Gene detail

Detail information of Am01G025300.1 Annotation

Gene ID	Annotation
Am01G025300.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G025300.1	mRNA	Chr01	163686445	163689562	-

Sequences

CDS:

>Am01G025300.1
ATGAATTTCCTTCATTACCTCTTTCATATTTTTCTATTGGTTGTTGCACTTTTCATTCCTCAGGTGGTTCTTGGAAATGCAGAGCTCAGAGCTCTGATGAATTTGAAATCCTCTCTGGACCCAGAAAACATGCTCCTTCAGTCATGGACAAATGATGGTGATCCATGTAGTGGTTTCTTCTTAGGGGTTGCATGTAACGAGCACCAAAAAGTAGCCAATATATCATTGCCAGGTAGAGGCCTCTCTGGAAAGCTCTCTCCAATGGTTGCTGAACTCAAATGCTTATCTGGTTTATACCTGCATTACAATCATCTCCGTGGAGAAATACCAACAGAAATTTCAAATCTCAATGAATTGGTTGATCTTTATCTTGATTTCAATAATCTTTCTGGAAGCATTCCTCAAGATATTGGGAACCTCTCTAGCCTCCAAGTGTTGCAATTAGGCTATAACCAATTAGAGGGGGAAATACCTCAGCAAATGGGTGAGTTGAAGCAGCTTAATGCTCTTGCTTTGCAACATAACAAATTAACTGGTCAAATTCCTCTAAGCTTGGGGAATTTGGAGATGCTAAAGAGACTAAATCTGAGCTTTAACAACTTCAATGGTGTGATTCCTAAAACAATAGCTCATATAGCAAATTTGGAAGTTCTAGATGTTCAGAACAATTCTCTTTCAGGAATTATTCCTCCTGAATTGAATAGATTAAGGGAAGGATTTCAAGGTGCAAACAATCGAGGTCTATGTGGAGTTGGGTTTTCTACTTTGAAGTCTTGCCAATATTATGTTAGCCAAATTGATACCTCAAATAATGTATCCATAAACATTAATCCTCCAATTGAAATCCCAGAAGCAGCAAATACCAAAATTCACTGTAACCATACACAATGCTCAAAATCAAGAAGGTTTCATCATATTGTCATTGCAGCAAGTGTTGCAACTATCACTATCACATTGATAGCTGCTGGATTATTCATATTTGTCGTATATCGCCGCCGAAGGCAGAAGATTAGGAATACATCAGACCCTTCTGAAGGCCAACTTAGTCCTTACCAGCCTAAAAAATTTCACAGTAGAAGTGCATCTCCACTTGTTAATCTTGAGTATTATCATAATGGATGGGGTTCATTGGCTGATGGTCAAAACATCAGTGGATTCTCCCATGAATATTTAAACCATTTCAGGTTTAATGTTGATGAGGTTGAATCAGCAACACAGTACTTTTCTGAGGCCAATTTATTGGGTAGAAGCAAATTCTTAGCAGTCTATAAAGGAGTTTTGAGAGATGGTTCTATTGTGGCTATTAGAAGCATTAGTGGAACATGCTGCAAAACTGAGGAAGCTGAATTTGTAGAAGGGTTGAGCTTATTAACCTCATTGAAACATGAGAACATTGTTAAGATTAGAGGTTTTTGTTGTTCAAGGAGTAGAGGTGAATGCTTTCTTATCTATGACTTTGCCACTAGGGGTAACCTGTCTCAATATCTTGATAAGGAAGATGGAAGTGACCATGTGCTTGAGTGGTCCAAAAGGGTTTCTATCATCAGAGGCATTGCAAATGGTATTGGATATCTACACAGCAATATAGCAAACAAACCTACAATAGTACATCAAAATATTTCAGTTGAAAAAGTCATTCTTGACCATCAATTTAACCCATTGATCATGGATGCTGGCCTCCCTAAGCTTCTAGCAGATGATGTTGTTTTCTCAGTTCTGAAAGTAAGTGCTGCAATGGGTTACCTAGCTCCTGAATACATTACTACTGGACGATTCACTGAGAAGAGTGACATGTATGCATTTGGAGTCATTGTTCTTCAAATTCTATCTGGGAAAACAGTAATAGGGGGGTCAATTCGGAAGGCATTTGAATGTTTTAGATATGAAGATTTTGTAGATACAACGTTAAAGGGTGTATATTCTAAATCTGAAGCAGAAGTTCTTTCAAATGTTGCAATGTTGTGCACGGATGACCTTCCTGAGAAAAGACCAACCATTAGGGAGGTGATTCAAGAGCTGAGCATGTGTCCTGCTCACTCTTTATGA

Protein:

Promoter(3k):

>AM01G025300.1
TTATTTAATTCAATTAAAACAATTAAAACAATTAATTCAATTAAAACAATTAAAAAATAAAACATAAACCCCCCCACCGTCCACCACCACCCACCACCCTCAACCACCACCCACAACCGTCAACCACCACGATACACCTCAAAATCAACATTCAACCCCCAAATCTGAAAATCAACATTCAACCCCCAAATCAACAACATTCAACCCCTTTTCGTCAACCCCCAACAACAAATCTGAATCCCATATTTTGAAATCAAAAACGAAAATCAAAGACGCGTTTCTGGGTTTCGATTTCGTTTTATTGTGATTTTGATTTTGTGAATCTGAAGAAGAAGAAGAAGATGAATTTGTGAATCTGAACGAAACCCATTTCTGAATCTGAACGAAATTGTCTAGTTTGAAGAAGAAGAGAAATTTGTGAATCTAAAGAAGAAGAGGAATTTGTGTGTCTGATTGGAGAAGAAGATTGAAAAAAAATACAGATCCAGAAAATATTGAAAAAATACAGATCTGGTTGTTGTTGTTGAAAGATGGGAGCGAATGGTTGTTGTTGAATCAGACACACAAAACTGACGATGTGGAATTAATGTTGTTGTTGTTGTTAAATAACATGATGATGTTGTTGTTGAATCCAAACACACAAAACTGACGATGTTGTTGTTGAATCCAGAAATTAATGTTGATGTTGTTGTTGAATCCAGAAATTAATGAATTACTACTAAATAAAATGTTGATTTTCGTTTTATGCAACATTTTCAGCGCACCAATTGTTTTAAAATAATTTTGTTTTAATTGTTTTAATGTTTTAATTGAATTAAATAATAACGTGAGGGACCAAAATGAAACGAAAATGAAACATAAAGGACTAAAACAGACCAAAAAAAAGATAAATGACCAAAGTGAAACGAAAATGAAAGATAAAGAACCAAAACGGACCAAAAAAAAAGATAAAGAACCAAAGTGAAATCTGGAGCAAAGATAAAGGACCAAAAGTGCTATTTAGCCTATTTTTTATGTTAGGTAATAAATATAAAAAATATGTTGACAATTATATTTAACTACAGCTACAAGATTGGGTCTTTAAAACTCTAAAGTTGGGGTCCTGGGGACTGGGAGTTACTCCGTATTTAGAAATCAATTTGAATTTTCTGTGTTAGTTGTGTTTGGATTGTAGTCTCAATTCTTAATCATATCGAGAATTGTGGCGAGATTACGAGTGGTGGCACGACTTGTTTAGTCGCAACTACTGTGTATGTCTATTTCAGCATAAACAGACAAAAAAACAAAAGGAAAGATCGCTATTACTCTTTTTCTTACCATTAGCAAAAGTTTTTCTATAAGCAAGCATATTGATAGATCATGCAGAAATGGTGTTTGGTAAAGCGGACAACATTGAAATTGAAAAGCATTATCATACATGACCAATACCGCGTCCCCAAGACTTTTCGCAGTTCAAACTTCAAAGTATCACTGGTGTCCGATGTGAGAAAACTAAAAAAATTTATAGGAAAAGAAACTAAAAAGTATAATGAATTATGTTATTAAATTTAAAAATATAGAAGAAAATAAGTGTGAGAAAAGCGACATTGAAAAATTTAGTGATCTCAAAGTACTAATTTCTAAAGGGCCATCATTTGAGACTTTGAGTTGAGGTTCAGTGATCTACATCTAAATGCTGGTCCTTTTTCACACACATCATCCCCTATGCTTCTCTTGCCGGTCTTAGGAAGTGTTCCGAACTGGGCCGAAGCCCAACATTGTCATAGGGCCGGCCGCAAGCGGCCCAATTAGCGAAGCAGAGAGGCTTGACCTAGATCGCAGGATCAACGACCCAGATCAAGCCATATGCGATCCGACGGTCGCCCACAGAGCCTCTGACACTATATATAGAGGTCTGACCTCAGCTGACAGGTACGCTTTTGGCACATAACGTTACTCTGCTCGAATATTACCCCACTGACTTGGGCGTCGGAGTGTCATCGCAGGTACACCCTGCCGGAGCTCTGAACACGACCAACAACTATTCAGCTCGACTTCACCACCACCTTCGCTCAAGCAACAAGCGACCTCAACGAGCCAGTAACGTGACCAAGCAAACCAAATCAAATTGATCGCCCACATTGGGGCCCGGATCAGGAAGGTAGCTCAGTTGGCGAGCTAAGAGACATAAAGGAGTTGCAAAGTTGTAAGAAGGAGGTCCAGAGTTCAAACCCCCAGAAAGAAACATTCTCCCACCCCCACTAACATTTGCTTATAAAAAAAACGTCAATCATTTTTCTTACAGCTCCAAAAACTTTTTCAAGGCCTTCTTATCAATTAATTTGTCGTAATCTTAATATTTTATTCTCAAATCAAAATCAATTAAGGCCTTAGGCCTCCTTTATTTTGAGAATCCAAGATCAGGGAAATTGTTTACACTGTGAAGAGAATCCAAAGACCAAAGACCAAAGATGAAGAAACAGTAATGCAAGAGAAGTTGAAAACATACATAATTACCAATCTTACTAGGAGAACACACTAATACACTATAGCATTACAAAATTGATAAGTTGAAAACCACGTATTCAAACTAAGGTGGTCCACTCCACAGCAACCATATTTATTATTCCTTTAATTTATCATTGTATAGAAAATATTTTTTGAAACCAATGGCAACTATACCAGCCGACTACATTCTCCCCTAGGAGATGCAATGTGAACCAACCTTGTTAGTCAGCAACTCATAAAGTTATTAATCAACTTTGCTAGTTGCTACCCATTAGAAAATGCTTCTCCTCCTTATTCCCTTCTACATACATCCTCTATGCAGAAACTCATAACATCAATTTTCAATATATTACAAAAATCCACACATAACTGAAACCAACAAAGTCAACGTGAGTGGTGACCATTGACCAACAACGTTCAAAACCAACACAGTTAGAATTTTTTTTACAAAAGCTCAAATGGGTGCCTCTATTTCATCTTAGTTTTACAGAGTTTCCCCTTCAGAATCGGAAG

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF07714.20	PK_Tyr_Ser-Thr	412	673	9.50E-34
PF00069.28	Pkinase	410	671	5.30E-25
PF08263.15	LRRNT_2	26	66	9.30E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.13.2:RLK-Pelle_LRR-IV

Gene Ontology

GO term	Description	Category
GO:0004672	protein kinase activity	Molecular Function
GO:0016020	membrane	Cellular Component
GO:0071944	cell periphery	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0033612	receptor serine/threonine kinase binding	Molecular Function

InterPro

InterPro term	Description
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0AAN9LCC8	_

SwissProt

SwissProt term	Description
GSO1_ARATH	LRR receptor-like serine/threonine-protein kinase GSO1

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G22730	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0580024477.01.T01	_
Oryza sativa L.	LOC_Os06g04370.1	expressed protein
Cucumis sativus L.	Csa018032	_
Glycyrrhiza uralensis Fisch.	Glyur000175s00012028.1	_
Codonopsis lanceolata	Cl_chr02_41410T	_
Arachis hypogaea L.	AH01G16210.1	Probable LRR receptor-like serine/threonine-protein kinase IRK like

Expression pattern