Detail information of Am01G024420.1 Annotation
Gene IDAnnotation
Am01G024420.1 homeobox protein 2
Network
Network CategoryRelationship Type
Global NetworkProtein-Protein interaction + Coexpression Positive and Negative
Top300 PCCCoexpression PositiveCoexpression Negative
Location (JBrowse)
GeneTypeChrStartEndStrand
Am01G024420.1mRNAChr01159670012159671881-

Sequences
CDS:
Protein:
Promoter(3k):

Pfam domain
Pfam accessionPfam nameProtein startProtein endE-value
PF04618.15HD-ZIP_N21073.70E-33
PF00046.32Homeodomain1331877.00E-17
PF02183.21HALZ1892237.30E-12
Gene family
Gene familySubfamily
Transcription Factors FamilyHB-HD-ZIP
Transcription Factors FamilyHB-WOX

Gene Ontology
GO termDescriptionCategory
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specificMolecular Function
GO:0006357regulation of transcription by RNA polymerase IIBiological Process
GO:0005634nucleusCellular Component
GO:0043565sequence-specific DNA bindingMolecular Function

InterPro
InterPro termDescription
IPR003106Leucine zipper, homeobox-associated
IPR009057Homeobox-like domain superfamily
IPR017970Homeobox, conserved site
IPR001356Homeobox domain
IPR000047Helix-turn-helix motif
IPR006712HD-ZIP protein, N-terminal

trEMBL
trEMBL termDescription
A0A8B8JYA9 _

SwissProt
SwissProt termDescription
HAT4_ARATHHomeobox-leucine zipper protein HAT4

KEGG
KODescriptionEnzyme
K09338homeobox-leucine zipper protein

Orthologous genes
SpeciesGene IDAnnotation
Arabidopsis thalianaAT4G16780 homeobox protein 2
Medicago sativa L.MsG0580024545.01.T01 _
Oryza sativa L.LOC_Os09g27450.1homeobox associated leucine zipper, putative, expressed
Cucumis sativus L.Csa017141 _
Glycyrrhiza uralensis Fisch.Glyur000067s00006340.1 _
Codonopsis lanceolataCl_chr03_24300T _
Arachis hypogaea L.AH05G03030.1Homeobox-leucine zipper protein HAT2 like

Expression pattern