Gene detail

Detail information of Am01G021440.1 Annotation

Gene ID	Annotation
Am01G021440.1	nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G021440.1	mRNA	Chr01	144638264	144646140	-

Sequences

CDS:

>Am01G021440.1
ATGCATGTAGTTGCACCGTGGAACAACAACATAAGATCTGTACACCCCACACTCGGTCAAATTATAAGAATAAAGCGCGACCTGGTGCGTGAGGCTCTCACTCGTTGGTCTGAGAGTATCATGGAAGTACTTCCTTCTTCGAATGTTCGAAATGCTGGGGCATCCGATAAGTCGAACGACTCGTTAATTAAGCAGACTGATTGCTTAATCTCTAAGAATTCTCTCTCAATTGAGAACATTATTAACAACATAGAGGAAGGAGAATTAACAGTTTCTGAACCTACTTGGCTGGGGGGAGATGAGCCTATGGCAGTGTGGGTTAAGTTGAATGGGAAGTGGCAAAGTGGAATAAAGTGTGAAAGGGCTGACTGGCCATCATCAACATTGAAAGAAAAACCAACTGATGATGGAAAGAAATATATTCTCATTTTTAACCCTAACACAAGCAGTTTTTCTTGGGCGGATATGCTGCTTATTCGACCAATCAACGAGTTTCCGCAACCGAATGAATACGCAACTCATCTAGAAGGACAGGAAACGGCTAACAACTTGACGTCTGCACGACTATTTCTTCTACAGAATCTAACAACTGACATGCTGACTATTGTTGATCAGCTTCATTCAAATGCTTTGGTAGATGCTGCTCGGAACGTGACTATTTGGAAGCAATTCGCAATGGAAGCTTCCCAATGTTATGGATATTCACACATAGGAAGAATGCTTCTGATGCTAAAAAATAGCATTGTGGTGCAATACATCAATGTTGAATGGATACTGCATTCCAGTAACTCTTGGGTTAAAAGATGCCAGAATGCAAATAGCGCAGAATCAGTAGAGCTGCTCAAGGAGGAACTGTTTGATTCAATCTTGTGGAACGATGTAAATGCTCTATGGGGTGCACCGCAACAACCAAGATTAATAGCTTCTGAATGGAAAACTTGGAAACATGATGTAATCAGATGGTTTTCTTCATATTCTCCCTTTGCTAATTACAGAAAAGCCATGCACCAAGCAAGCCATGATCAAGTTCTTAGAAAAAGAGCTAAACTAATGGTTCGCCGTCCAGATACACATGCTACACTCGTCAGAAACATGTGTTTTGAACACACTATTTCTCTTGAGAATGACCCTAGTTTCTCAAAGAATCAGGAACCATTGCAAGCATTAGTAGTTTCTGAGACTCCTAATCAGCCAGATCTTAGCAGCAGCAATATTGCACCTGTGGCGATGGATTTAGTACCGTGTACAGATTCTGAACTTGTCGTTGCAGATATAGATTCTGAAACCTTGCACAACAATGGATTAATGGAGTTGACTCCTGTGGATAAAATTGCTAAAAAGACTAAGAATCCCCAATGTGTTTCTTATATCCCAGCCAAGGGAAGACAGTGTGCGAGATTGGCAACTGGTGGTAATATATACTGCTGTGCGCATTCGCCAACTCGTTCTTTGCATAGAGCTGGAAAAAGTCGTCAAGAACCTGTTACAGTTCTTACTCCATATTGTGGAGGTATAACTGTTGCTGGTACAAAATGTAAGCACCGTTCCGCTCCCGGCTATTCGTTTTGCAAGAAACACTGGAACCAGGATGAAGTTTATCACACTCCAACTTCATCCAATAGAACACGCAAGAGGAAATCTGGTGTTTGCAAAGACATGGTACCAATAGATGCTGAAAATCCACTGCAACTTGTTCATGGTGATTACCTCCTTGAAGGAGACAACTTAAGTTACAATGATGTTTATGCCATTGAGCCACTTCAATGTATAGGCTCGCCTGATGATGGCAATGAGATTGAGGAGGAGGTTTGTTGGGAAGAGCCGAGGTGGCATTTCCTATACTGTGACAAGCATCTACCATGCTGGCTGAGACAATATCATGCCAGAAATCAGAAGATCAGCAAGATAATATCAAAAGATGTGTTCATAGAACTTTTAGGTGAATGCTGCTCATTGAAGCAAAAGGTGCATCTGCATAAAGCTTGTGCTCTTTTTTACAAGCTAATCAGAAGCATTTTGTCAGAAAAAAACACTGTGCCTAAGGAAGTTCAATTCCAATGGGCTTTGAATGAAGCCTCTGAAGAGGAAGGAGTTAGAAATTTTTTTAATAAGTTGGTTCGTGTCGAGAAGGAAAATATGGAATCAGTTTGCGGATTCAGTGGCGACATAGAAAGATCCTTACTCATGGAAGGACCATCTTCTCACCTTCCTTCCACCACTAACGACGACAGTGGTGATGGCGATGCAAATGTGATTAAGTGTAAGATTTGCAGTGTAGAATTTCTTGATGACGAAGCACTTGGTACCCATTGGATGGAGAATCACAAAAAGGAATCACATTGGCTATTCAGAGGTTATGCATGTGCCATTTGTTTGGATTCCTTTACTAACAAGAAAATGTTGGTAAAACATGTTTCAGAGAGACACAATGTAAAATTTGTTGAACACTGCTTGCTCGTTCAATGTATTCCCTGTGGTAGCCATTTGGGAAACGTGGAGGAGTTATGGTTGCATGTTTTGTCAGCTCACCCTGATGAGTTTAAACAACCAAAAGCTCCTAAGCGGAGAACATTGTCTACCAATGAGGGCTCTCTCAAAAAATCTGACCATGAAAAGGAAGCAAACAATTCACAGAAGAAGCCAAGTGGTTCGGGAAAATTTACTTGCAAGCAGTGTGGTTTAAAGTTTAATTTACTACCTGATCTTGGTCGCCATCACCAGGCTGCTCACATGGAGCGAAATCAGGATGGCATGAACTCTGGAAAGAAGACAGGAACACACTTTCAGGCCCAGAGACTAAAATCTAGTAGAGTAAGCCGTCCTACTTTTAAAAAAGTCATGGCAGAAAAATCCAACAAGAGCAAGAGTAGAGCGAATGCTAACTCGAAGAAACGGATTCGGGAAACAAAGTTGCTTGAGGTGGAGGAAACAACCAAACAACCTTATGTAAACGGGACAAATATTGTTGAATTGGAAGAGAATCGAAACTTAGAAATTGCTAAGAATTTGTCCTCTCAGGCTCAAAATAGTACACCTCAGCCTAAAAATCTTGATATTTTGTCAATTGCTCAATCTGCTTGCTGCAAAATTAGTCTTAAAGCCTCATTGGAGGAGAAATATGGAACTATGCCTGAAAATATCTATTTGAAGGCAGTAAAAGTATGCAGTGAGCATGACATTGCCATCAATTGGCATAAGGAGGGGTTTATTTGTCCAAGAGGTTGTATGGTTTCTAAAGACCAAAGGCAGCTTATTCCCCTATTAGAATCTCTTTCTAATGGTTTCCATAATCCAACATCTTTAAGTATATCGAATCCTGCGAGCGATGAGATTGTGCAGGACGAGGTTCACGACGTTGTAAATTCAAACCATCTTGAATTAGACTCATCAGAAAAGGTGGTTGTATTATGTGATGACATAAGCTTTGGGAAGGAATCAGTTCCAGTGGTTTGTGTAGTTGATAAAGAAATCCTAGATTCTCTTCGCAGTCATGAGTCTGATGAGCATCTCTCTAGGCCTTGGGAGAGTTTTACGTATGTTACAAAGCCAATAATGGTTCATCAATCACTGGATCTTTATCCTGAGAGTCAACAACTGAGATGTTCATGCTCATTTTCTACATGCTATCCTGGATATTGTGATCATGTATATCTTTTTGATACTGATTTTGATGATGCAAGAGACATATATGGGGAACCAATGTGTGGCAGGTTCCCATACGCTTACAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTGTATGAGTGTAACCATATGTGCGGATGCGATGCAACCTGTCAAAACAGAATACTGCAGAATGGAATTCGGGTTAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAGGCTATTTCGCGGGGCACATTTGTCTGTGAGTACATAGGAGAGGTCTTAGGAGAACAAGAGGCGCACAAGAGATCCAGAAGATATGGTAAAGAAGATTGCAGTTATATCTATGACATTGATGCTCATGTCAATTATATGAGTAAACTGACTGAAGAACAACCGCGATATGCCATTGATTCTACTCGATATGGGAATGTCTCGAGGTTCATCAATAGCAGTTGCTCACCCAATCTTGTGAGCTACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGTTCACATATTGGTTTTTATGCAAATAGAGATATTGCTATGGGTGAAGAGTTAACATTCAATTATCAGTATGAGCTTGTGCCTGGAGAAGGATCTCCTTGCCTTTGTGGTTCGCCGAAGTGCCGAGGACGCCTTTACTAG

Protein:

>Am01G021440.1
MHVVAPWNNNIRSVHPTLGQIIRIKRDLVREALTRWSESIMEVLPSSNVRNAGASDKSNDSLIKQTDCLISKNSLSIENIINNIEEGELTVSEPTWLGGDEPMAVWVKLNGKWQSGIKCERADWPSSTLKEKPTDDGKKYILIFNPNTSSFSWADMLLIRPINEFPQPNEYATHLEGQETANNLTSARLFLLQNLTTDMLTIVDQLHSNALVDAARNVTIWKQFAMEASQCYGYSHIGRMLLMLKNSIVVQYINVEWILHSSNSWVKRCQNANSAESVELLKEELFDSILWNDVNALWGAPQQPRLIASEWKTWKHDVIRWFSSYSPFANYRKAMHQASHDQVLRKRAKLMVRRPDTHATLVRNMCFEHTISLENDPSFSKNQEPLQALVVSETPNQPDLSSSNIAPVAMDLVPCTDSELVVADIDSETLHNNGLMELTPVDKIAKKTKNPQCVSYIPAKGRQCARLATGGNIYCCAHSPTRSLHRAGKSRQEPVTVLTPYCGGITVAGTKCKHRSAPGYSFCKKHWNQDEVYHTPTSSNRTRKRKSGVCKDMVPIDAENPLQLVHGDYLLEGDNLSYNDVYAIEPLQCIGSPDDGNEIEEEVCWEEPRWHFLYCDKHLPCWLRQYHARNQKISKIISKDVFIELLGECCSLKQKVHLHKACALFYKLIRSILSEKNTVPKEVQFQWALNEASEEEGVRNFFNKLVRVEKENMESVCGFSGDIERSLLMEGPSSHLPSTTNDDSGDGDANVIKCKICSVEFLDDEALGTHWMENHKKESHWLFRGYACAICLDSFTNKKMLVKHVSERHNVKFVEHCLLVQCIPCGSHLGNVEELWLHVLSAHPDEFKQPKAPKRRTLSTNEGSLKKSDHEKEANNSQKKPSGSGKFTCKQCGLKFNLLPDLGRHHQAAHMERNQDGMNSGKKTGTHFQAQRLKSSRVSRPTFKKVMAEKSNKSKSRANANSKKRIRETKLLEVEETTKQPYVNGTNIVELEENRNLEIAKNLSSQAQNSTPQPKNLDILSIAQSACCKISLKASLEEKYGTMPENIYLKAVKVCSEHDIAINWHKEGFICPRGCMVSKDQRQLIPLLESLSNGFHNPTSLSISNPASDEIVQDEVHDVVNSNHLELDSSEKVVVLCDDISFGKESVPVVCVVDKEILDSLRSHESDEHLSRPWESFTYVTKPIMVHQSLDLYPESQQLRCSCSFSTCYPGYCDHVYLFDTDFDDARDIYGEPMCGRFPYAYNGRIILEEGYLVYECNHMCGCDATCQNRILQNGIRVKLEVFKTEKKGWAVRAGEAISRGTFVCEYIGEVLGEQEAHKRSRRYGKEDCSYIYDIDAHVNYMSKLTEEQPRYAIDSTRYGNVSRFINSSCSPNLVSYQVLVESMDCERSHIGFYANRDIAMGEELTFNYQYELVPGEGSPCLCGSPKCRGRLY*

Promoter(3k):

>AM01G021440.1
AAAAAATATAAGGTCTTGCCGGGCAATCCAAGTGATGGCGAATGGTATTGTACGGACGATGACACTTCACAAAATTCACCTCTCTCTAATAAATTCCTGGATCCATGCCTACTTTTAGTAAATCATTGCTCATAACCACGAGTGCATCCAAAGGTGACCTATTGGCCGATCATTGATGATCTAAAATAGTTTTCTTTCAATTTAAGGCGAAACTTTATAATACCCCGATCTCCAAATGGCTGTGAAAGATTATGAGAGAAGTGTACCTTTTTGCCTCGGCCAGAGTTGAGGGGTGCCATTATTCTCAATAATGACGTGCCCTAATCTTTCCATTCAAAGAATGAATTCACGAGGAGAGACCTCCTTGTGTAAGGCTTTTGATGACTTGATATTTTGGGTAGGCCTACCATTCTAATTAATAGTTAGAGATGCAGTGGGATTAGAAGAATCAATAGCAGCAGTAAAAATGAGAATGAATGCCAATTAGTTTAGGGTTTAGGGTTTAGAGTTTAAGGTCTCAATAAAATACCACCGGAGAGGATTGAAAGCCTTTCTTTTTTCAAAATCTAGCTGAGGATCATAAAGCCTTTCTTTCTACGCATGTTGGACTAGGAATGAATGACTTCTCGAATAACCTAAATATTGTAAGGCATAATGCTCCTTGTTAGGCATACAACTATTTTGCTATATTTTTATTTTCACATTTGTTCGCAACATAGTATGACAAGGAGCATTTAAAACCCTATTTTAGTCGCAAAGTTAATGAGCCTACCGAATTTATGCTCGTTGTTTCATTACGATGCTCGACTCTCCTTGCACTAAATGGATGATTTATATGACCAACCCTAATCCTTCCAAACTCTCTATTCTTATTACGTCATCTTCAGTTACACATACTTCCAAACTGGTTACTTTTTTATATACGTATATTTTTAACTTGCACGTATTCCCTAAAAGAATAACTATCTGGATTTTCTTTTTATCTATATCTACTAATAAAGAACGTTGATACTCCATCCAATATCGTTTATAAGCAAAAAAAACACTTATTAAATTCATTGAATAACTGATGTATCTAGTCTATGATATAGACCAGATACAAATAAACTTAAAAAGTGTTTTTTGCTTATAAATGAGACCGGTGTTGTATTTTGTTGTATCATAACAATCTAAGTTACTAACATCATCTAGGCTTTTTGACCATCCTCACCCGAAAAGAAAAAGGAAACTAAAAAATATCACGAATCTTACAAAAACAATAGTATATTATAACAAATAATAACGATTAATGTTTCTTTTAAATAGTATATTAGGCGACATTACTGAACTAAGGTGTTACCTCCCCCAGTGTCTTTTCCACCTGAAGTCTGTTGCTCCTAACCCAACTTAGGTCAATACCTTACCTCACTCAACTAGTATTTTCTCTAGTAACGCATCCTTCCATCTTTTTTGATATACATGTATTTACACTTTTAATACCCTTATTTTATGCCATTGACTCTACCAAAAACCTCTATTCTTTTTTGCCCAAAATATAATTTCTTTTACATGAAAATAAAATATAATTGTTAATTTTTATACATTTTAATATTAATATTTCTATATTTCAATTCCTCCTTTCACCTTACACTACCCTTACACGTTTCAATTCTTTGTCTAAATCCAAATCCACAATTTTTTTTTTACCAAAAAAGCCCCACAAAGGATAGAATAAAAAATAAAAAACAAAAATAATAAAAATATAACCTAGAGGTATTAATGCTTCAATTTGGGCACGAGACCTAGGCTGGCCACCTAGCCCTATTTCCCCCTATAAATTTCATATTTTCATTCTAGCAACTCACACAACATTTTTCATAGTGAGTGAGTGAAACGGCGCATCACAACATTTTTCATATACAATAAGCTCTAAATTACCAACTCACCAGTCACCATCCTCATAGACCCCTAGATCTCTCTATTTCTCTTTCTCTTCATAACCTTCCCACCTCATTTTTAAAGGTACCTTATTACCACTAACCCCTTTTTCATGTTCCCTATATTTTCTATATTTTTTGCTTAGCCAATTTTTCTATGTCTGTCTAATTTATGTTACATTACAATTTGCATATATTTTGCCTGTCAATTTTGCTTCAGTTTCATGGATCTCTACCTATCTATCATCCTAGCATAGTCGTGTACTTTTTGCAGATAAAAAAAATCTTTTACGTAAATTAAAAAGACGTGCTAATTATTGCAAGAGGAAGCACTTCTTTCTCTTTAATATATATAGATATAATCGATACCCAATTTTTTCACTACGCAGATCGTTTTCAATTTTATTTTTTTAAATAAATTTTCAGACAAGCAGTTATTGATCGTGAGTTTTGATCGGATCTTTAGTCGATCTATTTTTTAGACATGATCTCTAGTCGATCTTCCATTTTATGAACTTGATTAGGGTTTATATTCAATATTTAATTAGATCTTTTTTTTTGAGACAATTTTATTAGATCTTTTATCACTTAGGGTTTATGACGATTAGATTTCAATCTGGCTGCGTTTTGTGTCGTTTTGATTTTTTAAAAGCTTAAAGATTTAAGCTTTGTTCATCGTTCTTTCAAAATATTTATTGCGATTTATGGTTATTGGAGCCTAGATCATTTGATTTCCAAAGAGGGGGTGATTTTGGATATTAATGCAGTTAATTTGTCCAATGTTAACTAACAAAAAAAAAGAAGTCACTAGTTTTACTGTTTCTTCTTTGTTGGATTTTTTTTCTTCCAAAAGCATCTTTTGAGTCCAAAATTTTTATCCTATCAATAGATTTTGCATTTACACTTCAAAGGTGAATAAGTCTATCTGGACTCTCTAGAATGAATGTCGCACGGGTTGTTTTGCTTGAATTTTAGCTTATGTTAGATCTTATGTTGCCACTGCACGGTGTGACGACGTGCAGACTCATCTGACATAGAGAGATACAATTATGAGATACAATTATTCTCTCTAGATCTAACGATT

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF18868.4	zf-C2H2_3rep	788	911	4.20E-53
PF00856.31	SET	1289	1409	3.10E-19
PF05033.19	Pre-SET	1140	1270	3.30E-12

Gene family

Gene family	Subfamily
Transcription Factors Family	SET
Epigenetic Regulators	SDG6

Gene Ontology

GO term	Description	Category
GO:0005634	nucleus	Cellular Component
GO:0032259	methylation	Biological Process
GO:0008270	zinc ion binding	Molecular Function
GO:0010629	negative regulation of gene expression	Biological Process
GO:0043565	sequence-specific DNA binding	Molecular Function

InterPro

InterPro term	Description
IPR013087	Zinc finger C2H2-type
IPR040689	SUVR5, C2H2-type Zinc finger, 3 repeats
IPR046341	SET domain superfamily
IPR001214	SET domain
IPR007728	Pre-SET domain
IPR003616	Post-SET domain

trEMBL

trEMBL term	Description
A0A371EL63	_

SwissProt

SwissProt term	Description
SUVR5_ARATH	Histone-lysine N-methyltransferase SUVR5

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT2G23740	nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding
Medicago sativa L.	MsG0580024890.01.T01	_
Oryza sativa L.	LOC_Os02g47900.1	SET domain protein SDG117, putative, expressed
Cucumis sativus L.	Csa010273	_
Glycyrrhiza uralensis Fisch.	Glyur000352s00022300.1	_
Codonopsis lanceolata	Cl_chr03_35940T	_
Arachis hypogaea L.	AH01G00920.1	Histone-lysine N-methyltransferase SUVR5 like

Expression pattern