Gene detail

Detail information of Am01G020880.1 Annotation

Gene ID	Annotation
Am01G020880.1	FAD/NAD(P)-binding oxidoreductase family protein

Network

Network Category	Relationship Type
Global Network	Protein-Protein interaction + Coexpression Positive and Negative
Top300 PCC	Coexpression Positive	Coexpression Negative

Location (JBrowse)

Gene	Type	Chr	Start	End	Strand
Am01G020880.1	mRNA	Chr01	137047569	137059044	+

Sequences

CDS:

>Am01G020880.1
ATGTGGCGAAGGACGTTTAGCAGCAGCTGCATAACTGACAGCGCCGCCACATTAAAGAGCAAGAAATGGGACGCGCTGATCATCGGCGGCGGCCACAACGGTCTCACAGCCGCAGCATACCTCGCTCGCGGAGGTCTCTCAGTTGCCGTCCTCGAGCGCCGCCACATCATCGGGGGCGCCGCCGTAACTGAGGAGCTTATTCCAGGCTTCAAATTTTCCCGGTGCAGTTACCTCCAAAGTCTTCTCCGGCCATCGGTAATCAACGAACTGGAGTTAGGAAAGCACGGATTGAAGCTCCTGAAGAGGAATCCGTCGTCGTTTACGCCTTGTCTTGACGGACGCTACCTTCTCTTAGGGCCTGATAAGCAACTCAATCACTCTCAAATTTCTCAGTTCTCACAAGCTGATGCTGAGGCTTATCCAAAATATGAGAGTCAGCTTGAGACCTTCTGTAAATTAATGGATATAGTGCTAGATTCACCTCCACCTGAATCCTTGCAACATAAAGCATCTCTTAATGAACAACTGAAGAATAAAATACAGAATTCAGTATTTTGGGCCAGTTGTTTGCGGCAGGTATCCTCCATGGGGCAAAAGGATATGGTGGACTTTATGGACCTTTTGTTGTCCCCAGCTTCTAAAGTTTTGAATAACTGGTTTGAGGCAGATGTTCTGAAGGCAACACTTGCGACAGATGCTGTGATAGGAACTACAGCCAGTGTCCACACCCCAGGAAGTGGTTATGTTCTGCTACATCATGTAATGGGAGAATCTGATGGAGAGAGAGGAATTTGGTCATATGTTGAAGGTGGAATGGGATCAGTATCCAAGGCTATTGCTAGTGCTGCTACCACAGCTGGAGCACTTGTTGTAACCAATGCTGAGGTGTCTCAGCTGTTGATTGAAAACTCTAGCACTGTTCGTGGGGTAATTCTGGCTGATGGTACTGAAGTGCATGCTTCAGCTGTTCTGTCTAATGCAACACCTTATAGGACATTCATGGAATTAGTGCCCGCCAATGTCCTCCCTGATGATTTTTCTCGTGCAATTAAGCACTCTGACTACAGTTCTGCTACCACAAAAATAAATGTAGCAGTTGATAAATTGCCCCAATTTCGGTGTTGCAACTTAGATAATTCTCATGCTGGCCCACAGCATGTTGGCACAATTCATATAGGTTCAGAAAGCATGGAGGAGATTCACTCAGCATCTCAAGATGCAGTGAATGGAATACCATCAAGAAGACCGGTCATTGAGATGACAATACCCTCTGTGTTGGACAAAACTATATCTCCACCTGGTAAGCATGTGATCAACCTGTTTGTGCAGTATACACCCTACAAACCATTGGATGGTGACTGGCAAGATCATGAATACAGAGAATCATTTGCACAAAAATGCTTCACATTGATTGATGAATATGCCCCAGGTTTCAGCACATCAGTCATTGGTTATGACATGCTGACTCCACCTGATCTTGAAAGGGAAATCGGTTTGACAGGAGGGAATATATTCCATGGTGCTATGGGTTTGGATTCTCTTTTTCTCACGCGACCTGTAAAAGGATGGTCAAACTATAAGACTCCACTTAAAGGATTATACTTGTGCGGAAGCGGGGCACATCCTGGCGGTGGAGTGATGGGAGCACCCGGACGCAATGCTGCCCATGTAGTTCTTCAGGATGTCAGAAAAACTTGA

Protein:

Promoter(3k):

>AM01G020880.1
ACTCCATCGTCAATCTGAGAAGCTCCCATCAAATAAGAAAACTCATATAGTATTCGTGTTGACATTAATTTCCTGAAAGAAAATTTCCGAAGATCACATGTTTTGAGAAACTGGTTAAAAGTACTCTTTTCACCTTCATACTTAGCTCAGTGTAAGGGTGAAAAGTGTACTTCTATAAACATTACCAGATTATCAATGACCTCTTCTGGTATTTCATGGAAATAAACCTGTCATATAGTCATCATTTTACAATTGTTAGTCAATTTATCTGTGAAGATAAATACCAGTTAATGAATAAAATGTGTCAATAAAACAAGGTAGCTAAAAGACTCGGGGGATGAAATAAAATGTGGTGTGACTTTTCAAGTGAAGAAATAATTTCTTTTCAAATTTTCTTATACTAGCACACACAACTAACAAATCAGTAGCCTCAAAAAAGCATTTTCAGCATCTAATGAAAATGTTATATGGTACTTCCTTAGGAATGTAGATTATACATGAGCTCACATGGTTGAGTGAAAGGGACATCGTTGGTGGAAAAACGTAGGCGTACCGGGTTTGAACCCCGCTCCCCCCTCCCCTCTAACAACTAACACACTAATTTGTAACCACTTAGCCTATCAAAAAAAAAAAAAATACACGAGCTCAAGAAACTGGAACTTGTACCTCTGCACTTTCCCATCCCCCGCAGCGTTTTCCGGTCGTGAGGTTAGTAACAACAACAGATCCAACCACAGCTGCATGACTACCAGAATATCCTGCAATTTTATTCACATTTGTGAATGTTGCTATTATATATATGTGCTTATAATTCCCAACAAGAAAAGGAGGGGACTAAAATTCATACAAACCTTTGACGAATTCTCGTGCTTCTTTTTCACTAGTTGGTTTTTCCCTGATCATTCCTCTATACACCACAACCTACAACACATTTATTTTTAGCAACATGAACAAAGCTTACAAAAGTTTCTACTTCAATCAACAGAAAATCAGTAAAAGTTGACCATATAGGATTGTAAAAGTTTAAGCAGAAGTATTCAGAATGTGAGCTGAGGTGGACAACTGTATCCGTAAGAATAAGTTGGCAGAACCAGAACAGAAATAGAGTAACACAGATATTATCTGTAGAAGAAAAACCAAAGTAATGCCTTTATGGTTTATTCTTATGCAGATAAGTTACCCAGCATTTCAAATCAATGATGTATGAAGCAAAAAGTAAAATAAAATAGGGAAAGAGAGAAAGAATAATGCATACAGTGTCTGCAGTGATTAATAATGTCGCAGAAGCAGAAGCATCTTCCTCCAGTCGACCTTCTGTAAGGAGTCTTTGCACAATAGCATCAGCCTAAAGAAGAATCTCAAAATTAGATTACTAAGGGTATCTTAGAACAATCAATATGTGAGGAGGACTTCAAATTGTTCATAGGCACAACCTCTCAATTCAATTTTATGATACATTTTTCAATTATTTTATTTATTTAGTTTTTTAGAGGAAGTTTCTAGAGGGGGACAAAACAACAGCCTGCAATTTTCTGTATATTCAGTCACAACAGCCAGAAGCAAGACCTTAAATAGATCTTGTATTCTTCCAGTTTCTCAGGTACTCAACCGAGCATCTCATACTACTCGATACGCGATTCAGACACCTCACAATACCCAAAACTCTATCAATATTCACACAAAATTCAAGTATTATAACTCTTTATGTAGGATGGAGATAATGTGAAATTATTCACCAGCCATTAAATAACTATAACTGCCAATTTCACTACATCACTACAGATATGGAGACTCCAATGAAGACAAGTTTATGAATAAAAGAAACAAGTCTAACTGTTTCAATATCAAAAAGGGCCATAGTGCCTAAGAATTCACAATTCACAAAGTCAAATTAAAATAAAATAAAACAGGAAAAAATAGAAAAGAGGAAAGTAAAGAATTGATACCTTTGCCTCAGCTAATGTCACTACCAAATCTTCTGGCTTTTCCCTCCTAATACTTTTCTCATCAATGTCTGCACTCTAATTAAAAAAAAAATCCAAGCTAAACTCTTTCAATCTTTGATCACAATAATAAATTAAAGTAACAAATTTCACACAATAAACAATAACATATATTATAATGTACCATTATTGTGAACTCATATCCCATCTCAGCAAGAATCTCTCTACGAGCCTTTGAAGAAGAGCCCAGAATTATCTGTTGCAAAATAACAAAATCAGATGATTTATATTTTTTGACTTAGCCTTTTAAGAATGTAATATACAAATATGCATCCCTTAAGAAATGAAAATTGGAATTGTCTATTCAGTTATTTATATATCAACAATAATAACAAATATATAGTAAACCTTGGGCGGTTTTATGATACAGAGTTGGTGGATTGATAGATACATGGCTAATGGATTTTACTGCGTTGGATTATGTTAAGGATAAGAAAGGAGAAAAACCTTGAACGATGGAACTTTCTTAGTAGCCATGGCGAATGCGTGTTTTTGAAGCTGTTGGTCGCAGTTGAGATGAGTTATGAGCTGCTGCTTCCCAAAGAAGTGGAGGAACACATCCTATGATATTTAAAGGCCTAAATATGTTCTATCTCCTATTTCTAGAGTATACCTGTTTTTTTTATTTGCATTTTTTAATTTTTTTAGGAGAGTTCTTAGTTTATTATTTTGAATTCTATTTTATAGAATAGAACAATTAAAAAATAAAAAATATTTAGTTCATATTCTACTAATCTTGAATGGTAGAAACAAAAACTAAAAGAAATTAGGCAAAATTGCTTTTATGAGAATGAAAAAGATATTTAAAGTGAAAAATATGAATATTACATAACTATCACATTTTCACCTTTATGTGTGGAGTTATTAAATTCATAAAACTATTGCATTAATGCATTACTACTACTACTAATTGTTACTAGTGTAGTGTTAACAAAAAAAGATCGAAAAATTCACAATTTTAAAGGCAGACAAAACCTCTTTCCATCGCGAAGAAGAA

Pfam domain

Pfam accession	Pfam name	Protein start	Protein end	E-value
PF01593.27	Amino_oxidase	34	367	2.30E-13
PF13450.9	NAD_binding_8	27	72	5.40E-10
PF01266.27	DAO	24	60	2.70E-09
PF01946.20	Thi4	21	61	9.20E-07

Gene family

Gene family	Subfamily
--	--

Gene Ontology

GO term	Description	Category
GO:0005759	mitochondrial matrix	Cellular Component
GO:0016491	oxidoreductase activity	Molecular Function
GO:0005507	copper ion binding	Molecular Function
GO:0009536	plastid	Cellular Component
GO:0016020	membrane	Cellular Component

InterPro

InterPro term	Description
IPR036188	FAD/NAD(P)-binding domain superfamily
IPR002937	Amine oxidase

trEMBL

trEMBL term	Description
G7LES0	_

SwissProt

SwissProt term	Description
PYRD2_BOVIN	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2

KEGG

KO	Description	Enzyme
--	--	--

Orthologous genes

Species	Gene ID	Annotation
Arabidopsis thaliana	AT5G49555	FAD/NAD(P)-binding oxidoreductase family protein
Medicago sativa L.	MsG0880045723.01.T01	_
Oryza sativa L.	LOC_Os12g43590.1	FAD dependent oxidoreductase domain containing protein, expressed
Cucumis sativus L.	Csa016202	_
Glycyrrhiza uralensis Fisch.	Glyur000179s00010707.2	_
Codonopsis lanceolata	Cl_chr03_20100T	_
Arachis hypogaea L.	AH08G23500.1	Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 like

Expression pattern