Gene detail

Detail information of Am01G024810.1 Annotation

Gene ID	Annotation
Am01G024810.1	Lactate/malate dehydrogenase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G024810.1	mRNA	Chr01	160989439	160990845	+

Sequences

CDS:

>Am01G024810.1
ATGCACAAGAGCGGTTCAGGTTCAACATTGGGCCCCGGAGGCCTGGACTTAGCCCAAGCCTTCTTCAAGCCCATACAAAACGCGGCCCCTCCCTCTCCCACCAAACGCCACAACAAGATCTCCGTCATCGGCGCCGGAAATGTCGGAATGGCGATTGCCCAAACCATCCTCACTCAAGACCTCACAGACGAGCTCGTTATCGTCGACAACAAGCCCGATAAGCTTCGCGGCGAGATGCTCGATCTCCAACACGCCGCCGCCTTCCTCCCCCGCGTAACGATCAACGCCTCTGTAGACTACTCTGTCACTGTCGGCTCCGATCTCTGCATCGTCACCGCCGGCGCACGCCAGATCGCCGGCGAGTCCAGGCTTAACCTTCTTCAAAGAAACGTCTCCCTCTTCCAGAACATCATACCCCCTCTCGCCCGTCATTCGCCGGACTCCGTTCTCCTCATCGTTTCGAACCCCGTCGACGTCCTCACCTACATTGCCTGGAAACTCTCTGGGTTCCCTTCTAATCGGGTCATCGGATCGGGTACTAACTTGGACTCATCTCGCTTCCGTTTCCTCATCGCTGATCATCTCAACGTCAACGCCCAGGACGTTCAGGCTTGCATTGTAGGGGAGCACGGGGATAGTTCAGTGGCATTATGGTCTAGCATAAGCGTTGGTGGGGTTCCTGTGCTGAGTTTTTTAGAGAAACAGCAGATTGATTATGAGAAAGAAACGCTGGAGAATATACACAAGAGTGTGATAGGCAGTGCTTATGAAGTAATCAGTCTGAAAGGCTACACTTCATGGGCCATTGGGTATTCAGTGGCTAGTTTGGCCCGGTCCATTATTAGGGACCAGAGGAAGATTCACCCTGTGTCTGTTCTTGCGAAGGGGTTTTATGGTATAGGTGATGTTGAAGTGTTTTTGAGCTTGCCAGCTCAGCTTGGTAGAGGTGGAGTGCTAGGTGTAACCAATGTGCACATGAATGAAGAGGAGGAGCAGAGGCTTAGGGACTCAGCCAAAACCATCTTGGAGGTCCAGACTCAGTTGGGGATTTGA

Protein:

Promoter(3k):

>AM01G024810.1
TTCATATATGATTATCCCTGTTAATAAGGTTTCCAACGCACCAAAGAACACCTCAATCGGACTCCCGGATCAAAAGTTATCGCGAAAACAAAATCAATAGGGTTTGCTGAAAAATTACACTGCGTCGCGACGCGAACAGGTTCCGTCGCGACGCGAAGAGTTACAGAACCAAAACCTTCGCAAAATTAAACATGTTCGCGTGGCGACGGCCACGGGTCGCGACGCGACCGTTGGCAGAAGTGTTCAAAAATGACTTTTCAAAATTCCGTTTTGTTTCGTTTCGCTTTCAATCCGGTGCCGAGACATTTTAGGACTTCCGTGACTTAAAAACAAACATTTCAACCAGCAATTCAGTCATATTCTAGCAAAAGCATTAAAATAAATCAAATTAATAAAACATATATATTCACCGAAAAACCGTAAAAACGCCATTTTCCCGAAAACGGTTTTTGACTCGATTCTTTTCAAAACGAAACGCGAGACATAATCATTCAGAGACATAAAACTCAGTAACACAAAACATCCCTAAGCGAGTATAGAACTCACCGTTTTGACGATCTCGCGAGAAATCACGTCCTCACACGAAACGACCGAACCATAGCCTCTCGAACGATCCCCGTAATCACGTACTCGCACCGAACTCGTCCGATACTCGAAACTGAACTTCGGAACAGCAACCAAACACAAATCCCAGCTACTAAGTTCCCTTCCTGTCTACAGAATTGATGTCTCTCGAACTTTGACGACTCGGACCGAAACTTGACGAACTGACATTCCCAGCTCCACACCCGTTTTCCAGCATCAGTGTACAGATTTTCAACACGTCTATCTAGGTCAATTCGTAGCCAAAATCCCTCAAACCAGTGCCCATTGTGTAGATAATTTTGTCTAGTTTCATATGGTTCAAGTTTCAAACGAATTCACCCAGTATCCAGAGAGTTATCATGAAAACAAGGGGATTGGGTTAAAACTGACTCTAATTCAAAACTGAAACTTGTAATTCATTTTTCTCCCACCATACTCAATGAAATCCGTTAATTATTGTGCCTAATTTGAAGAATTTCTTGTGTAGTTTCTGAATCATCAAGAAACACGTTCATCTGAGCCGTGTACAGAGAGATATAAGGTGAACACCGAAGGTGGTGCAAACGGGTTTCCCACTGGATTTGTTTCTTTTTGGTGAACTTGTTGTATCTTCAACTCCAACTTAGAATTTCATCTCCAACAACTACCCAAACAAACTATATTCTGGTTCCAGCAGCTACAACCTCTTAAATGTGTTTCAATCTATAATGTTGTTGTCCTAACACTTGAACATTACTCTAGACTCAACATGCAAGAGTTACAAATCACAACTCTTCCAAGACTCCACTTTTCTTCAATTTGAGCATGGATTTTCAGAAATGGTGAAATGGAGAAAAGGATGAATGAGCTTATGAAATTGGTATCATTGGATAGAGAAGGAAAAATGGAGAAGATTGATATATGGGATGCTTACATGCAATGGGTGATGGTGGAGCTTTGAGTCTCTTCTTCTCCCTCTCACTCTTGAACTCTCCTCCCTCTCCCACTCTATCTTTTTCTGGTTTCTGAGTTTGAATGGAGTTGCTGGCTGTGTTACCAGCTGGGCAAGACTTTAAGTGGAAGGGAAATGACTAAAATGCCCTCCACTTAGCCCTTCACCATAATTTACTCTTAAATAACCGCTAACTCATAATTAACTTCTAAAAATTGTGATTGTGGTCTTATGGAGTTAAGGAATATGTTTTGGTGTTGAGTAATTTGGGTTAGGGTTCGAAAGATATGGAAATGACCAAAATACCCTTGGTTCCCTAATCCTCACATAATTCTATTTCTACCTCAAAACGATCACGTAATTCATACTATTAGCAACTAAATATTGTTTTCACGCTTTTAACATGTCAATGACTTGAATTATTATTTTATCGAATAACAATTCGCTAGTTAATTTCATAAAATGAAATTAACCGAAATTAGGGATGTTACAATAGGTATGTAATCTAAATCATTCATAGAATTTTATTGATCTTACGTTCAATTTGGTCGTTGTCTTGGTGAGGGAGTTAATTAATACTTCACCCTAGAAGTCACCTTAAAATTAATAATTTATTAAGTTAAAATAAAATAAAATAAAAAAAATAAACATATTAAGAGTGTGATTACTTCTACGATCCAACTTGGATTTTTGAGAATACGCCATTAGAGTAAAATTCTTATAGAGTTATTTTCTTTACCAAATCATATAGTTCTTAAGTAGTGTATTTTTGAGTAATTTATATTTCAGGAAAAAACTTAATTGTTTAAATACGTGTAGTTTGTTCCACAATAACCGTTTTGATGAAAAGAAAAATAAATTCCATGACTAAGTACGTAAAGTGCAATTCTAAGGAGTGTGTTTTGGGGTATTTTAAAGTCTGTAAAAAGTTTTAGATATTCAAATACTCCAAGTTCGTTTCTCAATAATCAGTTTGGTGAGAAAAAATCATGTGTCAAAATATGTAAAGTGTGATACTAAACAATGTGTTTTGGGGTATCTTAGAATATAGAAAAAAATTAGATGTTCAAATACACAAAGTCTGTTCCTCAATAATTAGTTTGTTATCCAAAATGATATATTTTTGTCACAAAATACGTAAAATGTGATGCTAACTAATTTATTTTGGGTTATTAAATTATGTATTTTACAATGGAACACTCCTTGTCAAAAAATAGAACACTCCATCATAATATTTGCATTAATATTTGCATTTAAAATAGAACACGTGTGTTAGAACTAGTTCCATATGTCTCTGTCTTGCGGTCCTTCCTTTTAGTTCCACACACCAGTTTCAAACAGTTCTTTGTAATCCAAAGTTTCATACTTTTCTTCTTCTTTACTCTCACAGATCACAGTACTAGTACTAGCAGCAACATCAACCCGCATTTCCGTCGTAACTCGTAACAAACCACACACCCACTTGCTGTTTATATCTCTGCGAC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00056.26	Ldh_1_N	39	177	2.30E-41
PF02866.21	Ldh_1_C	180	343	1.80E-25

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0006089	lactate metabolic process	Biological Process
GO:0005737	cytoplasm	Cellular Component
GO:0006090	pyruvate metabolic process	Biological Process
GO:0016020	membrane	Cellular Component
GO:0009737	response to abscisic acid	Biological Process

InterPro

InterPro term	Description
IPR036291	NAD(P)-binding domain superfamily
IPR001557	L-lactate/malate dehydrogenase
IPR018177	L-lactate dehydrogenase, active site
IPR011304	L-lactate dehydrogenase
IPR001236	Lactate/malate dehydrogenase, N-terminal
IPR022383	Lactate/malate dehydrogenase, C-terminal
IPR015955	Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal

trEMBL

trEMBL term	Description
G7JIY5	_

SwissProt

SwissProt term	Description
LDHA_HORVU	L-lactate dehydrogenase A

KEGG

KO	Description	Enzyme
K00016	L-lactate dehydrogenase	[EC: 1.1.1.27]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G17260	Lactate/malate dehydrogenase family protein
Medicago sativa L.	MsG0080049027.01.T01	_
Oryza sativa L.	LOC_Os02g01510.1	lactate/malate dehydrogenase, putative, expressed
Cucumis sativus L.	Csa024086	_
Glycyrrhiza uralensis Fisch.	Glyur000939s00023542.1	_
Codonopsis lanceolata	Cl_chr02_40360T	_
Arachis hypogaea L.	AH01G15120.1	L-lactate dehydrogenase A like

Expression pattern