Gene detail

Detail information of Am01G022480.1 Annotation

Gene ID	Annotation
Am01G022480.1	Leucine-rich repeat protein kinase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G022480.1	mRNA	Chr01	151408539	151411961	-

Sequences

CDS:

>Am01G022480.1
ATGAACTTCAACAACACAACAACCTTTTCTCTTCTCTCACTCTTGTTTCTTCTTAGCGTTAACCAATGTTGTGGTCTTAATAAAGACGGTGTTCTCTTACTTTCTTTCAAGTACACCGTTCTCAACGACCCTCTTTTCGTGCTCAAAAACTGGAACTACACCGATGAGAATCCATGTTTATGGAACGGAGTTTCTTGTTCCGCCGTGTTAAGCACAACTAATGGAACCCAAGCCCAAGCCCAGTATCGTGTTACTGGTTTGTCACTACCAAATTCTCAGCTTTTATGTTCTATTCCCTCCGATCTTGGTTCCATTGAGCATTTACAAATTCTTGATCTTTCAAACAATTCAATCAACGGTTCTATTCCTTCTTTGCTTTTTCAACCAAACTCTGAGCTTCGGTTTCTTAATCTTTCCAATAACTTGATAACAGGGGAGATTCCAGAGTCTATAACACAGTTAAAAAATCTTCAGTTTCTTAACCTTTCTGAAAATTCTTTAGTCGGAAAAATCCCCAACAATCTCTCCAACATGCAAAACCTAACCGTTGCTTCCTTTAAAAACAATTACTTGTCTGGTTTTCTTCCTACCGGGTTACGAACTTTGCAGGTTTTAGATCTGTCTTCGAATTTGTTGAACGGGACTCTACCACCTGGTTTCTCCGGAGATTCTATACGTTACTTGAATATCTCATATAACAGATTTTCCAGCGAAATTCCACCGGAGTTTGCCGAGAAGATTCCGAGTAACGCTACTGTTGATCTCTCGTTTAATAATCTCACCGGTGAAATTCCTGATTCTCCAGTTTTGTTGAATCAAGAAACTAAGTCTTTTTCAGGGAATAGTGATCTATGTGGTGAACCAACTAAGAATCAGTGTACTATTCCTTCTACTCAATCTTCTGAACCTAAATCTTCTTCTTCTCCTCCTGCAATTGCTGCAATTCCAAAGCTTGATTCTCCTCCTGAAGAGTCAGCAAGTTCTTCGCAACAAAAAAATAGTGGTCTCAGAAGTGGAACGATTATAGGTATCGTGGTTGGAGATATTGTAGGAATTGGAATCTTGGTCATGGTTTTTGTTTACGTTTACAAGATGAAGAAAAAGAAGGAAGTGGGGAATACAATAAAGAACGAAGCAGCTATTGCAAGAAGTGATAGTTCATCATCAACATCAGAGTCAAAAGGTTTTACAAGGTGGTCGTGTTTGAGGAAAAAACAAGAAGAGGAAGAATCTTCGGAGACACCGAGTTCTTCAGATAGTGACGTGGAAGCAGCAAGAAATGTAAACGGTGTTGAAGATCATAAACAAGGAGAAAACAAAACGGGTACGGGTACGGGTACTCTTGTGATTCTTGACGGTGAAAGAGAGCTTGAGTTAGAAACCCTATTAAAAGCTTCAGCATATATATTAGGAGCTACTGGTTCAAGCATAATGTACAAAGCAGTTCTTGAAGATGGAACATCGTTAGCGGTTCGTAGAATTGGTGAAGGTGGTGTGGAACGGTTCAAAGACTTCGAGAATCAGGTTCGGGTTATAGCTAAACTGGTTCACCCAAATTTGGTTCGTGTTCGTGGTTTCTTTTGGGGTCACGACGAGAAACTCATCATCTACGATTTCGTTCCCAACGGCTGTCTTGCCAATGTCCGTTACAGGAAAGTGGGTTCCTCGCCAAGCCACATACCGTGGGAAGTGAGGGTGAAGATAGCGAAAGGTGTGGCACGTGGGTTAGCTTATCTACACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCAACCAATGTTCTATTGGGCAACGACATGGAGCCCAAGATAGGAGATTTTGGGCTTGAGAGAATAGTAACGGGTGACATAAGTTATAAAGCAGGAGGATCCGCACGTATTTTTGGAAGCAAGAGATCTACAGCTTCACGTGATAGTTTTCAAGATATTACGTTTGGGCCTAGCCCAAGCCCAAGTCCAAGTTCAATAAGCGGTATATCTCCTTACAATGCTCCTGAATCGCTTAGGAACTTGAAGCCTCATCCAAAGTGGGATGTGTACTCATTTGGGGTCATGTTTCTTGAACTGTTAACGGGGAAGATTGTGGTTTTGGATGATATGGGTCAACTGCCTGGGATTATAGTTGAGGATAAGACTCGGGCTTTGAGGATGGTTGACGTGGCAATTCGCGCTGACATGGAAGGTAAGGAGGAGGCTTTGTTGGCTTATTTTAAGTTAGGGTATAGTTGTGTGTCTAGTGTTCCGCAGAAAAGGCCATTGATGAAAGAGGTGTTACAAGTACTTGAGAAGATTCCAACTACTCCTTCTTTATCGACATATTATTATGGCCACTAA

Protein:

Promoter(3k):

>AM01G022480.1
CTGACATATACATCACTAAATTCACCATTAAAAATGTTCTCAATTATTGCAAATTTGTTTTCTCCATTGCTATTAGTGTCCACCTGGTTGGTGTTAACATTTACTAGTCCCATGTTGTTATAAATTTTATCAATTGGTCAGGGGTTGGTATAGATTAGGGGTGTCAATTTTGACCAAACCCCGATTTCCAAGTATTTTAGACAGTGGCGGACTCAGGACCCCGGAGTTAGGGGTGTCAAATTTTTTAAGGCCAGTGTCAAATGGGTGTAAAACTTGGTCTACTAGTGCAATTTAAAATTTTCAGGGGGTTCAAAATTAAAATTTCAGGAGATTTAGGCTATTTATATAAGGTCATAAGTGCAATTTTTTTTTCAGGGGGTTCAATAGTTGAACCCCCTCACTATAAGACAGGTCCGCCACTGATTTTAGATTGGACTCGTTGAATAGAAGTCCTGATAAGATATGAGCCATTTTGACCCAGTCCAATTGGCCCATTGATTGGGGTTGGATCTGATTTTTTTATATTTTCCGTGATTTCCTTTGTTAAAAATTGGGGTGGGCCGGTTCGACTCACTAGCTCAATATTTCGGGTTGGACTACAAAAAACACAGCGTGGTAGAGATAATTGGGCTGGTCCAACCTAGCTTCCTTTTGTGTTTTTGGCCCAGTAGACCGGGTCAGGCTGGCGGCCCAGTTTGATAGGTCTATATAGATATTTTTTTGGTACAAAAACAAAGCTAAAAAAGACAAAAAGAAAATGAAAAGAAACTAGGAACGTTGAAAATAAACTCTAGAAGCATAGGGCATTAGCAAGCCCATGAGGAGGAGAGTCCAAGGAAGTCTAGGTCGAAGAAGAAGTAGCTCTATATAGATATAATATAAGAGTTCAGTAGAATAGCATGGGAACTGCTAGTTTTAATTAAGATGTAGTCACAATCCTAAAACCATTGGTTTAGTGCATCTTAGATCATCTGTTAAACGTTCATATCTAATCTAACTTTTGTTGAAGCTACTTTTAAATTTGGTCATCTAATTCCCCTAACAGTCATGGCCCCAACCTTCTCCTTTCTAGCAGATCTTTAAATATGGGAAGAGAATGTGAATTAAAGAAAAGCAAGTTACATATGCTTTTAAGAGCCTTTTAATTACCTTTTATTCCTAGCGAAGAATAAAAGGGTGGATCTTAATGAAAAAGAAATAAAGCAGCTTTTACTATAGCGCGCCATAAAGCAAAAGTTCCATAAACTTTAGTCTAAATCACCTTTGCCATGTTAATTTATTTAACAATCAGGTATGGACCTTTTGAATCTTGAGTTTGATAATAATGTGACCCTATGTGTGACCTGAAATCCAAATAATTGTACGTAGTTTCTCAAGTCTACAACTACAACAGTTATGTACTACTACTGTACAAGGTCAATTAGAATTTGTGCCACCTTGGAAATAATCAAAAGGCAAATTCACTGTATTTGTTTTCATAGAGATGTAATATAAAGTATAAACGGACAGAAAAAAGGGTCCGGTTGGTTTTTGTCCACCGTCAACATAAAAATCATAGTGGTACATTATTATTTTGCACAGAATCGCAGTACTACATTATTGTCTTGAGCAATCTTCATCACTGTTACGAATCATACACTATAATAGTCATCGATGACTATAAGAAAAAACAAGATATGCCACGCTAATTACAATTTTGTACTATATATACGTATTTATAACCGTTGGCCAGTGGCTTAATATACCTTGAGACTAGGGGTCGACCCGGTGCTTCGGGATTCGATTTCCACAGTGGACAAACTCGGTGTTGGCGAGTGCGAAATTTAATCCTAAACATGAGCAAAGATTAGCCTTTCGTTGAAAGCGTTGGGACACTCGGTAGATAGCCAGCAATGGTCAAAAAAAAATATATACGTATTTATTGTCTCACTTGTAAAACGATGGGGCCATATCTTCTCCCGGTAACCAAATTCAATGTAGGTTGGTCCGTCCTTACTATGCTTGTTCACACATGAAATTTACCCTATTGTCAGTCAAATTGGAAATGGTGTACGTTAAATTGATATCAGATTTTTTCCCCATTAATTAATCCAATAATGCGTTGTGACGGGATAGCAGTTTTGCGTTTTGGGACCCTCTTCATTCAATAATGGTAGTAGTACTACTAAAATTTTCTGATCCGCAAAATAATATCACAATATATATATATATATATATATATATATATATATATATATATATATATATATATTTCCTTTTATGGTCATTTAGCCTCTTCCTTAAAACGTTCTTTCGAATACTAAGAAAGGTGAAAAAATAAGGGTATCCAATTACTGACGGGGTAGATGGAATTAACGTAGAAGAAAACAAATGACAGCCATGTAAGTCTATAATAACAACGTTGTACTATCGTTCATTAACCATTTACCTACAATAAAGTAGCCAATATTTTATACATTAAAAAACAGACTCTGAGATGGAGAATAACATAAATAATTAAAATAATAAAGTCCAGGACATAATTATATTCACTCAGAAATTATAATTGAAGGACTCGTGAAGTCAATAACGAAAGCAAAGCATAGAAAGAAAGTTAGCAAATCTTCAAACTCCACCTGCGTGTCTAGTAGTAGTAGAAAAAGATGCTACATACTCACTCACTTGTTTCATTATTATACAACTCAAGTAGAGAGAGAAGAGAAGAAGAAGTGATGAGCTAGATAGAGAGAGCCATTAACTTATTTCATGCTCAACAATAAATTATGGCAGCATAGGAAAGTACAGAGAGAGCATATTTGTAAGAAATTCAAGTTTTGGTGAGCTGTTATTAATGTCCTTCTTCAGCAACCTCTTTTCCACTTTCACATATTAATTCTTTTATTTTCACATTACATACGCACTAAATGGACCTCTGTCTTCTAGCAATAAATCTCCGTTACTTCACTTCCTTTTCCTTCTCTCACCGTTCGAAATGTTGAATCACTCTGTAAAACTCAAATC

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF00069.28	Pkinase	470	759	2.70E-29
PF07714.20	PK_Tyr_Ser-Thr	485	625	2.80E-27
PF13855.9	LRR_8	107	167	5.10E-12
PF12799.10	LRR_4	132	173	7.30E-11
PF08263.15	LRRNT_2	27	67	2.10E-08

Gene family

Gene family	Subfamily
Protein Kinases Family	PPC:1.9.3:RLK-Pelle_LRR-III

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	Cellular Component
GO:0005874	microtubule	Cellular Component
GO:0005524	ATP binding	Molecular Function
GO:0008017	microtubule binding	Molecular Function
GO:0032440	2-alkenal reductase [NAD(P)+] activity	Molecular Function

InterPro

InterPro term	Description
IPR011009	Protein kinase-like domain superfamily
IPR000719	Protein kinase domain
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR003591	Leucine-rich repeat, typical subtype
IPR032675	Leucine-rich repeat domain superfamily
IPR001611	Leucine-rich repeat

trEMBL

trEMBL term	Description
A0A9D4XD23	_

SwissProt

SwissProt term	Description
Y4372_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At4g37250

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT4G37250	Leucine-rich repeat protein kinase family protein
Medicago sativa L.	MsG0880045916.01.T01	_
Oryza sativa L.	LOC_Os01g33090.1	expressed protein
Cucumis sativus L.	Csa001209	_
Glycyrrhiza uralensis Fisch.	Glyur000975s00029566.1	_
Codonopsis lanceolata	Cl_chr02_31370T	_
Arachis hypogaea L.	AH01G11110.1	Probable LRR receptor-like serine/threonine-protein kinase At4g37250 like

Expression pattern