucleic acid binding	Molecular Function
GO:0019760	glucosinolate metabolic process	Biological Process
GO:0006952	defense response	Biological Process

InterPro

InterPro term	Description
IPR016177	DNA-binding domain superfamily
IPR045277	Dehydration-responsive element-binding protein 1A-I
IPR036955	AP2/ERF domain superfamily
IPR001471	AP2/ERF domain

trEMBL

trEMBL term	Description
A0A445KKE3	_

SwissProt

SwissProt term	Description
ERF24_ARATH	Ethylene-responsive transcription factor ERF024

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G36450	Integrase-type DNA-binding superfamily protein
Medicago sativa L.	MsG0880046205.01.T01	_
Oryza sativa L.	LOC_Os02g45420.1	AP2 domain containing protein, expressed
Cucumis sativus L.	Csa012869	_
Glycyrrhiza uralensis Fisch.	Glyur000175s00012069.1	_
Codonopsis lanceolata	Cl_chr02_39940T	_
Arachis hypogaea L.	AH05G08280.1	Dehydration-responsive element-binding protein 1B like

Expression pattern