Gene detail

Detail information of Am01G022830.1 Annotation

Gene ID	Annotation
Am01G022830.1	casein kinase alpha 1

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G022830.1	mRNA	Chr01	152885202	152897659	-

Sequences

CDS:

>Am01G022830.1
ATGTGTAATTATCTGTACACATACGTTAAATATGCCCACGAATCTCCAGCACCACTCCTCCGCTTCTTGCTAGTGTGCACCCTTGTTGCCTTGCGTGCGCCGGTTGCGCAACCTCCTAACCTGCGCATCCCCATCGTAACTAACACCACCACTATCCTCCACCAACGCCACAAAGCTCAGATCTCGAGTTCCAATTTCGAAGGCATGTCGAAGGCTCGTGTTTACACCGAGGTGAACGTTATTCGCCCTAAAGAGTATTGGGACTACGAGTCCCTCACTGTCCAATGGGGTGATCAAGATGATTATGAAGTTGTACGAAAAGTGGGAAGGGGGAAGTATAGTGAGGTGTTTGAAGGCATAAATGTTAATAGCAATGAGCGCTGTGTAATCAAGATTCTAAAGCCTGTCAAGAAAAAGAAGATCAAAAGAGAGATAAAAATACTTCAGAACCTCTGTGGGGGCCCAAATATTGTCAAGCTTCTTGATATTGTCAGAGATCAGCACTCTAAAACTCCAAGCTTAATATTTGAGTATGTCAACAGTACAGATTTTAAAGTTTTGTATCCAACCTTGACCGATTATGACATACGCTATTACATATATGAGCTGCTTAAGGCCTTAGATTACTGCCATTCTCAAGGCATAATGCATAGAGATGTCAAGCCACATAATGTTATGATTGATCATGAATTACGAAAACTTCGCTTGATAGATTGGGGTCTTGCTGAATTTTATCATCCTGGAAAGGAATACAATGTTCGTGTGGCTTCAAGGTACTTTAAGGGGCCCGAACTTCTAGTTGATTTGCAAGACTATGACTACTCATTAGACATGTGGAGCCTTGGCTGCATGTTTGCTGGAATGATTTTTCGCAAGGAACCTTTCTTTTATGGTCACGACAACCATGATCAGCTTGTTAAAATAGCTAAGGTTCTTGGGACTGATGAACTGAATGCATATCTTAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTAGTTGGAAGGCACAGCCACAAGCCTTGGTCTAAATTTATTAATGCAGATAACCAGCATCTCGTGTCTCCCGAGGCAATTGATTTTCTTGATAAACTCCTTCGATACGACCACCAGGACAGGCTAACTGCAAGAGAAGCAATGGCACATCCGTATTTCTCTCAGGTAAGGGCTGCAGAAAGTAGCAGAATGAGGACACAGTAA

Protein:

Promoter(3k):

>AM01G022830.1
TCATTTTGATTAAATTTTTTTAGTATTGTAATTTCAACAAATCTCTCGGTAATTAGTCACTATTAATTTAATTTGGTATAATAAATAACACTAATCTCATGGGAAAAAATCCACATGAAATAAGCCTAAATTTGTTGTTAATTAGATTGACCTTTATTAATTACATGGGAATCTATTTTTCAAGAATAAAATTGCCTTGAGGGGTGGCAACTATGATATCGTGGTTTGTCATTTCTTATTTCTCCTCTCTATGTTTCCAAACCTTGCACCCCTATTTTTTTTTCTAATAAACCTCTCTCATGTTCTGTTCTTCACATTCAAGTGTTTTCCCTTCCCTCTTAGATTTTAATAATAGTTTATTCTTTTTCTTTTGATATTCGTTATTGCCAATAATAGTTTGAAAAGTTTTTAAGAGCTTCATTTAACGAGCTGATTGCTAAGTATTATGCAATTTCAAGAGAATTGAGGTTGCTTGCTGCACATACCATCCTCAAATGTCAACGTTACCATATCAATAATCATCTCCAATCTACAAATTGGTGAAGAACCATTTATTCTATAAAATCATCTATTATTTTTGCAGTCCATGTTAATTCCTATTTTGATCTCAAAGCCTCTGGATGGTTATTACTCAAATGAAGAGTTAAATGATCTACTAAGTCCATGTTAATTCCTATTTTGATCTCAGAAAGCCTCTGAATGGTTATTACTCAAATGAAGAGTTAAATGATCTATTACAACAATGGGATGTATCAGGTGAGAGGGTCACATTAAAATGAAATGGTTGGAGGGTTTTTACTAATAGTATCAACGGAGAGGGTTTTTATAATGAGTGGGTGAGAGGAGAAAATCATGGCCATATAAAAGTACATGGGTGGCTATGATTGGAAGTTAATTAGTGATCACATGGCCACTTAAAGAAGTCACATAATCTTTGTTTTAATCCTGACCATTCATGTATTGATCTATGAACATCATTGTTTCCTCTCACCCTCTCATTATAAGAATGAATATTAGAGTTGTTTCCTCTCACCCTCTCATTACTATATATATGGTCATACTCTTATGGGAAAAACCCATTCTACATCCATTTTCGTATTCCGCATACACATAATTTGATTTTCAATTGCCAATTAATTCCGCATACACAAGAATTTGAGGAATTTTTATTTTTAAGTGGAAATTTAACACTGTCTGAACTTCATCACCATTACGTTTGTCCACCAAAATTTAATCACCAAACTTATATTTGTTTTATAGTTCATGAATAATGATATCTTTAAAATTTATATTTACACTTTTTCAAAAGAATTTCATTTTATTGTGTTGGCTCGCATTGCTGAAGTTGTTTCCGCTGACGGGTTAAATAATTATTTTTTATTTCTAAATTTCCATTGACTTTCGATTGTGTTGTTTATCTTTGTTAGCCGTTTTCATTGTTTTATAGGTCTGGTCTTCAAATACGAGTCTTTGACCATACAGGTGCAGATGTTTTTGTCCTGATCGACTCTGCCACAATTCAATTCTATATCAAGCATCTCATTGATATGCGTGATCCAACACCTATTAATGTATTATACTTTTATGTATGTCCATTTATACTATACCAGTCTGTATTTTTGGTTGAATTTTTTAATGCAATACATCTTATGTGTATAATGATTAAATCGCAGGAAAATAATCCATTTTAGTTAACTGGACATTTAAATCAGACTTATCTTTTTAAGGTTGTTTGTCGTATCAGCGAGTCTGTCATTCCATTGAATAGATACAATGTGACTAGCATATCTATCGAGAAGGAAGTTATTGATCACTTTCACTATAAAATGGATAAGAAGGCGTATACATCTATTCAATACTTTGCCAAAAAAAATTGGTATAGAATTTCTCACGTCTTACTGATTGTCATGTCTTACTGATTGTCATTTTATATTTTGTTTCCAATGATACATGTTTTTTCCCTACCGTGACTCGTGTCACTCCAATGGATCAGCTACTAATCCAATAGTTGACATCTAAATGCTTATTGATGTAATTTTCAATAGATATTTTCTTTATAATGTTGCATTACACTCACCCTCTCAATAAAACAAATAACATATAGGCCCTAGCAGTTTTTTCATACCAAACCAAATAATAACTTCAGACTACAACAATGGGCATAGTATAAGTATTTTTTATCCACAGACATTGAACCAACATTTGTTTAAGTTCAGATACTTTACTACTTTTATTTATTATTTAATTAAAATATCACTATCATCAAATAAGACTCAATGCGTACAGTCAAAAAGATCAAGTAAAACTCATATTTTTTACACAAAAAAATAATACTCATCTTTAACATGCCAATATGTGAATATATACCCGTGCATGACACGGGTTACTCACACTAGTTAAAAACAATTATAAACATAACACCATAAAAGAGTATCCAACACATGTCATATCAATGTAACATGTACAAGTGTCCGACTCTGACACGAACACGAGACAATCAGAAGAGAGGTGTCCCTCCTTCAGGGTGTGTTTGGTAGAAGAAAAAGAAGAAAAAGAGAAAAAGATAAAAGAGAATGTCTTTCTATTGTTACACACTCCCTAATCTCTTTTTCTCTCTTTCGTTCCTATCTCTTCCCTCTTTATCTTCTACCAAACATATCATTTAGTATAAAATAAAATACTAGTTATAAACTAATCTTATAGTTCTAAACTAATCTTATTCCTTTCTCTTTATTCTATTTTCTCTCCTAAATCAAATAATAGAAAACTATTCTCTCTTTCTCTCTTTCCTTTCACTCTCTATTCTACCAAACAGACGCTCATAGTTTTTCGTGGCAAAGAGAGAGGATGATGACATGGACAGTCACAGTTTACGCCCCGCAGGAAAGAAAATGATTTCCAACCCTCCACAAAAAGTTACTCTAAACCCGGCGAACAGAGTATTCTTCTTTTGACCTTTTTTTTCATTTTTTTTTTGAAGAAGTGAGTATGTAATAAAGT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	102	387	4.40E-66
PF07714.20	PK_Tyr_Ser-Thr	104	294	5.80E-19

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:4.5.3:CMGC_CK2

Gene Ontology

GO term	Description	Category
GO:0051726	regulation of cell cycle	Biological Process
GO:0004674	protein serine/threonine kinase activity	Molecular Function
GO:0005524	ATP binding	Molecular Function
GO:0005829	cytosol	Cellular Component
GO:0005634	nucleus	Cellular Component

InterPro

InterPro term	Description
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain superfamily
IPR017441	Protein kinase, ATP binding site
IPR000719	Protein kinase domain
IPR045216	Casein Kinase 2, subunit alpha

trEMBL

trEMBL term	Description
A0AAN9M346	_

SwissProt

SwissProt term	Description
CSK21_ARATH	Casein kinase II subunit alpha-1

KEGG

KO	Description	Enzyme
K03097	casein kinase II subunit alpha	[EC: 2.7.11.1]

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G67380	casein kinase alpha 1
Medicago sativa L.	MsG0880045952.01.T01	_
Oryza sativa L.	LOC_Os07g02350.1	casein kinase II subunit alpha-2, putative, expressed
Cucumis sativus L.	Csa010201	_
Glycyrrhiza uralensis Fisch.	Glyur000814s00023374.1	_
Codonopsis lanceolata	Cl_chr03_23670T	_
Arachis hypogaea L.	AH01G11620.1	Casein kinase II subunit alpha-1 like

Expression pattern