Detail information of Am01G025460.1 Annotation
Gene IDAnnotation
Am01G025460.1 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G025460.1mRNAChr01164105043164110248-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF08540.13HMG_CoA_synt_C1754497.00E-110
PF01154.20HMG_CoA_synt_N21741.40E-83
Gene family
Gene familySubfamily
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Gene Ontology
GO termDescriptionCategory
GO:0004421hydroxymethylglutaryl-CoA synthase activityMolecular Function
GO:0010142farnesyl diphosphate biosynthetic process, mevalonate pathwayBiological Process
GO:0016126sterol biosynthetic processBiological Process
GO:0006084acetyl-CoA metabolic processBiological Process

InterPro
InterPro termDescription
IPR016039Thiolase-like
IPR013528Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
IPR013746Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain
IPR000590Hydroxymethylglutaryl-coenzyme A synthase, active site
IPR010122Hydroxymethylglutaryl-CoA synthase, eukaryotic

trEMBL
trEMBL termDescription
A0A075EBV0 _

SwissProt
SwissProt termDescription
HMCS_ARATHHydroxymethylglutaryl-CoA synthase

KEGG
KODescriptionEnzyme
K01641hydroxymethylglutaryl-CoA synthase[EC: 2.3.3.10]

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G11820 hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Medicago sativa L.MsG0580024431.01.T01 _
Oryza sativa L.LOC_Os08g43170.1hydroxymethylglutaryl-CoA synthase, putative, expressed
Cucumis sativus L.Csa017997 _
Glycyrrhiza uralensis Fisch.Glyur000175s00012062.1 _
Codonopsis lanceolataCl_chr02_42500T _
Arachis hypogaea L.AH05G08350.1Hydroxymethylglutaryl-CoA synthase like

Expression pattern